RNA–Protein interactions for RNA: YPR001W

CIT3, Transcript of Dual specificity mitochondrial citrate and methylcitrate synthase, yeastyeast

Gene CIT3, Length 1,461 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CIT3YPR001W ATG38Q05789 226 aaKnown RBP6.66□□□□□ -1.34
CIT3YPR001W FRE5Q08908 694 aa6.66□□□□□ -1.34
CIT3YPR001W YBR255C-AQ3E776 120 aa6.66□□□□□ -1.34
CIT3YPR001W MF(ALPHA)1P01149 165 aa6.65□□□□□ -1.35
CIT3YPR001W CBP2P03874 630 aaPredicted RBP6.65□□□□□ -1.35
CIT3YPR001W RPP2AP05319 106 aaKnown RBP6.65□□□□□ -1.35
CIT3YPR001W RNA1P11745 407 aaKnown RBP6.65□□□□□ -1.35
CIT3YPR001W GCD2P12754 651 aaPredicted RBP6.65□□□□□ -1.35
CIT3YPR001W PDE1P22434 369 aa6.65□□□□□ -1.35
CIT3YPR001W PRD1P25375 712 aa6.65□□□□□ -1.35
CIT3YPR001W EMC1P25574 760 aa6.65□□□□□ -1.35
CIT3YPR001W IDH2P28241 369 aaKnown RBP6.65□□□□□ -1.35
CIT3YPR001W PTC7P38797 343 aa6.65□□□□□ -1.35
CIT3YPR001W SER3P40054 469 aa6.65□□□□□ -1.35
CIT3YPR001W ELP2P42935 788 aa6.65□□□□□ -1.35
CIT3YPR001W EFM3P47163 339 aa6.65□□□□□ -1.35
CIT3YPR001W IMO32P53219 342 aa6.65□□□□□ -1.35
CIT3YPR001W YGR054WP53235 642 aaKnown RBP6.65□□□□□ -1.35
CIT3YPR001W RSM28Q03430 361 aa6.65□□□□□ -1.35
CIT3YPR001W ACL4Q03771 387 aa6.65□□□□□ -1.35
CIT3YPR001W TAP42Q04372 366 aa6.65□□□□□ -1.35
CIT3YPR001W YLR413WQ06689 675 aa6.65□□□□□ -1.35
CIT3YPR001W FRE3Q08905 711 aa6.65□□□□□ -1.35
CIT3YPR001W AI1P03875 834 aa6.64□□□□□ -1.35
CIT3YPR001W CHS2P14180 963 aa6.64□□□□□ -1.35
CIT3YPR001W MER1P16523 270 aa6.64□□□□□ -1.35
CIT3YPR001W FEN2P25621 512 aaKnown RBP6.64□□□□□ -1.35
CIT3YPR001W SSE2P32590 693 aaKnown RBP6.64□□□□□ -1.35
CIT3YPR001W TUL1P36096 758 aa6.64□□□□□ -1.35
CIT3YPR001W PIM1P36775 1133 aa6.64□□□□□ -1.35
CIT3YPR001W OYE3P41816 400 aaPredicted RBP6.64□□□□□ -1.35
CIT3YPR001W YJL132WP47014 750 aa6.64□□□□□ -1.35
CIT3YPR001W LIA1P47120 325 aaKnown RBP6.64□□□□□ -1.35
CIT3YPR001W SKO1Q02100 647 aa6.64□□□□□ -1.35
CIT3YPR001W USA1Q03714 838 aa6.64□□□□□ -1.35
CIT3YPR001W VPS20Q04272 221 aa6.64□□□□□ -1.35
CIT3YPR001W TPO1Q07824 586 aa6.64□□□□□ -1.35
CIT3YPR001W GAS5Q08193 484 aa6.64□□□□□ -1.35
CIT3YPR001W MRPL25P23369 157 aa6.63□□□□□ -1.35
CIT3YPR001W FAA1P30624 700 aaKnown RBP6.63□□□□□ -1.35
CIT3YPR001W YBL055CP34220 418 aaPredicted RBP6.63□□□□□ -1.35
CIT3YPR001W RRP1P35178 278 aaPredicted RBP6.63□□□□□ -1.35
CIT3YPR001W NTC20P38302 140 aaPredicted RBP6.63□□□□□ -1.35
CIT3YPR001W DED81P38707 554 aaKnown RBP6.63□□□□□ -1.35
CIT3YPR001W MLH1P38920 769 aa6.63□□□□□ -1.35
CIT3YPR001W ELO3P40319 345 aa6.63□□□□□ -1.35
CIT3YPR001W ASG1P40467 964 aa6.63□□□□□ -1.35
CIT3YPR001W RPS7BP48164 190 aaKnown RBP6.63□□□□□ -1.35
CIT3YPR001W MSE1P48525 536 aa6.63□□□□□ -1.35
CIT3YPR001W PAN2P53010 1115 aaPredicted RBP6.63□□□□□ -1.35
CIT3YPR001W YGL138CP53122 345 aa6.63□□□□□ -1.35
CIT3YPR001W RMD9P53140 646 aaKnown RBP6.63□□□□□ -1.35
CIT3YPR001W YAT1P80235 687 aa6.63□□□□□ -1.35
CIT3YPR001W RRP45Q05636 305 aaKnown RBP6.63□□□□□ -1.35
CIT3YPR001W YFH1Q07540 174 aa6.63□□□□□ -1.35
CIT3YPR001W AEP3Q12089 606 aa6.63□□□□□ -1.35
CIT3YPR001W RAD61Q99359 647 aa6.63□□□□□ -1.35
CIT3YPR001W SGS1P35187 1447 aa6.63□□□□□ -1.35
CIT3YPR001W SUP35P05453 685 aaKnown RBP6.62□□□□□ -1.35
CIT3YPR001W SPO7P18410 259 aa6.62□□□□□ -1.35
CIT3YPR001W UBA1P22515 1024 aaKnown RBP6.62□□□□□ -1.35
CIT3YPR001W DMC1P25453 334 aa6.62□□□□□ -1.35
CIT3YPR001W RFA2P26754 273 aaKnown RBP6.62□□□□□ -1.35
CIT3YPR001W TIF3P34167 436 aaKnown RBP6.62□□□□□ -1.35
CIT3YPR001W MNN2P38069 597 aa6.62□□□□□ -1.35
CIT3YPR001W PFF1P38244 976 aa6.62□□□□□ -1.35
CIT3YPR001W RPP1P38786 293 aa6.62□□□□□ -1.35
CIT3YPR001W GIP4P39732 760 aa6.62□□□□□ -1.35
CIT3YPR001W YGR079WP53249 370 aa6.62□□□□□ -1.35
CIT3YPR001W RRP46P53256 223 aaPredicted RBP6.62□□□□□ -1.35
CIT3YPR001W RPT4P53549 437 aaKnown RBP6.62□□□□□ -1.35
CIT3YPR001W IPI3P53877 555 aa6.62□□□□□ -1.35
CIT3YPR001W CRN1Q06440 651 aa6.62□□□□□ -1.35
CIT3YPR001W GSH2Q08220 491 aa6.62□□□□□ -1.35
CIT3YPR001W PLP2Q12017 286 aa6.62□□□□□ -1.35
CIT3YPR001W TDH1P00360 332 aaKnown RBP6.61□□□□□ -1.35
CIT3YPR001W PPH22P23595 377 aa6.61□□□□□ -1.35
CIT3YPR001W BUR6P40096 142 aa6.61□□□□□ -1.35
CIT3YPR001W YJL107CP42947 387 aa6.61□□□□□ -1.35
CIT3YPR001W STB2P46679 850 aa6.61□□□□□ -1.35
CIT3YPR001W RPA34P47006 233 aaPredicted RBP6.61□□□□□ -1.35
CIT3YPR001W URB2P47108 1174 aa6.61□□□□□ -1.35
CIT3YPR001W SMA1Q02651 245 aa6.61□□□□□ -1.35
CIT3YPR001W GAL10P04397 699 aa6.6□□□□□ -1.35
CIT3YPR001W URA4P20051 364 aa6.6□□□□□ -1.35
CIT3YPR001W ADH7P25377 361 aa6.6□□□□□ -1.35
CIT3YPR001W NDI1P32340 513 aa6.6□□□□□ -1.35
CIT3YPR001W BCS1P32839 456 aa6.6□□□□□ -1.35
CIT3YPR001W UGP1P32861 499 aaKnown RBP6.6□□□□□ -1.35
CIT3YPR001W SKI2P35207 1287 aaKnown RBP RIP-Chip data6.6□□□□□ -1.35not detected
CIT3YPR001W MNN9P39107 395 aaKnown RBP6.6□□□□□ -1.35
CIT3YPR001W SSO2P39926 295 aa6.6□□□□□ -1.35
CIT3YPR001W YFR018CP43599 363 aa6.6□□□□□ -1.35
CIT3YPR001W NET1P47035 1189 aa6.6□□□□□ -1.35
CIT3YPR001W ECM27P47144 725 aa6.6□□□□□ -1.35
CIT3YPR001W RFX1P48743 811 aa6.6□□□□□ -1.35
CIT3YPR001W MTL1P53214 551 aa6.6□□□□□ -1.35
CIT3YPR001W RRB1Q04225 511 aaKnown RBP6.6□□□□□ -1.35
CIT3YPR001W ARG7Q04728 441 aa6.6□□□□□ -1.35
CIT3YPR001W CLP1Q08685 445 aaPredicted RBP6.6□□□□□ -1.35
Retrieved 100 of 5,963 RNA–protein pairs in 21.2 ms