RNA–Protein interactions for RNA: ENST00000489861.2

COL9A1-209, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 3

Gene COL9A1, Length 243 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-209ENST00000489861 CXCL17Q6UXB2 119 aa8.99□□□□□ -0.97
COL9A1-209ENST00000489861 TBC1D9Q6ZT07 1266 aa8.99□□□□□ -0.97
COL9A1-209ENST00000489861 TGFBRAP1Q8WUH2 860 aa8.99□□□□□ -0.97
COL9A1-209ENST00000489861 ATG4CQ96DT6 458 aa8.99□□□□□ -0.97
COL9A1-209ENST00000489861 MMP19Q99542 508 aa8.99□□□□□ -0.97
COL9A1-209ENST00000489861 ZHX1Q9UKY1 873 aaPredicted RBP8.99□□□□□ -0.97
COL9A1-209ENST00000489861 FLT1P17948 1338 aa8.99□□□□□ -0.97
COL9A1-209ENST00000489861 PDS5AQ29RF7 1337 aaKnown RBP8.99□□□□□ -0.97
COL9A1-209ENST00000489861 MYO10Q9HD67 2058 aa8.98□□□□□ -0.97
COL9A1-209ENST00000489861 A0A1W2PRG0 241 aa8.98□□□□□ -0.97
COL9A1-209ENST00000489861 KIF28PB7ZC32 967 aa8.98□□□□□ -0.97
COL9A1-209ENST00000489861 RBAK-RBAKDNI3L0D1 243 aa8.98□□□□□ -0.97
COL9A1-209ENST00000489861 VAMP4O75379 141 aa8.98□□□□□ -0.97
COL9A1-209ENST00000489861 PFKMP08237 780 aa8.98□□□□□ -0.97
COL9A1-209ENST00000489861 AVPR2P30518 371 aa8.98□□□□□ -0.97
COL9A1-209ENST00000489861 GUCY1A2P33402 732 aa8.98□□□□□ -0.97
COL9A1-209ENST00000489861 ERVK-21P61565 698 aa8.98□□□□□ -0.97
COL9A1-209ENST00000489861 ITGA7Q13683 1181 aa8.98□□□□□ -0.97
COL9A1-209ENST00000489861 TMEM132BQ14DG7 1078 aa8.98□□□□□ -0.97
COL9A1-209ENST00000489861 TATDN1Q6P1N9 297 aa8.98□□□□□ -0.97
COL9A1-209ENST00000489861 PI16Q6UXB8 463 aa8.98□□□□□ -0.97
COL9A1-209ENST00000489861 MB21D1Q8N884 522 aa8.98□□□□□ -0.97
COL9A1-209ENST00000489861 COL26A1Q96A83 441 aa8.98□□□□□ -0.97
COL9A1-209ENST00000489861 RMDN1Q96DB5 314 aa8.98□□□□□ -0.97
COL9A1-209ENST00000489861 TRIM34Q9BYJ4 488 aa8.98□□□□□ -0.97
COL9A1-209ENST00000489861 TANGO6Q9C0B7 1094 aa8.98□□□□□ -0.97
COL9A1-209ENST00000489861 SAP30BPQ9UHR5 308 aaKnown RBP8.98□□□□□ -0.97
COL9A1-209ENST00000489861 ASTN1O14525 1302 aa8.98□□□□□ -0.97
COL9A1-209ENST00000489861 OTOGLQ3ZCN5 2332 aa8.98□□□□□ -0.97
COL9A1-209ENST00000489861 ZFYVE26Q68DK2 2539 aa8.97□□□□□ -0.97
COL9A1-209ENST00000489861 LDHCP07864 332 aa8.97□□□□□ -0.97
COL9A1-209ENST00000489861 CYP2C9P11712 490 aa8.97□□□□□ -0.97
COL9A1-209ENST00000489861 PTGS1P23219 599 aa8.97□□□□□ -0.97
COL9A1-209ENST00000489861 LTBRP36941 435 aa8.97□□□□□ -0.97
COL9A1-209ENST00000489861 PSMC6P62333 389 aa8.97□□□□□ -0.97
COL9A1-209ENST00000489861 COL9A2Q14055 689 aaPredicted RBP8.97□□□□□ -0.97
COL9A1-209ENST00000489861 COL19A1Q14993 1142 aa8.97□□□□□ -0.97
COL9A1-209ENST00000489861 CCDC144BQ3MJ40 725 aa8.97□□□□□ -0.97
COL9A1-209ENST00000489861 ADSSL1Q8N142 457 aa8.97□□□□□ -0.97
COL9A1-209ENST00000489861 SIL1Q9H173 461 aa8.97□□□□□ -0.97
COL9A1-209ENST00000489861 IRF2BPLQ9H1B7 796 aa8.97□□□□□ -0.97
COL9A1-209ENST00000489861 CEP126Q9P2H0 1117 aa8.97□□□□□ -0.97
COL9A1-209ENST00000489861 NLRC5Q86WI3 1866 aa8.96□□□□□ -0.97
COL9A1-209ENST00000489861 FRYLO94915 3013 aa8.96□□□□□ -0.97
COL9A1-209ENST00000489861 LINC01553A4QN01 128 aa8.96□□□□□ -0.98
COL9A1-209ENST00000489861 ACTN1P12814 892 aa8.96□□□□□ -0.98
COL9A1-209ENST00000489861 NBL1P41271 181 aa8.96□□□□□ -0.98
COL9A1-209ENST00000489861 TIMM10P62072 90 aa8.96□□□□□ -0.98
COL9A1-209ENST00000489861 NKX3-2P78367 333 aa8.96□□□□□ -0.98
COL9A1-209ENST00000489861 GSTO1P78417 241 aa8.96□□□□□ -0.98
COL9A1-209ENST00000489861 ZXDAP98168 799 aa8.96□□□□□ -0.98
COL9A1-209ENST00000489861 ACVR2BQ13705 512 aa8.96□□□□□ -0.98
COL9A1-209ENST00000489861 KCTD2Q14681 263 aa8.96□□□□□ -0.98
COL9A1-209ENST00000489861 SMAD2Q15796 467 aaKnown RBP8.96□□□□□ -0.98
COL9A1-209ENST00000489861 MAMDC4Q6UXC1 1216 aa8.96□□□□□ -0.98
COL9A1-209ENST00000489861 EP400NLQ6ZTU2 488 aa8.96□□□□□ -0.98
COL9A1-209ENST00000489861 PABPC5Q96DU9 382 aaKnown RBP8.96□□□□□ -0.98
COL9A1-209ENST00000489861 TGS1Q96RS0 853 aaKnown RBP8.96□□□□□ -0.98
COL9A1-209ENST00000489861 SPC25Q9HBM1 224 aa8.96□□□□□ -0.98
COL9A1-209ENST00000489861 AATFQ9NY61 560 aaKnown RBP eCLIP8.96□□□□□ -0.98
COL9A1-209ENST00000489861 FAM50BQ9Y247 325 aa8.96□□□□□ -0.98
COL9A1-209ENST00000489861 MICAL3Q7RTP6 2002 aa8.95□□□□□ -0.98
COL9A1-209ENST00000489861 FLOT1O75955 427 aa8.95□□□□□ -0.98
COL9A1-209ENST00000489861 SLC25A27O95847 323 aa8.95□□□□□ -0.98
COL9A1-209ENST00000489861 SEPT2Q15019 361 aa8.95□□□□□ -0.98
COL9A1-209ENST00000489861 CLUL1Q15846 466 aa8.95□□□□□ -0.98
COL9A1-209ENST00000489861 ABCB5Q2M3G0 1257 aa8.95□□□□□ -0.98
COL9A1-209ENST00000489861 TCEAL5Q5H9L2 206 aa8.95□□□□□ -0.98
COL9A1-209ENST00000489861 DGLUCYQ7Z3D6 616 aa8.95□□□□□ -0.98
COL9A1-209ENST00000489861 ADGRA1Q86SQ6 560 aa8.95□□□□□ -0.98
COL9A1-209ENST00000489861 RIOX2Q8IUF8 465 aa8.95□□□□□ -0.98
COL9A1-209ENST00000489861 WDR63Q8IWG1 891 aa8.95□□□□□ -0.98
COL9A1-209ENST00000489861 MSL3Q8N5Y2 521 aaKnown RBP8.95□□□□□ -0.98
COL9A1-209ENST00000489861 MRPL38Q96DV4 380 aaKnown RBP8.95□□□□□ -0.98
COL9A1-209ENST00000489861 ASIC4Q96FT7 647 aa8.95□□□□□ -0.98
COL9A1-209ENST00000489861 ALDH8A1Q9H2A2 487 aaPredicted RBP8.95□□□□□ -0.98
COL9A1-209ENST00000489861 MRS2Q9HD23 443 aa8.95□□□□□ -0.98
COL9A1-209ENST00000489861 TRMT13Q9NUP7 481 aaKnown RBP8.95□□□□□ -0.98
COL9A1-209ENST00000489861 RAI14Q9P0K7 980 aa8.95□□□□□ -0.98
COL9A1-209ENST00000489861 HMG20BQ9P0W2 317 aa8.95□□□□□ -0.98
COL9A1-209ENST00000489861 RALYQ9UKM9 306 aaKnown RBP8.95□□□□□ -0.98
COL9A1-209ENST00000489861 NAV1Q8NEY1 1877 aa8.94□□□□□ -0.98
COL9A1-209ENST00000489861 SCN10AQ9Y5Y9 1956 aa8.94□□□□□ -0.98
COL9A1-209ENST00000489861 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.94□□□□□ -0.98
COL9A1-209ENST00000489861 PPP4CP60510 307 aa8.94□□□□□ -0.98
COL9A1-209ENST00000489861 WDR5P61964 334 aaKnown RBP8.94□□□□□ -0.98
COL9A1-209ENST00000489861 DEFB103AP81534 67 aa8.94□□□□□ -0.98
COL9A1-209ENST00000489861 DLX2Q07687 328 aaPredicted RBP8.94□□□□□ -0.98
COL9A1-209ENST00000489861 CERKLQ49MI3 558 aaPredicted RBP8.94□□□□□ -0.98
COL9A1-209ENST00000489861 WWC1Q8IX03 1113 aa8.94□□□□□ -0.98
COL9A1-209ENST00000489861 FGD4Q96M96 766 aa8.94□□□□□ -0.98
COL9A1-209ENST00000489861 C17orf80Q9BSJ5 609 aa8.94□□□□□ -0.98
COL9A1-209ENST00000489861 FTOQ9C0B1 505 aaKnown RBP eCLIP8.94□□□□□ -0.98
COL9A1-209ENST00000489861 KATNBL1Q9H079 304 aa8.94□□□□□ -0.98
COL9A1-209ENST00000489861 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.94□□□□□ -0.98
COL9A1-209ENST00000489861 ADAMTS5Q9UNA0 930 aa8.94□□□□□ -0.98
COL9A1-209ENST00000489861 MYH8P13535 1937 aa8.93□□□□□ -0.98
COL9A1-209ENST00000489861 DNAJC25-GNG10A0A024R161 153 aa8.93□□□□□ -0.98
COL9A1-209ENST00000489861 MBTPS2O43462 519 aa8.93□□□□□ -0.98
COL9A1-209ENST00000489861 GALR2O43603 387 aaPredicted RBP8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms