RNA–Protein interactions for RNA: YPL104W

MSD1, Transcript of Mitochondrial aspartyl-tRNA synthetase, yeastyeast

Gene MSD1, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSD1YPL104W SRP68P38687 599 aaKnown RBP3.63□□□□□ -1.83
MSD1YPL104W JHD1P40034 492 aa3.63□□□□□ -1.83
MSD1YPL104W MMF1P40185 145 aaKnown RBP3.63□□□□□ -1.83
MSD1YPL104W BTT1P40314 149 aaPredicted RBP3.63□□□□□ -1.83
MSD1YPL104W YIR016WP40572 265 aa3.63□□□□□ -1.83
MSD1YPL104W UFE1P41834 346 aa3.63□□□□□ -1.83
MSD1YPL104W RSC8P43609 557 aaKnown RBP3.63□□□□□ -1.83
MSD1YPL104W DUG1P43616 481 aaKnown RBP3.63□□□□□ -1.83
MSD1YPL104W FAR3P46671 204 aa3.63□□□□□ -1.83
MSD1YPL104W DLD2P46681 530 aaKnown RBP3.63□□□□□ -1.83
MSD1YPL104W TRF5P48561 642 aaKnown RBP3.63□□□□□ -1.83
MSD1YPL104W GTR1Q00582 310 aa3.63□□□□□ -1.83
MSD1YPL104W YMR209CQ03648 457 aa3.63□□□□□ -1.83
MSD1YPL104W NHX1Q04121 633 aa3.63□□□□□ -1.83
MSD1YPL104W SPC24Q04477 213 aa3.63□□□□□ -1.83
MSD1YPL104W RSC3Q06639 885 aa3.63□□□□□ -1.83
MSD1YPL104W SWC7Q06707 132 aa3.63□□□□□ -1.83
MSD1YPL104W SLD7Q08457 257 aa3.63□□□□□ -1.83
MSD1YPL104W ALG6Q12001 544 aaKnown RBP3.63□□□□□ -1.83
MSD1YPL104W NOT5Q12514 560 aaPredicted RBP3.63□□□□□ -1.83
MSD1YPL104W RGS2Q99188 309 aa3.63□□□□□ -1.83
MSD1YPL104W COX5AP00424 153 aa3.62□□□□□ -1.83
MSD1YPL104W RPL11AP0C0W9 174 aaKnown RBP3.62□□□□□ -1.83
MSD1YPL104W ATP12P22135 325 aa3.62□□□□□ -1.83
MSD1YPL104W PDE1P22434 369 aa3.62□□□□□ -1.83
MSD1YPL104W SEC14P24280 304 aaKnown RBP3.62□□□□□ -1.83
MSD1YPL104W HRR25P29295 494 aaKnown RBP3.62□□□□□ -1.83
MSD1YPL104W MVD1P32377 396 aaKnown RBP3.62□□□□□ -1.83
MSD1YPL104W PHA2P32452 334 aa3.62□□□□□ -1.83
MSD1YPL104W PDB1P32473 366 aaKnown RBP3.62□□□□□ -1.83
MSD1YPL104W GDA1P32621 518 aa3.62□□□□□ -1.83
MSD1YPL104W YSC84P32793 468 aa3.62□□□□□ -1.83
MSD1YPL104W BEM3P32873 1128 aa3.62□□□□□ -1.83
MSD1YPL104W AFR1P33304 620 aa3.62□□□□□ -1.83
MSD1YPL104W PHO89P38361 574 aa3.62□□□□□ -1.83
MSD1YPL104W YAR028WP39548 234 aa3.62□□□□□ -1.83
MSD1YPL104W MEF2P39677 819 aa3.62□□□□□ -1.83
MSD1YPL104W NUP60P39705 539 aa3.62□□□□□ -1.83
MSD1YPL104W ECM1P39715 212 aa3.62□□□□□ -1.83
MSD1YPL104W ELO3P40319 345 aa3.62□□□□□ -1.83
MSD1YPL104W SEC28P40509 296 aaKnown RBP3.62□□□□□ -1.83
MSD1YPL104W CHS6P40955 746 aa3.62□□□□□ -1.83
MSD1YPL104W CAF16P43569 289 aa3.62□□□□□ -1.83
MSD1YPL104W ARC1P46672 376 aaKnown RBP3.62□□□□□ -1.83
MSD1YPL104W PRP24P49960 444 aaKnown RBP3.62□□□□□ -1.83
MSD1YPL104W TIM13P53299 105 aa3.62□□□□□ -1.83
MSD1YPL104W GND2P53319 492 aa3.62□□□□□ -1.83
MSD1YPL104W BUD32P53323 261 aa3.62□□□□□ -1.83
MSD1YPL104W CDC14Q00684 551 aa3.62□□□□□ -1.83
MSD1YPL104W SRP1Q02821 542 aaKnown RBP3.62□□□□□ -1.83
MSD1YPL104W EMI2Q04409 500 aaKnown RBP3.62□□□□□ -1.83
MSD1YPL104W PGC1Q08959 321 aa3.62□□□□□ -1.83
MSD1YPL104W NDJ1Q12366 352 aa3.62□□□□□ -1.83
MSD1YPL104W OCA6Q12454 224 aa3.62□□□□□ -1.83
MSD1YPL104W RPL11BQ3E757 174 aaPredicted RBP3.62□□□□□ -1.83
MSD1YPL104W RAD3P06839 778 aa3.62□□□□□ -1.83
MSD1YPL104W MIS1P09440 975 aaKnown RBP3.62□□□□□ -1.83
MSD1YPL104W APA1P16550 321 aaKnown RBP3.62□□□□□ -1.83
MSD1YPL104W NPP1P25353 742 aa3.62□□□□□ -1.83
MSD1YPL104W SNT1P25357 1226 aa3.62□□□□□ -1.83
MSD1YPL104W REC104P33323 182 aa3.62□□□□□ -1.83
MSD1YPL104W RIM2P38127 377 aa3.62□□□□□ -1.83
MSD1YPL104W MRP21P38175 177 aa3.62□□□□□ -1.83
MSD1YPL104W EXO84P38261 753 aa3.62□□□□□ -1.83
MSD1YPL104W RFC3P38629 340 aa3.62□□□□□ -1.83
MSD1YPL104W YHL041WP38730 149 aa3.62□□□□□ -1.83
MSD1YPL104W YHI9P38765 294 aa3.62□□□□□ -1.83
MSD1YPL104W SFB3P38810 929 aa3.62□□□□□ -1.83
MSD1YPL104W IST3P40565 148 aaPredicted RBP3.62□□□□□ -1.83
MSD1YPL104W BST1P43571 1029 aa3.62□□□□□ -1.83
MSD1YPL104W NIT2P47016 307 aa3.62□□□□□ -1.83
MSD1YPL104W CCT8P47079 568 aaKnown RBP3.62□□□□□ -1.83
MSD1YPL104W PBP1P53297 722 aaKnown RBP3.62□□□□□ -1.83
MSD1YPL104W SOK2P53438 785 aaPredicted RBP3.62□□□□□ -1.83
MSD1YPL104W TRM112P53738 135 aaPredicted RBP3.62□□□□□ -1.83
MSD1YPL104W IST1P53843 298 aaPredicted RBP3.62□□□□□ -1.83
MSD1YPL104W EFM6P53970 246 aa3.62□□□□□ -1.83
MSD1YPL104W TRS31Q03337 283 aa3.62□□□□□ -1.83
MSD1YPL104W TVP15Q03860 143 aa3.62□□□□□ -1.83
MSD1YPL104W GTB1Q04924 702 aa3.62□□□□□ -1.83
MSD1YPL104W ECM38Q05902 660 aaPredicted RBP3.62□□□□□ -1.83
MSD1YPL104W YLR257WQ06146 321 aaKnown RBP3.62□□□□□ -1.83
MSD1YPL104W YLR177WQ06251 628 aa3.62□□□□□ -1.83
MSD1YPL104W LDB18Q07887 179 aa3.62□□□□□ -1.83
MSD1YPL104W RIB2Q12362 591 aaKnown RBP3.62□□□□□ -1.83
MSD1YPL104W LPX1Q12405 387 aaKnown RBP3.62□□□□□ -1.83
MSD1YPL104W YMR030W-AQ3E760 96 aa3.62□□□□□ -1.83
MSD1YPL104W MTF1P14908 341 aaKnown RBP3.61□□□□□ -1.83
MSD1YPL104W HSP26P15992 214 aaKnown RBP RIP-Chip data3.61□□□□□ -1.83not detected
MSD1YPL104W CLN1P20437 546 aa3.61□□□□□ -1.83
MSD1YPL104W AAT2P23542 418 aaKnown RBP3.61□□□□□ -1.83
MSD1YPL104W MET22P32179 357 aa3.61□□□□□ -1.83
MSD1YPL104W CDC12P32468 407 aaKnown RBP3.61□□□□□ -1.83
MSD1YPL104W KAR9P32526 644 aa3.61□□□□□ -1.83
MSD1YPL104W SGE1P33335 543 aa3.61□□□□□ -1.83
MSD1YPL104W PTH2P34222 208 aa3.61□□□□□ -1.83
MSD1YPL104W MED8P38304 223 aa3.61□□□□□ -1.83
MSD1YPL104W GPP2P40106 250 aaKnown RBP3.61□□□□□ -1.83
MSD1YPL104W HOS4P40480 1083 aa3.61□□□□□ -1.83
MSD1YPL104W FAF1P40546 346 aaPredicted RBP3.61□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 38.9 ms