RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 Sp4Q62445 782 aa10.95□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Ankrd24Q80VM7 985 aa10.95□□□□□ -0.66
Ldlr-201ENSMUST00000034713 D130040H23RikQ8BII3 405 aa10.95□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Lonrf3Q9D4H7 753 aa10.95□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Tfcp2Q9ERA0 502 aa10.95□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Popdc2Q9ES82 367 aa10.95□□□□□ -0.66
Ldlr-201ENSMUST00000034713 AatfQ9JKX4 526 aaKnown RBP10.95□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Chd2E9PZM4 1827 aaKnown RBP10.95□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Cyp2j7A0A140T8U1 504 aa10.94□□□□□ -0.66
Ldlr-201ENSMUST00000034713 DnttP09838 530 aa10.94□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Stmn2P55821 179 aa10.94□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Irx1P81068 480 aa10.94□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Dcaf17Q3TUL7 519 aa10.94□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Gpr162Q3UN16 588 aa10.94□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Drc1Q3USS3 753 aa10.94□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Cdc37Q61081 379 aa10.94□□□□□ -0.66
Ldlr-201ENSMUST00000034713 RragaQ80X95 313 aa10.94□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Dhx30Q99PU8 1217 aaKnown RBP10.94□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Lrrc74aA0A1Y7VMD6 494 aa10.94□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Gm6121L7MUF1 212 aa10.94□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Nhej1Q3KNJ2 295 aa10.94□□□□□ -0.66
Ldlr-201ENSMUST00000034713 SpopQ6ZWS8 374 aa10.94□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Slc4a8Q8JZR6 1089 aa10.94□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Stx17Q9D0I4 301 aa10.94□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Nop56Q9D6Z1 580 aaKnown RBP10.94□□□□□ -0.66
Ldlr-201ENSMUST00000034713 NapaQ9DB05 295 aa10.94□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Myoz2Q9JJW5 264 aa10.94□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Rbm6S4R1W5 1118 aaKnown RBP10.94□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Ppp1r9aH3BJD6 1292 aa10.94□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Akr1b8P45377 316 aa10.94□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Acot10Q32MW3 439 aa10.94□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Sval3Q76I99 144 aa10.94□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Apol7cQ8C6E1 369 aa10.94□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Rab44Q8CB87 725 aa10.94□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Kiaa1024Q8K3V7 917 aa10.94□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Uba5Q8VE47 403 aa10.94□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Dph6Q9CQ28 267 aa10.94□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Fam217aQ9D9W6 419 aa10.94□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Ercc5P35689 1170 aa10.94□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Cct6aP80317 531 aaKnown RBP10.94□□□□□ -0.66
Ldlr-201ENSMUST00000034713 NyxP83503 476 aa10.94□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Ctnna3Q65CL1 895 aa10.94□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Tshz2Q68FE9 1030 aa10.94□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Mtss1lQ6P9S0 715 aa10.94□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Nek5Q7TSC3 627 aa10.94□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Klhl7Q8BUL5 586 aa10.94□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Ift172Q6VH22 1749 aa10.94□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Enc1O35709 589 aa10.93□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Ctnna1P26231 906 aaKnown RBP10.93□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Anks1aP59672 1150 aa10.93□□□□□ -0.66
Ldlr-201ENSMUST00000034713 NpeppsQ11011 920 aa10.93□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Kiaa1468Q148V7 1216 aa10.93□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Atg9aQ68FE2 551 aa10.93□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Wdr44Q6NVE8 915 aa10.93□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Trim37Q6PCX9 961 aa10.93□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Igsf3Q6ZQA6 1194 aa10.93□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Ankrd13aQ80UP5 588 aa10.93□□□□□ -0.66
Ldlr-201ENSMUST00000034713 QarsQ8BML9 775 aa10.93□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Mei4Q8BRM6 389 aa10.93□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Ccz1Q8C1Y8 480 aa10.93□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Nek9Q8K1R7 984 aa10.93□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Sumf1Q8R0F3 372 aa10.93□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Filip1Q9CS72 1211 aa10.93□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Myom1Q62234 1667 aaKnown RBP10.93□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Ppfia4B8QI36 1187 aa10.93□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Psmc2P46471 433 aa10.93□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Fdx1P46656 188 aa10.93□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Dynll1P63168 89 aa10.93□□□□□ -0.66
Ldlr-201ENSMUST00000034713 NeblQ0II04 452 aa10.93□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Pls1Q3V0K9 630 aa10.93□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Ovgp1Q62010 721 aa10.93□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Krt40Q6IFX3 439 aa10.93□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Ttll4Q80UG8 1193 aa10.93□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Ccne2Q9Z238 404 aa10.93□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Flt1P35969 1333 aa10.93□□□□□ -0.66
Ldlr-201ENSMUST00000034713 ChkbO55229 394 aa10.93□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Eps15P42567 897 aa10.93□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Rnf40Q3U319 1001 aa10.93□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Herc4Q6PAV2 1057 aa10.93□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Slc17a8Q8BFU8 601 aa10.93□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Spata4Q8K3V1 295 aa10.93□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Gbp7Q91Z40 638 aa10.93□□□□□ -0.66
Ldlr-201ENSMUST00000034713 4931423N10RikQ9D4J9 382 aa10.93□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Neurog2P70447 263 aa10.93□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Dact3Q0PHV7 610 aa10.93□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Psd3Q2PFD7 1037 aa10.93□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Psmd1Q3TXS7 953 aa10.93□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Rhpn1Q61085 643 aa10.93□□□□□ -0.66
Ldlr-201ENSMUST00000034713 2310002L09RikQ9D7L5 217 aa10.93□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Rcan1Q9JHG6 198 aa10.93□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Krt71Q9R0H5 524 aa10.93□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Cnbd1B1AWM0 430 aa10.92□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Amigo3Q8C2S7 508 aa10.92□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Ushbp1Q8R370 680 aa10.92□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Mrpl50Q8VDT9 159 aaKnown RBP10.92□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Golga1Q9CW79 758 aa10.92□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Snai1Q02085 264 aa10.92□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Caprin2Q05A80 1031 aaKnown RBP10.92□□□□□ -0.66
Ldlr-201ENSMUST00000034713 Cct6bQ61390 531 aa10.92□□□□□ -0.66
Ldlr-201ENSMUST00000034713 B4galnt4Q766D5 1034 aa10.92□□□□□ -0.66
Retrieved 100 of 22,080 RNA–protein pairs in 16.9 ms