RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 CLEC4GQ6UXB4 293 aa13.64□□□□□ -0.23
COL20A1-201ENST00000358894 NUP58Q9BVL2 599 aa13.64□□□□□ -0.23
COL20A1-201ENST00000358894 CDC23Q9UJX2 597 aa13.64□□□□□ -0.23
COL20A1-201ENST00000358894 USP21Q9UK80 565 aa13.64□□□□□ -0.23
COL20A1-201ENST00000358894 PLS1Q14651 629 aa13.64□□□□□ -0.23
COL20A1-201ENST00000358894 ZNF658Q5TYW1 1059 aaPredicted RBP13.64□□□□□ -0.23
COL20A1-201ENST00000358894 SH3RF3Q8TEJ3 882 aaPredicted RBP13.64□□□□□ -0.23
COL20A1-201ENST00000358894 ZNF512BQ96KM6 892 aaPredicted RBP13.64□□□□□ -0.23
COL20A1-201ENST00000358894 IFIH1Q9BYX4 1025 aaKnown RBP13.64□□□□□ -0.23
COL20A1-201ENST00000358894 SAR1BQ9Y6B6 198 aa13.64□□□□□ -0.23
COL20A1-201ENST00000358894 PPP1R2P41236 205 aa13.64□□□□□ -0.23
COL20A1-201ENST00000358894 PIGSQ96S52 555 aa13.64□□□□□ -0.23
COL20A1-201ENST00000358894 USP40Q9NVE5 1235 aa13.64□□□□□ -0.23
COL20A1-201ENST00000358894 CHMP2AO43633 222 aa13.64□□□□□ -0.23
COL20A1-201ENST00000358894 BRD2P25440 801 aaKnown RBP13.64□□□□□ -0.23
COL20A1-201ENST00000358894 TUBB4BP68371 445 aa13.64□□□□□ -0.23
COL20A1-201ENST00000358894 PTPAQ15257 358 aa13.64□□□□□ -0.23
COL20A1-201ENST00000358894 DOK7Q18PE1 504 aa13.64□□□□□ -0.23
COL20A1-201ENST00000358894 SRBD1Q8N5C6 995 aaKnown RBP13.64□□□□□ -0.23
COL20A1-201ENST00000358894 TBCKQ8TEA7 893 aa13.64□□□□□ -0.23
COL20A1-201ENST00000358894 COA7Q96BR5 231 aa13.64□□□□□ -0.23
COL20A1-201ENST00000358894 GOPCQ9HD26 462 aa13.64□□□□□ -0.23
COL20A1-201ENST00000358894 CAMTA2O94983 1202 aa13.63□□□□□ -0.23
COL20A1-201ENST00000358894 CNOT6LQ96LI5 555 aaKnown RBP13.63□□□□□ -0.23
COL20A1-201ENST00000358894 ITPK1Q13572 414 aa13.63□□□□□ -0.23
COL20A1-201ENST00000358894 NCAPH2Q6IBW4 605 aa13.63□□□□□ -0.23
COL20A1-201ENST00000358894 SRGAP1Q7Z6B7 1085 aa13.63□□□□□ -0.23
COL20A1-201ENST00000358894 RABGGTAQ92696 567 aa13.63□□□□□ -0.23
COL20A1-201ENST00000358894 DDX41Q9UJV9 622 aaKnown RBP13.63□□□□□ -0.23
COL20A1-201ENST00000358894 XDHP47989 1333 aa13.63□□□□□ -0.23
COL20A1-201ENST00000358894 MFAP3LO75121 409 aa13.63□□□□□ -0.23
COL20A1-201ENST00000358894 PLCG1P19174 1290 aa13.63□□□□□ -0.23
COL20A1-201ENST00000358894 TNIP1Q15025 636 aa13.63□□□□□ -0.23
COL20A1-201ENST00000358894 E2F4Q16254 413 aa13.63□□□□□ -0.23
COL20A1-201ENST00000358894 WDR24Q96S15 920 aa13.63□□□□□ -0.23
COL20A1-201ENST00000358894 PARD6BQ9BYG5 372 aa13.63□□□□□ -0.23
COL20A1-201ENST00000358894 HSF2BPO75031 334 aa13.62□□□□□ -0.23
COL20A1-201ENST00000358894 PFKFB3Q16875 520 aaPredicted RBP13.62□□□□□ -0.23
COL20A1-201ENST00000358894 LRP10Q7Z4F1 713 aa13.62□□□□□ -0.23
COL20A1-201ENST00000358894 TBC1D22AQ8WUA7 517 aa13.62□□□□□ -0.23
COL20A1-201ENST00000358894 DISC1Q9NRI5 854 aa13.62□□□□□ -0.23
COL20A1-201ENST00000358894 PKD2L1Q9P0L9 805 aa13.62□□□□□ -0.23
COL20A1-201ENST00000358894 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.62□□□□□ -0.23
COL20A1-201ENST00000358894 NWD1Q149M9 1564 aa13.62□□□□□ -0.23
COL20A1-201ENST00000358894 TUBBP07437 444 aa13.62□□□□□ -0.23
COL20A1-201ENST00000358894 SSR1P43307 286 aaKnown RBP13.62□□□□□ -0.23
COL20A1-201ENST00000358894 TUBB2AQ13885 445 aa13.62□□□□□ -0.23
COL20A1-201ENST00000358894 LRRC41Q15345 812 aa13.62□□□□□ -0.23
COL20A1-201ENST00000358894 STAG2Q8N3U4 1231 aa13.62□□□□□ -0.23
COL20A1-201ENST00000358894 TUBB2BQ9BVA1 445 aa13.62□□□□□ -0.23
COL20A1-201ENST00000358894 HAUS4Q9H6D7 363 aa13.62□□□□□ -0.23
COL20A1-201ENST00000358894 RWDD2AQ9UIY3 292 aa13.62□□□□□ -0.23
COL20A1-201ENST00000358894 CYP27A1Q02318 531 aa13.62□□□□□ -0.23
COL20A1-201ENST00000358894 IFFO1Q0D2I5 559 aa13.62□□□□□ -0.23
COL20A1-201ENST00000358894 ZYXQ15942 572 aaKnown RBP13.62□□□□□ -0.23
COL20A1-201ENST00000358894 CCDC113Q9H0I3 377 aa13.62□□□□□ -0.23
COL20A1-201ENST00000358894 SALL1Q9NSC2 1324 aa13.61□□□□□ -0.23
COL20A1-201ENST00000358894 EBAG9O00559 213 aa13.61□□□□□ -0.23
COL20A1-201ENST00000358894 ZEB2O60315 1214 aa13.61□□□□□ -0.23
COL20A1-201ENST00000358894 NF2P35240 595 aa13.61□□□□□ -0.23
COL20A1-201ENST00000358894 SLC16A2P36021 539 aa13.61□□□□□ -0.23
COL20A1-201ENST00000358894 CCDC84Q86UT8 332 aaPredicted RBP13.61□□□□□ -0.23
COL20A1-201ENST00000358894 DGKHQ86XP1 1220 aa13.61□□□□□ -0.23
COL20A1-201ENST00000358894 VEZTQ9HBM0 779 aa13.61□□□□□ -0.23
COL20A1-201ENST00000358894 PCDHA12Q9UN75 941 aa13.61□□□□□ -0.23
COL20A1-201ENST00000358894 LEMD3Q9Y2U8 911 aa13.61□□□□□ -0.23
COL20A1-201ENST00000358894 CETN3O15182 167 aa13.61□□□□□ -0.23
COL20A1-201ENST00000358894 ZMYND10O75800 440 aa13.61□□□□□ -0.23
COL20A1-201ENST00000358894 FAM13AO94988 1023 aa13.61□□□□□ -0.23
COL20A1-201ENST00000358894 PNMA6AP0CW24 399 aaPredicted RBP13.61□□□□□ -0.23
COL20A1-201ENST00000358894 NSUN4Q96CB9 384 aaKnown RBP13.61□□□□□ -0.23
COL20A1-201ENST00000358894 PANX2Q96RD6 677 aa13.61□□□□□ -0.23
COL20A1-201ENST00000358894 TSGA10Q9BZW7 698 aa13.61□□□□□ -0.23
COL20A1-201ENST00000358894 NTSR2O95665 410 aa13.61□□□□□ -0.23
COL20A1-201ENST00000358894 PRCPP42785 496 aa13.61□□□□□ -0.23
COL20A1-201ENST00000358894 BRD3Q15059 726 aa13.61□□□□□ -0.23
COL20A1-201ENST00000358894 NTRK3Q16288 839 aa13.61□□□□□ -0.23
COL20A1-201ENST00000358894 PTPROQ16827 1216 aa13.61□□□□□ -0.23
COL20A1-201ENST00000358894 WHAMMP3Q1A5X7 153 aa13.61□□□□□ -0.23
COL20A1-201ENST00000358894 LONRF2Q1L5Z9 754 aa13.61□□□□□ -0.23
COL20A1-201ENST00000358894 TMEM132AQ24JP5 1023 aa13.61□□□□□ -0.23
COL20A1-201ENST00000358894 TCP11X2Q5H9J9 407 aa13.61□□□□□ -0.23
COL20A1-201ENST00000358894 GALNT17Q6IS24 598 aa13.61□□□□□ -0.23
COL20A1-201ENST00000358894 KIAA0825Q8IV33 1275 aa13.61□□□□□ -0.23
COL20A1-201ENST00000358894 MTA3Q9BTC8 594 aa13.61□□□□□ -0.23
COL20A1-201ENST00000358894 EFCC1Q9HA90 598 aa13.61□□□□□ -0.23
COL20A1-201ENST00000358894 CACNA1FO60840 1977 aa13.61□□□□□ -0.23
COL20A1-201ENST00000358894 MAP2K2P36507 400 aa13.61□□□□□ -0.23
COL20A1-201ENST00000358894 VAV2P52735 878 aa13.61□□□□□ -0.23
COL20A1-201ENST00000358894 MARCH10Q8NA82 808 aaPredicted RBP13.61□□□□□ -0.23
COL20A1-201ENST00000358894 TMEM47Q9BQJ4 181 aa13.61□□□□□ -0.23
COL20A1-201ENST00000358894 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.6□□□□□ -0.23
COL20A1-201ENST00000358894 ATP2B4P23634 1241 aa13.6□□□□□ -0.23
COL20A1-201ENST00000358894 CACNB1Q02641 598 aaPredicted RBP13.6□□□□□ -0.23
COL20A1-201ENST00000358894 SLC9C1Q4G0N8 1177 aa13.6□□□□□ -0.23
COL20A1-201ENST00000358894 NYAP1Q6ZVC0 841 aa13.6□□□□□ -0.23
COL20A1-201ENST00000358894 RGS22Q8NE09 1264 aa13.6□□□□□ -0.23
COL20A1-201ENST00000358894 ATRIPQ8WXE1 791 aa13.6□□□□□ -0.23
COL20A1-201ENST00000358894 P2RX5Q93086 422 aa13.6□□□□□ -0.23
COL20A1-201ENST00000358894 PSTPIP2Q9H939 334 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms