RNA–Protein interactions for RNA: YPL246C

RBD2, Transcript of Possible rhomboid protease, yeast

Gene RBD2, Length 789 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RBD2	YPL246C	HPM1	P40481	377 aa		5.72	□□□□□ -1.49
RBD2	YPL246C	IRR1	P40541	1150 aa		5.72	□□□□□ -1.49
RBD2	YPL246C	LAM5	P43560	674 aa		5.72	□□□□□ -1.49
RBD2	YPL246C	NOP9	P47077	666 aa	Known RBP	5.72	□□□□□ -1.49
RBD2	YPL246C	NUP84	P52891	726 aa		5.72	□□□□□ -1.49
RBD2	YPL246C	KTR6	P54070	446 aa		5.72	□□□□□ -1.49
RBD2	YPL246C	MUK1	Q02866	612 aa		5.72	□□□□□ -1.49
RBD2	YPL246C	HMO1	Q03973	246 aa	Known RBP	5.72	□□□□□ -1.49
RBD2	YPL246C	GLO2	Q05584	274 aa		5.72	□□□□□ -1.49
RBD2	YPL246C	CDC123	Q05791	360 aa		5.72	□□□□□ -1.49
RBD2	YPL246C	AAD15	Q08361	143 aa		5.72	□□□□□ -1.49
RBD2	YPL246C	RHO2	P06781	192 aa		5.71	□□□□□ -1.5
RBD2	YPL246C	MPH2	P0CD99	609 aa		5.71	□□□□□ -1.5
RBD2	YPL246C	KIN2	P13186	1147 aa	Known RBP	5.71	□□□□□ -1.5
RBD2	YPL246C	SMI1	P32566	505 aa		5.71	□□□□□ -1.5
RBD2	YPL246C	TFC3	P34111	1160 aa		5.71	□□□□□ -1.5
RBD2	YPL246C	TSA1	P34760	196 aa	Known RBP	5.71	□□□□□ -1.5
RBD2	YPL246C	TDA11	P38854	504 aa		5.71	□□□□□ -1.5
RBD2	YPL246C	FRT2	P39734	528 aa		5.71	□□□□□ -1.5
RBD2	YPL246C	SEC27	P41811	889 aa	Known RBP	5.71	□□□□□ -1.5
RBD2	YPL246C	ARC1	P46672	376 aa	Known RBP	5.71	□□□□□ -1.5
RBD2	YPL246C	AIF1	P52923	378 aa		5.71	□□□□□ -1.5
RBD2	YPL246C	YGR016W	P53209	190 aa		5.71	□□□□□ -1.5
RBD2	YPL246C	COG2	P53271	262 aa		5.71	□□□□□ -1.5
RBD2	YPL246C	IST1	P53843	298 aa	Predicted RBP	5.71	□□□□□ -1.5
RBD2	YPL246C	SKY1	Q03656	742 aa		5.71	□□□□□ -1.5
RBD2	YPL246C	ARA2	Q04212	335 aa		5.71	□□□□□ -1.5
RBD2	YPL246C	BCP1	Q06338	283 aa		5.71	□□□□□ -1.5
RBD2	YPL246C	YOR352W	Q08816	343 aa		5.71	□□□□□ -1.5
RBD2	YPL246C	DDC1	Q08949	612 aa		5.71	□□□□□ -1.5
RBD2	YPL246C	CHS5	Q12114	671 aa	Known RBP	5.71	□□□□□ -1.5
RBD2	YPL246C	TY3A-G	Q12173	290 aa		5.71	□□□□□ -1.5
RBD2	YPL246C	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	5.71	□□□□□ -1.5	not detected
RBD2	YPL246C	TY3A-I	Q99219	290 aa		5.71	□□□□□ -1.5
RBD2	YPL246C	CYC1	P00044	109 aa	Predicted RBP	5.7	□□□□□ -1.5
RBD2	YPL246C	MET16	P18408	261 aa	Predicted RBP	5.7	□□□□□ -1.5
RBD2	YPL246C	RNQ1	P25367	405 aa		5.7	□□□□□ -1.5
RBD2	YPL246C	MSH2	P25847	964 aa		5.7	□□□□□ -1.5
RBD2	YPL246C	GAC1	P28006	793 aa		5.7	□□□□□ -1.5
RBD2	YPL246C	CCR4	P31384	837 aa	Known RBP	5.7	□□□□□ -1.5
RBD2	YPL246C	TIM23	P32897	222 aa		5.7	□□□□□ -1.5
RBD2	YPL246C	STE5	P32917	917 aa		5.7	□□□□□ -1.5
RBD2	YPL246C	KDX1	P36005	433 aa		5.7	□□□□□ -1.5
RBD2	YPL246C	YKL151C	P36059	337 aa		5.7	□□□□□ -1.5
RBD2	YPL246C	YBR184W	P38299	523 aa		5.7	□□□□□ -1.5
RBD2	YPL246C	YAP1801	P38856	637 aa		5.7	□□□□□ -1.5
RBD2	YPL246C	BEM4	P39011	633 aa		5.7	□□□□□ -1.5
RBD2	YPL246C	HOS4	P40480	1083 aa		5.7	□□□□□ -1.5
RBD2	YPL246C	DIM1	P41819	318 aa	Known RBP	5.7	□□□□□ -1.5
RBD2	YPL246C	SKP2	P42843	763 aa		5.7	□□□□□ -1.5
RBD2	YPL246C	GUF1	P46943	645 aa		5.7	□□□□□ -1.5
RBD2	YPL246C	SET2	P46995	733 aa	Known RBP	5.7	□□□□□ -1.5
RBD2	YPL246C	PEX31	P53203	462 aa		5.7	□□□□□ -1.5
RBD2	YPL246C	NOP13	P53883	403 aa	Known RBP RIP-Chip data	5.7	□□□□□ -1.5	not detected
RBD2	YPL246C	ASI2	P53895	289 aa		5.7	□□□□□ -1.5
RBD2	YPL246C	VPS9	P54787	451 aa		5.7	□□□□□ -1.5
RBD2	YPL246C	PRO2	P54885	456 aa	Known RBP	5.7	□□□□□ -1.5
RBD2	YPL246C	YMR155W	Q03795	547 aa		5.7	□□□□□ -1.5
RBD2	YPL246C	TAF11	Q04226	346 aa		5.7	□□□□□ -1.5
RBD2	YPL246C	CDA2	Q06703	312 aa		5.7	□□□□□ -1.5
RBD2	YPL246C	YOR022C	Q12204	715 aa		5.7	□□□□□ -1.5
RBD2	YPL246C	RUP1	Q12242	671 aa		5.7	□□□□□ -1.5
RBD2	YPL246C	LDB17	Q12342	491 aa		5.7	□□□□□ -1.5
RBD2	YPL246C	MDM20	Q12387	796 aa	Known RBP	5.7	□□□□□ -1.5
RBD2	YPL246C	URA4	P20051	364 aa		5.69	□□□□□ -1.5
RBD2	YPL246C	AMD2	P22580	549 aa		5.69	□□□□□ -1.5
RBD2	YPL246C	HRR25	P29295	494 aa	Known RBP	5.69	□□□□□ -1.5
RBD2	YPL246C	CYS3	P31373	394 aa	Known RBP	5.69	□□□□□ -1.5
RBD2	YPL246C	PTC1	P35182	281 aa		5.69	□□□□□ -1.5
RBD2	YPL246C	YKR078W	P36158	585 aa	Known RBP	5.69	□□□□□ -1.5
RBD2	YPL246C	SLM4	P38247	162 aa		5.69	□□□□□ -1.5
RBD2	YPL246C	FSH1	P38777	243 aa	Known RBP	5.69	□□□□□ -1.5
RBD2	YPL246C	BZZ1	P38822	633 aa		5.69	□□□□□ -1.5
RBD2	YPL246C	CRP1	P38845	465 aa	Known RBP	5.69	□□□□□ -1.5
RBD2	YPL246C	IRC24	P40580	263 aa		5.69	□□□□□ -1.5
RBD2	YPL246C	RPS10B	P46784	105 aa	Known RBP	5.69	□□□□□ -1.5
RBD2	YPL246C	SPC98	P53540	846 aa		5.69	□□□□□ -1.5
RBD2	YPL246C	BRE5	P53741	515 aa	Known RBP	5.69	□□□□□ -1.5
RBD2	YPL246C	YNL058C	P53947	316 aa		5.69	□□□□□ -1.5
RBD2	YPL246C	STP1	Q00947	519 aa		5.69	□□□□□ -1.5
RBD2	YPL246C	SRP1	Q02821	542 aa	Known RBP	5.69	□□□□□ -1.5
RBD2	YPL246C	NAN1	Q02931	896 aa	Known RBP	5.69	□□□□□ -1.5
RBD2	YPL246C	CSN9	Q03981	162 aa		5.69	□□□□□ -1.5
RBD2	YPL246C	NHX1	Q04121	633 aa		5.69	□□□□□ -1.5
RBD2	YPL246C	HRD3	Q05787	833 aa		5.69	□□□□□ -1.5
RBD2	YPL246C	ECM38	Q05902	660 aa	Predicted RBP	5.69	□□□□□ -1.5
RBD2	YPL246C	DNL4	Q08387	944 aa	Predicted RBP	5.69	□□□□□ -1.5
RBD2	YPL246C	RPS10A	Q08745	105 aa	Predicted RBP	5.69	□□□□□ -1.5
RBD2	YPL246C	TAF3	Q12297	353 aa		5.69	□□□□□ -1.5
RBD2	YPL246C	EFG1	Q3E705	233 aa	Known RBP	5.69	□□□□□ -1.5
RBD2	YPL246C	CAR1	P00812	333 aa	Known RBP	5.68	□□□□□ -1.5
RBD2	YPL246C	CIT2	P08679	460 aa		5.68	□□□□□ -1.5
RBD2	YPL246C	GLN4	P13188	809 aa	Known RBP	5.68	□□□□□ -1.5
RBD2	YPL246C	CMP2	P14747	604 aa		5.68	□□□□□ -1.5
RBD2	YPL246C	HSC82	P15108	705 aa	Known RBP	5.68	□□□□□ -1.5
RBD2	YPL246C	RSA4	P25382	515 aa	Known RBP	5.68	□□□□□ -1.5
RBD2	YPL246C	ADY2	P25613	283 aa		5.68	□□□□□ -1.5
RBD2	YPL246C	ZIP1	P31111	875 aa		5.68	□□□□□ -1.5
RBD2	YPL246C	RIM1	P32445	135 aa	Known RBP	5.68	□□□□□ -1.5
RBD2	YPL246C	ASK1	P35734	292 aa		5.68	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms