RNA–Protein interactions for RNA: YPL181W

CTI6, Transcript of Component of the Rpd3L histone deacetylase complex, yeastyeast

Gene CTI6, Length 1,521 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTI6YPL181W PLB3Q08108 686 aa8.69□□□□□ -1.02
CTI6YPL181W VHS3Q08438 674 aa8.69□□□□□ -1.02
CTI6YPL181W RPN8Q08723 338 aaKnown RBP8.69□□□□□ -1.02
CTI6YPL181W TFB4Q12004 338 aa8.69□□□□□ -1.02
CTI6YPL181W YLR053CQ12026 108 aa8.69□□□□□ -1.02
CTI6YPL181W UBX3Q12229 455 aa8.69□□□□□ -1.02
CTI6YPL181W ICT1Q12385 394 aa8.69□□□□□ -1.02
CTI6YPL181W SEC53P07283 254 aaKnown RBP8.68□□□□□ -1.02
CTI6YPL181W VPS34P22543 875 aa8.68□□□□□ -1.02
CTI6YPL181W SPR1P32603 445 aa8.68□□□□□ -1.02
CTI6YPL181W TIP20P33891 701 aa8.68□□□□□ -1.02
CTI6YPL181W RRP14P36080 434 aaKnown RBP8.68□□□□□ -1.02
CTI6YPL181W UTH1P36135 365 aa8.68□□□□□ -1.02
CTI6YPL181W YJL206CP39529 758 aa8.68□□□□□ -1.02
CTI6YPL181W LSM5P40089 93 aaKnown RBP8.68□□□□□ -1.02
CTI6YPL181W BIR1P47134 954 aa8.68□□□□□ -1.02
CTI6YPL181W SSL1Q04673 461 aaPredicted RBP8.68□□□□□ -1.02
CTI6YPL181W CRN1Q06440 651 aa8.68□□□□□ -1.02
CTI6YPL181W RSC3Q06639 885 aa8.68□□□□□ -1.02
CTI6YPL181W PHO5P00635 467 aa8.67□□□□□ -1.02
CTI6YPL181W SBP1P10080 294 aaKnown RBP8.67□□□□□ -1.02
CTI6YPL181W ERG6P25087 383 aaKnown RBP8.67□□□□□ -1.02
CTI6YPL181W LTV1P34078 463 aa8.67□□□□□ -1.02
CTI6YPL181W TOR1P35169 2470 aa8.67□□□□□ -1.02
CTI6YPL181W YHR020WP38708 688 aaKnown RBP8.67□□□□□ -1.02
CTI6YPL181W EFM1P38732 585 aa8.67□□□□□ -1.02
CTI6YPL181W MUP3P38734 546 aa8.67□□□□□ -1.02
CTI6YPL181W HSE1P38753 452 aa8.67□□□□□ -1.02
CTI6YPL181W MPT5P39016 859 aaKnown RBP RIP-Chip data8.67□□□□□ -1.02not detected
CTI6YPL181W GAT1P43574 510 aa8.67□□□□□ -1.02
CTI6YPL181W NNF1P47149 201 aa8.67□□□□□ -1.02
CTI6YPL181W CSN9Q03981 162 aa8.67□□□□□ -1.02
CTI6YPL181W TAF11Q04226 346 aa8.67□□□□□ -1.02
CTI6YPL181W TRM12Q04235 462 aa8.67□□□□□ -1.02
CTI6YPL181W PIN2Q12057 282 aa8.67□□□□□ -1.02
CTI6YPL181W CHS5Q12114 671 aaKnown RBP8.67□□□□□ -1.02
CTI6YPL181W NOP58Q12499 511 aaKnown RBP8.67□□□□□ -1.02
CTI6YPL181W RSC6P25632 483 aa8.66□□□□□ -1.02
CTI6YPL181W PTM1P32857 523 aa8.66□□□□□ -1.02
CTI6YPL181W YEL073CP39974 107 aa8.66□□□□□ -1.02
CTI6YPL181W SUN4P53616 420 aa8.66□□□□□ -1.02
CTI6YPL181W ZRG17P53735 605 aa8.66□□□□□ -1.02
CTI6YPL181W YDR444WQ04093 687 aa8.66□□□□□ -1.02
CTI6YPL181W HPT1Q04178 221 aaKnown RBP8.66□□□□□ -1.02
CTI6YPL181W SPO20Q04359 397 aa8.66□□□□□ -1.02
CTI6YPL181W YOR223WQ12015 292 aa8.66□□□□□ -1.02
CTI6YPL181W RUD3Q12234 484 aaKnown RBP8.66□□□□□ -1.02
CTI6YPL181W POL2P21951 2222 aaKnown RBP8.66□□□□□ -1.02
CTI6YPL181W FUM1P08417 488 aaKnown RBP8.65□□□□□ -1.02
CTI6YPL181W SRV2P17555 526 aaKnown RBP8.65□□□□□ -1.02
CTI6YPL181W AAD3P25612 363 aa8.65□□□□□ -1.02
CTI6YPL181W MSH1P25846 959 aa8.65□□□□□ -1.02
CTI6YPL181W PHA2P32452 334 aa8.65□□□□□ -1.02
CTI6YPL181W MUM2P38236 366 aa8.65□□□□□ -1.02
CTI6YPL181W SUM1P46676 1062 aa8.65□□□□□ -1.02
CTI6YPL181W CIS3P47001 227 aa8.65□□□□□ -1.02
CTI6YPL181W LIA1P47120 325 aaKnown RBP8.65□□□□□ -1.02
CTI6YPL181W ECM9Q02202 377 aa8.65□□□□□ -1.02
CTI6YPL181W RNT1Q02555 471 aa8.65□□□□□ -1.02
CTI6YPL181W GOT1Q03554 138 aa8.65□□□□□ -1.02
CTI6YPL181W FAR8Q05040 523 aa8.65□□□□□ -1.02
CTI6YPL181W RTK1Q12100 620 aaPredicted RBP8.65□□□□□ -1.02
CTI6YPL181W MDY2Q12285 212 aa8.65□□□□□ -1.02
CTI6YPL181W SWI5P08153 709 aa8.64□□□□□ -1.03
CTI6YPL181W TRM1P15565 570 aaKnown RBP8.64□□□□□ -1.03
CTI6YPL181W SCL1P21243 252 aaKnown RBP8.64□□□□□ -1.03
CTI6YPL181W PPH21P23594 369 aa8.64□□□□□ -1.03
CTI6YPL181W KIP2P28743 706 aa8.64□□□□□ -1.03
CTI6YPL181W ASK1P35734 292 aa8.64□□□□□ -1.03
CTI6YPL181W YPT52P36018 234 aaKnown RBP8.64□□□□□ -1.03
CTI6YPL181W RPF2P36160 344 aaKnown RBP8.64□□□□□ -1.03
CTI6YPL181W PHO89P38361 574 aa8.64□□□□□ -1.03
CTI6YPL181W OAF1P39720 1047 aaPredicted RBP8.64□□□□□ -1.03
CTI6YPL181W MGS1P40151 587 aa8.64□□□□□ -1.03
CTI6YPL181W LTP1P40347 161 aa8.64□□□□□ -1.03
CTI6YPL181W TY4A-JP47023 414 aa8.64□□□□□ -1.03
CTI6YPL181W CLD1P53264 445 aa8.64□□□□□ -1.03
CTI6YPL181W HST3P53687 447 aa8.64□□□□□ -1.03
CTI6YPL181W TAF12Q03761 539 aa8.64□□□□□ -1.03
CTI6YPL181W THI73Q07904 523 aa8.64□□□□□ -1.03
CTI6YPL181W TEL1P38110 2787 aa8.64□□□□□ -1.03
CTI6YPL181W YAR066WP0CX18 203 aa8.64□□□□□ -1.03
CTI6YPL181W YHR214WP0CX19 203 aa8.64□□□□□ -1.03
CTI6YPL181W RED1P14291 827 aa8.64□□□□□ -1.03
CTI6YPL181W SNF5P18480 905 aa8.64□□□□□ -1.03
CTI6YPL181W RPB4P20433 221 aaPredicted RBP8.64□□□□□ -1.03
CTI6YPL181W YCR051WP25631 222 aa8.64□□□□□ -1.03
CTI6YPL181W ATP11P32453 318 aa8.64□□□□□ -1.03
CTI6YPL181W DED81P38707 554 aaKnown RBP8.64□□□□□ -1.03
CTI6YPL181W LIN1P38852 340 aaPredicted RBP8.64□□□□□ -1.03
CTI6YPL181W ELO1P39540 310 aa8.64□□□□□ -1.03
CTI6YPL181W UTP18P40362 594 aaPredicted RBP8.64□□□□□ -1.03
CTI6YPL181W NUP85P46673 744 aa8.64□□□□□ -1.03
CTI6YPL181W NHP10Q03435 203 aa8.64□□□□□ -1.03
CTI6YPL181W YMR155WQ03795 547 aa8.64□□□□□ -1.03
CTI6YPL181W YML096WQ04489 525 aa8.64□□□□□ -1.03
CTI6YPL181W UTP13Q05946 817 aaKnown RBP8.64□□□□□ -1.03
CTI6YPL181W OPT2Q06593 877 aa8.64□□□□□ -1.03
CTI6YPL181W GRS2Q06817 618 aa8.64□□□□□ -1.03
CTI6YPL181W NCA2Q12374 616 aa8.64□□□□□ -1.03
Retrieved 100 of 5,963 RNA–protein pairs in 23.7 ms