RNA–Protein interactions for RNA: YPL173W

MRPL40, Transcript of Mitochondrial ribosomal protein of the large subunit, yeastyeast

Gene MRPL40, Length 894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MRPL40YPL173W AAT1Q01802 451 aa3.12□□□□□ -1.91
MRPL40YPL173W BUD7Q08754 746 aa3.12□□□□□ -1.91
MRPL40YPL173W GET3Q12154 354 aaKnown RBP3.12□□□□□ -1.91
MRPL40YPL173W RRG1Q12167 365 aaPredicted RBP3.12□□□□□ -1.91
MRPL40YPL173W CRC1Q12289 327 aa3.12□□□□□ -1.91
MRPL40YPL173W RDL1Q12305 139 aaKnown RBP3.12□□□□□ -1.91
MRPL40YPL173W GRX6Q12438 231 aa3.12□□□□□ -1.91
MRPL40YPL173W YLR111WQ12528 110 aa3.12□□□□□ -1.91
MRPL40YPL173W YJR112W-AQ3E743 109 aa3.12□□□□□ -1.91
MRPL40YPL173W YAP1P19880 650 aaKnown RBP3.11□□□□□ -1.91
MRPL40YPL173W KGD1P20967 1014 aaKnown RBP3.11□□□□□ -1.91
MRPL40YPL173W YIH1P25637 258 aa3.11□□□□□ -1.91
MRPL40YPL173W PEP3P27801 918 aa3.11□□□□□ -1.91
MRPL40YPL173W SYN8P31377 255 aa3.11□□□□□ -1.91
MRPL40YPL173W LHS1P36016 881 aa3.11□□□□□ -1.91
MRPL40YPL173W AGP2P38090 596 aa3.11□□□□□ -1.91
MRPL40YPL173W APD1P38281 316 aa3.11□□□□□ -1.91
MRPL40YPL173W UIP3P39547 235 aa3.11□□□□□ -1.91
MRPL40YPL173W BUR6P40096 142 aa3.11□□□□□ -1.91
MRPL40YPL173W MET18P40469 1032 aa3.11□□□□□ -1.91
MRPL40YPL173W CIN1P40987 1014 aa3.11□□□□□ -1.91
MRPL40YPL173W ROK1P45818 564 aaPredicted RBP3.11□□□□□ -1.91
MRPL40YPL173W DPB11P47027 764 aaPredicted RBP3.11□□□□□ -1.91
MRPL40YPL173W IST1P53843 298 aaPredicted RBP3.11□□□□□ -1.91
MRPL40YPL173W ZDS2P54786 942 aa3.11□□□□□ -1.91
MRPL40YPL173W RPT6Q01939 405 aaKnown RBP3.11□□□□□ -1.91
MRPL40YPL173W MAK10Q02197 733 aa3.11□□□□□ -1.91
MRPL40YPL173W YLR455WQ06188 304 aa3.11□□□□□ -1.91
MRPL40YPL173W THI3Q07471 609 aa3.11□□□□□ -1.91
MRPL40YPL173W INP53Q12271 1107 aa3.11□□□□□ -1.91
MRPL40YPL173W RTN2Q12443 393 aa3.11□□□□□ -1.91
MRPL40YPL173W YPR089WO13585 888 aa3.1□□□□□ -1.91
MRPL40YPL173W HXK2P04807 486 aaKnown RBP3.1□□□□□ -1.91
MRPL40YPL173W DFR1P07807 211 aaKnown RBP RIP-Chip data3.1□□□□□ -1.91not detected
MRPL40YPL173W FUR1P18562 216 aaKnown RBP3.1□□□□□ -1.91
MRPL40YPL173W RPC53P25441 422 aa3.1□□□□□ -1.91
MRPL40YPL173W TIF3P34167 436 aaKnown RBP3.1□□□□□ -1.91
MRPL40YPL173W APT1P49435 187 aaKnown RBP3.1□□□□□ -1.91
MRPL40YPL173W EFM6P53970 246 aa3.1□□□□□ -1.91
MRPL40YPL173W YMR155WQ03795 547 aa3.1□□□□□ -1.91
MRPL40YPL173W BUD22Q04347 519 aaKnown RBP3.1□□□□□ -1.91
MRPL40YPL173W SCW10Q04951 389 aa3.1□□□□□ -1.91
MRPL40YPL173W BSP1Q06604 576 aa3.1□□□□□ -1.91
MRPL40YPL173W LUC7Q07508 261 aaPredicted RBP3.1□□□□□ -1.91
MRPL40YPL173W NDD1Q08887 554 aa3.1□□□□□ -1.91
MRPL40YPL173W HER1Q12276 1246 aa3.1□□□□□ -1.91
MRPL40YPL173W YOL159C-AQ3E769 90 aa3.1□□□□□ -1.91
MRPL40YPL173W YER145C-AA0A023PYF4 145 aa3.09□□□□□ -1.91
MRPL40YPL173W GPA1P08539 472 aa3.09□□□□□ -1.91
MRPL40YPL173W URE2P23202 354 aaKnown RBP3.09□□□□□ -1.91
MRPL40YPL173W VMA16P23968 213 aa3.09□□□□□ -1.91
MRPL40YPL173W STE50P25344 346 aa3.09□□□□□ -1.91
MRPL40YPL173W ADH7P25377 361 aa3.09□□□□□ -1.91
MRPL40YPL173W PUP3P25451 205 aaKnown RBP3.09□□□□□ -1.91
MRPL40YPL173W BYE1P36106 594 aa3.09□□□□□ -1.91
MRPL40YPL173W REG2P38232 338 aa3.09□□□□□ -1.91
MRPL40YPL173W ARP1P38696 384 aa3.09□□□□□ -1.91
MRPL40YPL173W ELO1P39540 310 aa3.09□□□□□ -1.91
MRPL40YPL173W AXL1P40851 1208 aa3.09□□□□□ -1.91
MRPL40YPL173W DIA3P52290 468 aa3.09□□□□□ -1.91
MRPL40YPL173W YGR066CP53242 292 aa3.09□□□□□ -1.91
MRPL40YPL173W EAF7P53911 425 aaKnown RBP3.09□□□□□ -1.91
MRPL40YPL173W YNL058CP53947 316 aa3.09□□□□□ -1.91
MRPL40YPL173W YTH1Q06102 208 aaPredicted RBP3.09□□□□□ -1.91
MRPL40YPL173W MF(ALPHA)1P01149 165 aa3.08□□□□□ -1.92
MRPL40YPL173W BI2P03873 423 aa3.08□□□□□ -1.92
MRPL40YPL173W MRP2P10663 115 aaPredicted RBP3.08□□□□□ -1.92
MRPL40YPL173W MRP13P12686 339 aa3.08□□□□□ -1.92
MRPL40YPL173W GPI10P30777 616 aa3.08□□□□□ -1.92
MRPL40YPL173W SSE2P32590 693 aaKnown RBP3.08□□□□□ -1.92
MRPL40YPL173W WBP1P33767 430 aaKnown RBP3.08□□□□□ -1.92
MRPL40YPL173W TCD2P36101 447 aaKnown RBP3.08□□□□□ -1.92
MRPL40YPL173W CST26P38226 397 aa3.08□□□□□ -1.92
MRPL40YPL173W DED81P38707 554 aaKnown RBP3.08□□□□□ -1.92
MRPL40YPL173W SMF1P38925 575 aa3.08□□□□□ -1.92
MRPL40YPL173W GPD2P41911 440 aaKnown RBP3.08□□□□□ -1.92
MRPL40YPL173W HOS2P53096 452 aaPredicted RBP3.08□□□□□ -1.92
MRPL40YPL173W YTP1P53584 459 aa3.08□□□□□ -1.92
MRPL40YPL173W YDR131CQ03899 556 aa3.08□□□□□ -1.92
MRPL40YPL173W VPS38Q05919 439 aa3.08□□□□□ -1.92
MRPL40YPL173W MRD1Q06106 887 aaKnown RBP3.08□□□□□ -1.92
MRPL40YPL173W YOR389WQ08912 624 aa3.08□□□□□ -1.92
MRPL40YPL173W FMP40Q08968 688 aaPredicted RBP3.08□□□□□ -1.92
MRPL40YPL173W SFI1Q12369 946 aa3.08□□□□□ -1.92
MRPL40YPL173W YER190C-BP0CX94 160 aa3.07□□□□□ -1.92
MRPL40YPL173W YEL077W-AP0CX95 160 aa3.07□□□□□ -1.92
MRPL40YPL173W YGR296C-BP0CX96 160 aa3.07□□□□□ -1.92
MRPL40YPL173W YPL283W-BP0CX97 160 aa3.07□□□□□ -1.92
MRPL40YPL173W YPR204C-AP0CX98 160 aa3.07□□□□□ -1.92
MRPL40YPL173W HOM3P10869 527 aa3.07□□□□□ -1.92
MRPL40YPL173W PDX1P16451 410 aa3.07□□□□□ -1.92
MRPL40YPL173W EST1P17214 699 aaPredicted RBP3.07□□□□□ -1.92
MRPL40YPL173W TKL1P23254 680 aaKnown RBP3.07□□□□□ -1.92
MRPL40YPL173W CLB2P24869 491 aa3.07□□□□□ -1.92
MRPL40YPL173W VMA8P32610 256 aaKnown RBP3.07□□□□□ -1.92
MRPL40YPL173W OCT1P35999 772 aa3.07□□□□□ -1.92
MRPL40YPL173W UBP11P36026 717 aa3.07□□□□□ -1.92
MRPL40YPL173W NUP133P36161 1157 aa3.07□□□□□ -1.92
MRPL40YPL173W VID24P38263 362 aa3.07□□□□□ -1.92
MRPL40YPL173W TSC10P38342 320 aa3.07□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 22 ms