RNA–Protein interactions for RNA: ENST00000470581.1

SEMA3C-207, Transcript of semaphorin 3C, humanhuman

TSL 3

Gene SEMA3C, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3C-207ENST00000470581 TMEM67Q5HYA8 995 aa28.89■■■□□ 2.22
SEMA3C-207ENST00000470581 MFSD14CQ5VZR4 134 aa28.89■■■□□ 2.22
SEMA3C-207ENST00000470581 CHST13Q8NET6 341 aa28.89■■■□□ 2.22
SEMA3C-207ENST00000470581 XRN2Q9H0D6 950 aaKnown RBP eCLIP28.89■■■□□ 2.22
SEMA3C-207ENST00000470581 HOMER2Q9NSB8 354 aa28.89■■■□□ 2.22
SEMA3C-207ENST00000470581 PGK2P07205 417 aa28.88■■■□□ 2.21
SEMA3C-207ENST00000470581 PARP1P09874 1014 aaKnown RBP28.88■■■□□ 2.21
SEMA3C-207ENST00000470581 MAP3K21Q5TCX8 1036 aa28.88■■■□□ 2.21
SEMA3C-207ENST00000470581 DDX11Q96FC9 970 aa28.88■■■□□ 2.21
SEMA3C-207ENST00000470581 ALAS1P13196 640 aa28.87■■■□□ 2.21
SEMA3C-207ENST00000470581 MCM5P33992 734 aa28.87■■■□□ 2.21
SEMA3C-207ENST00000470581 GJA8P48165 433 aa28.87■■■□□ 2.21
SEMA3C-207ENST00000470581 TKFCQ3LXA3 575 aa28.87■■■□□ 2.21
SEMA3C-207ENST00000470581 OLFML2BQ68BL8 750 aa28.87■■■□□ 2.21
SEMA3C-207ENST00000470581 IGDCC4Q8TDY8 1250 aa28.87■■■□□ 2.21
SEMA3C-207ENST00000470581 DEFB118Q96PH6 123 aa28.87■■■□□ 2.21
SEMA3C-207ENST00000470581 UBA5Q9GZZ9 404 aa28.87■■■□□ 2.21
SEMA3C-207ENST00000470581 PAK6Q9NQU5 681 aaPredicted RBP28.87■■■□□ 2.21
SEMA3C-207ENST00000470581 CCPG1Q9ULG6 757 aa28.87■■■□□ 2.21
SEMA3C-207ENST00000470581 PRC1O43663 620 aa28.86■■■□□ 2.21
SEMA3C-207ENST00000470581 ICAM1P05362 532 aa28.86■■■□□ 2.21
SEMA3C-207ENST00000470581 ANKRD35Q8N283 1001 aa28.86■■■□□ 2.21
SEMA3C-207ENST00000470581 U2AF1L4Q8WU68 220 aaKnown RBP28.86■■■□□ 2.21
SEMA3C-207ENST00000470581 TRERF1Q96PN7 1200 aa28.86■■■□□ 2.21
SEMA3C-207ENST00000470581 CPVLQ9H3G5 476 aa28.86■■■□□ 2.21
SEMA3C-207ENST00000470581 ACAD9Q9H845 621 aa28.86■■■□□ 2.21
SEMA3C-207ENST00000470581 SENP2Q9HC62 589 aa28.86■■■□□ 2.21
SEMA3C-207ENST00000470581 RNF146Q9NTX7 359 aa28.86■■■□□ 2.21
SEMA3C-207ENST00000470581 REC8O95072 547 aa28.85■■■□□ 2.21
SEMA3C-207ENST00000470581 CYP2C19P33261 490 aa28.85■■■□□ 2.21
SEMA3C-207ENST00000470581 ZNF792Q3KQV3 632 aa28.85■■■□□ 2.21
SEMA3C-207ENST00000470581 DHX30Q7L2E3 1194 aaKnown RBP eCLIP28.85■■■□□ 2.21
SEMA3C-207ENST00000470581 MAML3Q96JK9 1138 aa28.85■■■□□ 2.21
SEMA3C-207ENST00000470581 SGPL1O95470 568 aa28.84■■■□□ 2.21
SEMA3C-207ENST00000470581 RASEFQ8IZ41 740 aa28.84■■■□□ 2.21
SEMA3C-207ENST00000470581 MTA3Q9BTC8 594 aa28.84■■■□□ 2.21
SEMA3C-207ENST00000470581 DIS3Q9Y2L1 958 aaKnown RBP28.84■■■□□ 2.21
SEMA3C-207ENST00000470581 PLXNA1Q9UIW2 1896 aa28.84■■■□□ 2.21
SEMA3C-207ENST00000470581 IGHA2P01877 340 aa28.83■■■□□ 2.21
SEMA3C-207ENST00000470581 COL9A3Q14050 684 aaPredicted RBP28.83■■■□□ 2.21
SEMA3C-207ENST00000470581 SHISA4Q96DD7 197 aa28.83■■■□□ 2.21
SEMA3C-207ENST00000470581 TMEM87BQ96K49 555 aa28.83■■■□□ 2.21
SEMA3C-207ENST00000470581 NEK1Q96PY6 1258 aa28.83■■■□□ 2.21
SEMA3C-207ENST00000470581 DNAJC25-GNG10A0A024R161 153 aa28.82■■■□□ 2.2
SEMA3C-207ENST00000470581 CCND3P30281 292 aaPredicted RBP28.82■■■□□ 2.2
SEMA3C-207ENST00000470581 TSGA10IPQ3SY00 556 aa28.82■■■□□ 2.2
SEMA3C-207ENST00000470581 CATIPQ7Z7H3 387 aa28.82■■■□□ 2.2
SEMA3C-207ENST00000470581 ADGRF4Q8IZF3 695 aa28.82■■■□□ 2.2
SEMA3C-207ENST00000470581 STAG2Q8N3U4 1231 aa28.82■■■□□ 2.2
SEMA3C-207ENST00000470581 LY9Q9HBG7 655 aa28.82■■■□□ 2.2
SEMA3C-207ENST00000470581 GPHNQ9NQX3 736 aaPredicted RBP28.82■■■□□ 2.2
SEMA3C-207ENST00000470581 DHX16O60231 1041 aaKnown RBP28.81■■■□□ 2.2
SEMA3C-207ENST00000470581 TFRCP02786 760 aaKnown RBP28.81■■■□□ 2.2
SEMA3C-207ENST00000470581 TAL1P17542 331 aaPredicted RBP28.81■■■□□ 2.2
SEMA3C-207ENST00000470581 KRT32Q14532 448 aa28.81■■■□□ 2.2
SEMA3C-207ENST00000470581 MUM1L1Q5H9M0 696 aa28.81■■■□□ 2.2
SEMA3C-207ENST00000470581 MAD2L2Q9UI95 211 aa28.81■■■□□ 2.2
SEMA3C-207ENST00000470581 PNMA2Q9UL42 364 aa28.81■■■□□ 2.2
SEMA3C-207ENST00000470581 KLRF2D3W0D1 207 aa28.8■■■□□ 2.2
SEMA3C-207ENST00000470581 GRM4Q14833 912 aa28.8■■■□□ 2.2
SEMA3C-207ENST00000470581 TMTC2Q8N394 836 aa28.8■■■□□ 2.2
SEMA3C-207ENST00000470581 VAT1LQ9HCJ6 419 aa28.8■■■□□ 2.2
SEMA3C-207ENST00000470581 A1CFQ9NQ94 594 aaKnown RBP28.8■■■□□ 2.2
SEMA3C-207ENST00000470581 SMCHD1A6NHR9 2005 aa28.79■■■□□ 2.2
SEMA3C-207ENST00000470581 PALM3A6NDB9 673 aaPredicted RBP28.79■■■□□ 2.2
SEMA3C-207ENST00000470581 SH2B2O14492 632 aaPredicted RBP28.79■■■□□ 2.2
SEMA3C-207ENST00000470581 CNGA1P29973 690 aa28.79■■■□□ 2.2
SEMA3C-207ENST00000470581 HSPA4P34932 840 aa28.79■■■□□ 2.2
SEMA3C-207ENST00000470581 TROAPQ12815 778 aa28.79■■■□□ 2.2
SEMA3C-207ENST00000470581 ADCK5Q3MIX3 580 aa28.79■■■□□ 2.2
SEMA3C-207ENST00000470581 NFXL1Q6ZNB6 911 aa28.79■■■□□ 2.2
SEMA3C-207ENST00000470581 TINF2Q9BSI4 451 aa28.79■■■□□ 2.2
SEMA3C-207ENST00000470581 LRRC2Q9BYS8 371 aa28.79■■■□□ 2.2
SEMA3C-207ENST00000470581 CRISPLD2Q9H0B8 497 aa28.79■■■□□ 2.2
SEMA3C-207ENST00000470581 WDR19Q8NEZ3 1342 aa28.78■■■□□ 2.2
SEMA3C-207ENST00000470581 CAPN2P17655 700 aa28.78■■■□□ 2.2
SEMA3C-207ENST00000470581 CDC37Q16543 378 aaPredicted RBP28.78■■■□□ 2.2
SEMA3C-207ENST00000470581 ZNF654Q8IZM8 581 aa28.78■■■□□ 2.2
SEMA3C-207ENST00000470581 NUP133Q8WUM0 1156 aa28.78■■■□□ 2.2
SEMA3C-207ENST00000470581 JMJD4Q9H9V9 463 aa28.78■■■□□ 2.2
SEMA3C-207ENST00000470581 PFASO15067 1338 aa28.77■■■□□ 2.2
SEMA3C-207ENST00000470581 CCDC69A6NI79 296 aa28.77■■■□□ 2.2
SEMA3C-207ENST00000470581 POTEB2H3BUK9 544 aa28.77■■■□□ 2.2
SEMA3C-207ENST00000470581 CYBAP13498 195 aa28.77■■■□□ 2.2
SEMA3C-207ENST00000470581 LIFRP42702 1097 aa28.77■■■□□ 2.2
SEMA3C-207ENST00000470581 NSMFQ6X4W1 530 aa28.77■■■□□ 2.2
SEMA3C-207ENST00000470581 TRPV1Q8NER1 839 aa28.77■■■□□ 2.2
SEMA3C-207ENST00000470581 KCNB2Q92953 911 aa28.77■■■□□ 2.2
SEMA3C-207ENST00000470581 TNRC18O15417 2968 aaPredicted RBP28.76■■■□□ 2.19
SEMA3C-207ENST00000470581 USH1GQ495M9 461 aa28.76■■■□□ 2.19
SEMA3C-207ENST00000470581 PRAMEF19Q5SWL8 479 aa28.76■■■□□ 2.19
SEMA3C-207ENST00000470581 DHX32Q7L7V1 743 aaKnown RBP28.76■■■□□ 2.19
SEMA3C-207ENST00000470581 EPB41L2O43491 1005 aaKnown RBP28.75■■■□□ 2.19
SEMA3C-207ENST00000470581 DDAH1O94760 285 aa28.75■■■□□ 2.19
SEMA3C-207ENST00000470581 CNTN2Q02246 1040 aa28.75■■■□□ 2.19
SEMA3C-207ENST00000470581 ZNF467Q7Z7K2 595 aaPredicted RBP28.75■■■□□ 2.19
SEMA3C-207ENST00000470581 MSL3Q8N5Y2 521 aaKnown RBP28.75■■■□□ 2.19
SEMA3C-207ENST00000470581 MYL10Q9BUA6 226 aa28.75■■■□□ 2.19
SEMA3C-207ENST00000470581 CYP39A1Q9NYL5 469 aa28.75■■■□□ 2.19
SEMA3C-207ENST00000470581 SNX14Q9Y5W7 946 aa28.75■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms