RNA–Protein interactions for RNA: ENST00000482728.1

SMIM4-204, Transcript of small integral membrane protein 4, humanhuman

TSL 2

Gene SMIM4, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-204ENST00000482728 ASPRV1Q53RT3 343 aa21.49■■□□□ 1.03
SMIM4-204ENST00000482728 MB21D2Q8IYB1 491 aaPredicted RBP21.49■■□□□ 1.03
SMIM4-204ENST00000482728 ANKRD35Q8N283 1001 aa21.49■■□□□ 1.03
SMIM4-204ENST00000482728 DEFB118Q96PH6 123 aa21.49■■□□□ 1.03
SMIM4-204ENST00000482728 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.49■■□□□ 1.03
SMIM4-204ENST00000482728 CCPG1Q9ULG6 757 aa21.49■■□□□ 1.03
SMIM4-204ENST00000482728 ZNFX1Q9P2E3 1918 aaKnown RBP21.49■■□□□ 1.03
SMIM4-204ENST00000482728 CACNB2Q08289 660 aaPredicted RBP21.48■■□□□ 1.03
SMIM4-204ENST00000482728 OLFML2BQ68BL8 750 aa21.48■■□□□ 1.03
SMIM4-204ENST00000482728 U2AF1L4Q8WU68 220 aaKnown RBP21.48■■□□□ 1.03
SMIM4-204ENST00000482728 TRERF1Q96PN7 1200 aa21.48■■□□□ 1.03
SMIM4-204ENST00000482728 UBA5Q9GZZ9 404 aa21.48■■□□□ 1.03
SMIM4-204ENST00000482728 RANBP17Q9H2T7 1088 aaKnown RBP21.48■■□□□ 1.03
SMIM4-204ENST00000482728 RNF146Q9NTX7 359 aa21.48■■□□□ 1.03
SMIM4-204ENST00000482728 FLRT1Q9NZU1 646 aa21.48■■□□□ 1.03
SMIM4-204ENST00000482728 PNMA2Q9UL42 364 aa21.48■■□□□ 1.03
SMIM4-204ENST00000482728 ZNF536O15090 1300 aa21.48■■□□□ 1.03
SMIM4-204ENST00000482728 PRC1O43663 620 aa21.47■■□□□ 1.03
SMIM4-204ENST00000482728 DHX16O60231 1041 aaKnown RBP21.47■■□□□ 1.03
SMIM4-204ENST00000482728 SGPL1O95470 568 aa21.47■■□□□ 1.03
SMIM4-204ENST00000482728 TFRCP02786 760 aaKnown RBP21.47■■□□□ 1.03
SMIM4-204ENST00000482728 ICAM1P05362 532 aa21.47■■□□□ 1.03
SMIM4-204ENST00000482728 CYP2C19P33261 490 aa21.47■■□□□ 1.03
SMIM4-204ENST00000482728 GJA8P48165 433 aa21.47■■□□□ 1.03
SMIM4-204ENST00000482728 ANTXR2P58335 489 aa21.47■■□□□ 1.03
SMIM4-204ENST00000482728 MAP3K21Q5TCX8 1036 aa21.47■■□□□ 1.03
SMIM4-204ENST00000482728 CATIPQ7Z7H3 387 aa21.47■■□□□ 1.03
SMIM4-204ENST00000482728 IGDCC4Q8TDY8 1250 aa21.47■■□□□ 1.03
SMIM4-204ENST00000482728 MTA3Q9BTC8 594 aa21.47■■□□□ 1.03
SMIM4-204ENST00000482728 ACAD9Q9H845 621 aa21.47■■□□□ 1.03
SMIM4-204ENST00000482728 PAK6Q9NQU5 681 aaPredicted RBP21.47■■□□□ 1.03
SMIM4-204ENST00000482728 DIS3Q9Y2L1 958 aaKnown RBP21.47■■□□□ 1.03
SMIM4-204ENST00000482728 CAPN2P17655 700 aa21.46■■□□□ 1.03
SMIM4-204ENST00000482728 KRT32Q14532 448 aa21.46■■□□□ 1.03
SMIM4-204ENST00000482728 TMTC2Q8N394 836 aa21.46■■□□□ 1.03
SMIM4-204ENST00000482728 MAML3Q96JK9 1138 aa21.46■■□□□ 1.03
SMIM4-204ENST00000482728 TMEM87BQ96K49 555 aa21.46■■□□□ 1.03
SMIM4-204ENST00000482728 ZNF792Q3KQV3 632 aa21.45■■□□□ 1.02
SMIM4-204ENST00000482728 NFXL1Q6ZNB6 911 aa21.45■■□□□ 1.02
SMIM4-204ENST00000482728 NEK1Q96PY6 1258 aa21.45■■□□□ 1.02
SMIM4-204ENST00000482728 CPVLQ9H3G5 476 aa21.45■■□□□ 1.02
SMIM4-204ENST00000482728 VAT1LQ9HCJ6 419 aa21.45■■□□□ 1.02
SMIM4-204ENST00000482728 KLRF2D3W0D1 207 aa21.44■■□□□ 1.02
SMIM4-204ENST00000482728 CNGA1P29973 690 aa21.44■■□□□ 1.02
SMIM4-204ENST00000482728 TSGA10IPQ3SY00 556 aa21.44■■□□□ 1.02
SMIM4-204ENST00000482728 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.44■■□□□ 1.02
SMIM4-204ENST00000482728 RASEFQ8IZ41 740 aa21.44■■□□□ 1.02
SMIM4-204ENST00000482728 ADGRF4Q8IZF3 695 aa21.44■■□□□ 1.02
SMIM4-204ENST00000482728 SENP2Q9HC62 589 aa21.44■■□□□ 1.02
SMIM4-204ENST00000482728 CCND3P30281 292 aaPredicted RBP21.43■■□□□ 1.02
SMIM4-204ENST00000482728 TINF2Q9BSI4 451 aa21.43■■□□□ 1.02
SMIM4-204ENST00000482728 RBBP6Q7Z6E9 1792 aaKnown RBP21.43■■□□□ 1.02
SMIM4-204ENST00000482728 ZNF236Q9UL36 1845 aa21.43■■□□□ 1.02
SMIM4-204ENST00000482728 DNAJC25-GNG10A0A024R161 153 aa21.42■■□□□ 1.02
SMIM4-204ENST00000482728 CCDC69A6NI79 296 aa21.42■■□□□ 1.02
SMIM4-204ENST00000482728 POTEB2H3BUK9 544 aa21.42■■□□□ 1.02
SMIM4-204ENST00000482728 PFASO15067 1338 aa21.42■■□□□ 1.02
SMIM4-204ENST00000482728 GRM4Q14833 912 aa21.42■■□□□ 1.02
SMIM4-204ENST00000482728 NSMFQ6X4W1 530 aa21.42■■□□□ 1.02
SMIM4-204ENST00000482728 STAG2Q8N3U4 1231 aa21.42■■□□□ 1.02
SMIM4-204ENST00000482728 NUP133Q8WUM0 1156 aa21.42■■□□□ 1.02
SMIM4-204ENST00000482728 LY9Q9HBG7 655 aa21.42■■□□□ 1.02
SMIM4-204ENST00000482728 GPHNQ9NQX3 736 aaPredicted RBP21.42■■□□□ 1.02
SMIM4-204ENST00000482728 PDE4DIPQ5VU43 2346 aa21.41■■□□□ 1.02
SMIM4-204ENST00000482728 WDR19Q8NEZ3 1342 aa21.41■■□□□ 1.02
SMIM4-204ENST00000482728 PALM3A6NDB9 673 aaPredicted RBP21.41■■□□□ 1.02
SMIM4-204ENST00000482728 SH2B2O14492 632 aaPredicted RBP21.41■■□□□ 1.02
SMIM4-204ENST00000482728 IGHA2P01877 340 aa21.41■■□□□ 1.02
SMIM4-204ENST00000482728 HMGB1P09429 215 aaKnown RBP21.41■■□□□ 1.02
SMIM4-204ENST00000482728 TROAPQ12815 778 aa21.41■■□□□ 1.02
SMIM4-204ENST00000482728 CDC37Q16543 378 aaPredicted RBP21.41■■□□□ 1.02
SMIM4-204ENST00000482728 MUM1L1Q5H9M0 696 aa21.41■■□□□ 1.02
SMIM4-204ENST00000482728 DHX32Q7L7V1 743 aaKnown RBP21.41■■□□□ 1.02
SMIM4-204ENST00000482728 MSL3Q8N5Y2 521 aaKnown RBP21.41■■□□□ 1.02
SMIM4-204ENST00000482728 SHISA4Q96DD7 197 aa21.41■■□□□ 1.02
SMIM4-204ENST00000482728 CRISPLD2Q9H0B8 497 aa21.41■■□□□ 1.02
SMIM4-204ENST00000482728 JMJD4Q9H9V9 463 aa21.41■■□□□ 1.02
SMIM4-204ENST00000482728 A1CFQ9NQ94 594 aaKnown RBP21.41■■□□□ 1.02
SMIM4-204ENST00000482728 MAD2L2Q9UI95 211 aa21.41■■□□□ 1.02
SMIM4-204ENST00000482728 HSPA4P34932 840 aa21.4■■□□□ 1.02
SMIM4-204ENST00000482728 LIFRP42702 1097 aa21.4■■□□□ 1.02
SMIM4-204ENST00000482728 USH1GQ495M9 461 aa21.4■■□□□ 1.02
SMIM4-204ENST00000482728 PRAMEF19Q5SWL8 479 aa21.4■■□□□ 1.02
SMIM4-204ENST00000482728 ZNF654Q8IZM8 581 aa21.4■■□□□ 1.02
SMIM4-204ENST00000482728 CTCFLQ8NI51 663 aaPredicted RBP21.4■■□□□ 1.02
SMIM4-204ENST00000482728 LRRC2Q9BYS8 371 aa21.4■■□□□ 1.02
SMIM4-204ENST00000482728 CNPY2Q9Y2B0 182 aa21.4■■□□□ 1.02
SMIM4-204ENST00000482728 SMCHD1A6NHR9 2005 aa21.39■■□□□ 1.02
SMIM4-204ENST00000482728 EPB41L2O43491 1005 aaKnown RBP21.39■■□□□ 1.01
SMIM4-204ENST00000482728 MSCO60682 206 aa21.39■■□□□ 1.01
SMIM4-204ENST00000482728 DDAH1O94760 285 aa21.39■■□□□ 1.01
SMIM4-204ENST00000482728 CYBAP13498 195 aa21.39■■□□□ 1.01
SMIM4-204ENST00000482728 TAL1P17542 331 aaPredicted RBP21.39■■□□□ 1.01
SMIM4-204ENST00000482728 KIF5BP33176 963 aa21.39■■□□□ 1.01
SMIM4-204ENST00000482728 ADCK5Q3MIX3 580 aa21.39■■□□□ 1.01
SMIM4-204ENST00000482728 SYNE3Q6ZMZ3 975 aa21.39■■□□□ 1.01
SMIM4-204ENST00000482728 ZNF467Q7Z7K2 595 aaPredicted RBP21.39■■□□□ 1.01
SMIM4-204ENST00000482728 TRPV1Q8NER1 839 aa21.39■■□□□ 1.01
SMIM4-204ENST00000482728 NRBP1Q9UHY1 535 aa21.39■■□□□ 1.01
SMIM4-204ENST00000482728 SLC12A7Q9Y666 1083 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms