RNA–Protein interactions for RNA: ENST00000417066.5

CCDC148-204, Transcript of coiled-coil domain containing 148, humanhuman

TSL 1 (best)

Gene CCDC148, Length 1,447 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148-204ENST00000417066 RNF20Q5VTR2 975 aa22.36■■□□□ 1.17
CCDC148-204ENST00000417066 STAG2Q8N3U4 1231 aa22.36■■□□□ 1.17
CCDC148-204ENST00000417066 ALAS1P13196 640 aa22.35■■□□□ 1.17
CCDC148-204ENST00000417066 CYP2C19P33261 490 aa22.35■■□□□ 1.17
CCDC148-204ENST00000417066 SART3Q15020 963 aaKnown RBP22.35■■□□□ 1.17
CCDC148-204ENST00000417066 ADCK5Q3MIX3 580 aa22.35■■□□□ 1.17
CCDC148-204ENST00000417066 TRMT44Q8IYL2 757 aaKnown RBP22.35■■□□□ 1.17
CCDC148-204ENST00000417066 LRRC2Q9BYS8 371 aa22.35■■□□□ 1.17
CCDC148-204ENST00000417066 GJB1P08034 283 aa22.34■■□□□ 1.17
CCDC148-204ENST00000417066 PARP1P09874 1014 aaKnown RBP22.34■■□□□ 1.17
CCDC148-204ENST00000417066 MCM5P33992 734 aa22.34■■□□□ 1.17
CCDC148-204ENST00000417066 MAP3K21Q5TCX8 1036 aa22.34■■□□□ 1.17
CCDC148-204ENST00000417066 LY9Q9HBG7 655 aa22.34■■□□□ 1.17
CCDC148-204ENST00000417066 CCPG1Q9ULG6 757 aa22.34■■□□□ 1.17
CCDC148-204ENST00000417066 SMCHD1A6NHR9 2005 aa22.34■■□□□ 1.17
CCDC148-204ENST00000417066 ZNFX1Q9P2E3 1918 aaKnown RBP22.34■■□□□ 1.17
CCDC148-204ENST00000417066 RPTORQ8N122 1335 aa22.33■■□□□ 1.17
CCDC148-204ENST00000417066 ASPRV1Q53RT3 343 aa22.33■■□□□ 1.17
CCDC148-204ENST00000417066 MUM1L1Q5H9M0 696 aa22.33■■□□□ 1.17
CCDC148-204ENST00000417066 CHST13Q8NET6 341 aa22.33■■□□□ 1.17
CCDC148-204ENST00000417066 DDX11Q96FC9 970 aa22.33■■□□□ 1.17
CCDC148-204ENST00000417066 DEFB118Q96PH6 123 aa22.33■■□□□ 1.17
CCDC148-204ENST00000417066 TRERF1Q96PN7 1200 aa22.33■■□□□ 1.17
CCDC148-204ENST00000417066 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.33■■□□□ 1.17
CCDC148-204ENST00000417066 PAK6Q9NQU5 681 aaPredicted RBP22.33■■□□□ 1.17
CCDC148-204ENST00000417066 RNF146Q9NTX7 359 aa22.33■■□□□ 1.17
CCDC148-204ENST00000417066 IGHA2P01877 340 aa22.32■■□□□ 1.16
CCDC148-204ENST00000417066 ICAM1P05362 532 aa22.32■■□□□ 1.16
CCDC148-204ENST00000417066 CCND3P30281 292 aaPredicted RBP22.32■■□□□ 1.16
CCDC148-204ENST00000417066 ZNF792Q3KQV3 632 aa22.32■■□□□ 1.16
CCDC148-204ENST00000417066 TSGA10IPQ3SY00 556 aa22.32■■□□□ 1.16
CCDC148-204ENST00000417066 MFSD14CQ5VZR4 134 aa22.32■■□□□ 1.16
CCDC148-204ENST00000417066 ADGRF4Q8IZF3 695 aa22.32■■□□□ 1.16
CCDC148-204ENST00000417066 ANKRD35Q8N283 1001 aa22.32■■□□□ 1.16
CCDC148-204ENST00000417066 SHISA4Q96DD7 197 aa22.32■■□□□ 1.16
CCDC148-204ENST00000417066 MAML3Q96JK9 1138 aa22.32■■□□□ 1.16
CCDC148-204ENST00000417066 TCEANC2Q96MN5 208 aa22.32■■□□□ 1.16
CCDC148-204ENST00000417066 NEK1Q96PY6 1258 aa22.32■■□□□ 1.16
CCDC148-204ENST00000417066 VAT1LQ9HCJ6 419 aa22.32■■□□□ 1.16
CCDC148-204ENST00000417066 HMX1Q9NP08 348 aaPredicted RBP22.32■■□□□ 1.16
CCDC148-204ENST00000417066 MAD2L2Q9UI95 211 aa22.32■■□□□ 1.16
CCDC148-204ENST00000417066 ZNF236Q9UL36 1845 aa22.32■■□□□ 1.16
CCDC148-204ENST00000417066 MKI67P46013 3256 aaKnown RBP22.32■■□□□ 1.16
CCDC148-204ENST00000417066 REC8O95072 547 aa22.31■■□□□ 1.16
CCDC148-204ENST00000417066 HSPA4P34932 840 aa22.31■■□□□ 1.16
CCDC148-204ENST00000417066 GJA8P48165 433 aa22.31■■□□□ 1.16
CCDC148-204ENST00000417066 U2AF1L4Q8WU68 220 aaKnown RBP22.31■■□□□ 1.16
CCDC148-204ENST00000417066 MYL10Q9BUA6 226 aa22.31■■□□□ 1.16
CCDC148-204ENST00000417066 ACAD9Q9H845 621 aa22.31■■□□□ 1.16
CCDC148-204ENST00000417066 SLC5A4Q9NY91 659 aa22.31■■□□□ 1.16
CCDC148-204ENST00000417066 FBXO40Q9UH90 709 aa22.31■■□□□ 1.16
CCDC148-204ENST00000417066 DNAJC25-GNG10A0A024R161 153 aa22.31■■□□□ 1.16
CCDC148-204ENST00000417066 SH2B2O14492 632 aaPredicted RBP22.31■■□□□ 1.16
CCDC148-204ENST00000417066 SGPL1O95470 568 aa22.31■■□□□ 1.16
CCDC148-204ENST00000417066 TROAPQ12815 778 aa22.31■■□□□ 1.16
CCDC148-204ENST00000417066 OLFML2BQ68BL8 750 aa22.31■■□□□ 1.16
CCDC148-204ENST00000417066 TRPV1Q8NER1 839 aa22.31■■□□□ 1.16
CCDC148-204ENST00000417066 PALM3A6NDB9 673 aaPredicted RBP22.3■■□□□ 1.16
CCDC148-204ENST00000417066 KLRF2D3W0D1 207 aa22.3■■□□□ 1.16
CCDC148-204ENST00000417066 MLLT1Q03111 559 aaPredicted RBP22.3■■□□□ 1.16
CCDC148-204ENST00000417066 GRM4Q14833 912 aa22.3■■□□□ 1.16
CCDC148-204ENST00000417066 CDC37Q16543 378 aaPredicted RBP22.3■■□□□ 1.16
CCDC148-204ENST00000417066 TKFCQ3LXA3 575 aa22.3■■□□□ 1.16
CCDC148-204ENST00000417066 PRAMEF19Q5SWL8 479 aa22.3■■□□□ 1.16
CCDC148-204ENST00000417066 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.3■■□□□ 1.16
CCDC148-204ENST00000417066 CATIPQ7Z7H3 387 aa22.3■■□□□ 1.16
CCDC148-204ENST00000417066 NUP133Q8WUM0 1156 aa22.3■■□□□ 1.16
CCDC148-204ENST00000417066 KCNB2Q92953 911 aa22.3■■□□□ 1.16
CCDC148-204ENST00000417066 TMEM87BQ96K49 555 aa22.3■■□□□ 1.16
CCDC148-204ENST00000417066 JMJD4Q9H9V9 463 aa22.3■■□□□ 1.16
CCDC148-204ENST00000417066 A1CFQ9NQ94 594 aaKnown RBP22.3■■□□□ 1.16
CCDC148-204ENST00000417066 SNX14Q9Y5W7 946 aa22.3■■□□□ 1.16
CCDC148-204ENST00000417066 RBBP6Q7Z6E9 1792 aaKnown RBP22.29■■□□□ 1.16
CCDC148-204ENST00000417066 DHX16O60231 1041 aaKnown RBP22.29■■□□□ 1.16
CCDC148-204ENST00000417066 CPA1P15085 419 aa22.29■■□□□ 1.16
CCDC148-204ENST00000417066 CNTN2Q02246 1040 aa22.29■■□□□ 1.16
CCDC148-204ENST00000417066 SLC35G1Q2M3R5 365 aa22.29■■□□□ 1.16
CCDC148-204ENST00000417066 NFXL1Q6ZNB6 911 aa22.29■■□□□ 1.16
CCDC148-204ENST00000417066 ZNF654Q8IZM8 581 aa22.29■■□□□ 1.16
CCDC148-204ENST00000417066 MTA3Q9BTC8 594 aa22.29■■□□□ 1.16
CCDC148-204ENST00000417066 DIS3Q9Y2L1 958 aaKnown RBP22.29■■□□□ 1.16
CCDC148-204ENST00000417066 NFIBO00712 420 aa22.28■■□□□ 1.16
CCDC148-204ENST00000417066 TFRCP02786 760 aaKnown RBP22.28■■□□□ 1.16
CCDC148-204ENST00000417066 EXOSC10Q01780 885 aaKnown RBP22.28■■□□□ 1.16
CCDC148-204ENST00000417066 RAB11FIP4Q86YS3 637 aa22.28■■□□□ 1.16
CCDC148-204ENST00000417066 FGD4Q96M96 766 aa22.28■■□□□ 1.16
CCDC148-204ENST00000417066 USP26Q9BXU7 913 aa22.28■■□□□ 1.16
CCDC148-204ENST00000417066 CYBAP13498 195 aa22.27■■□□□ 1.16
CCDC148-204ENST00000417066 CNGA1P29973 690 aa22.27■■□□□ 1.16
CCDC148-204ENST00000417066 KRT32Q14532 448 aa22.27■■□□□ 1.16
CCDC148-204ENST00000417066 QRICH1Q2TAL8 776 aa22.27■■□□□ 1.16
CCDC148-204ENST00000417066 USH1GQ495M9 461 aa22.27■■□□□ 1.16
CCDC148-204ENST00000417066 NSMFQ6X4W1 530 aa22.27■■□□□ 1.16
CCDC148-204ENST00000417066 DHX32Q7L7V1 743 aaKnown RBP22.27■■□□□ 1.16
CCDC148-204ENST00000417066 CLEC4DQ8WXI8 215 aa22.27■■□□□ 1.16
CCDC148-204ENST00000417066 PURBQ96QR8 312 aaKnown RBP22.27■■□□□ 1.16
CCDC148-204ENST00000417066 CCDC69A6NI79 296 aa22.26■■□□□ 1.15
CCDC148-204ENST00000417066 RXRAP19793 462 aa22.26■■□□□ 1.15
CCDC148-204ENST00000417066 LIFRP42702 1097 aa22.26■■□□□ 1.15
CCDC148-204ENST00000417066 TMTC2Q8N394 836 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms