RNA–Protein interactions for RNA: YOR290C

SNF2, Transcript of Catalytic subunit of the SWI/SNF chromatin remodeling complex, yeast

Gene SNF2, Length 5,112 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNF2	YOR290C	PHO13	P19881	312 aa		4.06	□□□□□ -1.76
SNF2	YOR290C	FAR1	P21268	830 aa		4.06	□□□□□ -1.76
SNF2	YOR290C	NUP2	P32499	720 aa		4.06	□□□□□ -1.76
SNF2	YOR290C	STE5	P32917	917 aa		4.06	□□□□□ -1.76
SNF2	YOR290C	YBR284W	P38150	797 aa		4.06	□□□□□ -1.76
SNF2	YOR290C	RMD8	P43620	662 aa		4.06	□□□□□ -1.76
SNF2	YOR290C	HSV2	P50079	448 aa	Predicted RBP	4.06	□□□□□ -1.76
SNF2	YOR290C	RAS2	P01120	322 aa	Known RBP	4.06	□□□□□ -1.76
SNF2	YOR290C	PAB1	P04147	577 aa	Known RBP RIP-Chip data	4.06	□□□□□ -1.76	not detected
SNF2	YOR290C	ZWF1	P11412	505 aa	Known RBP	4.06	□□□□□ -1.76
SNF2	YOR290C	VPS1	P21576	704 aa	Known RBP	4.06	□□□□□ -1.76
SNF2	YOR290C	PHO91	P27514	894 aa		4.06	□□□□□ -1.76
SNF2	YOR290C	OXP1	P28273	1286 aa		4.06	□□□□□ -1.76
SNF2	YOR290C	TSC10	P38342	320 aa		4.06	□□□□□ -1.76
SNF2	YOR290C	NSG1	P38837	291 aa		4.06	□□□□□ -1.76
SNF2	YOR290C	GTT1	P40582	234 aa		4.06	□□□□□ -1.76
SNF2	YOR290C	PMT6	P42934	759 aa		4.06	□□□□□ -1.76
SNF2	YOR290C	MPP6	P53725	186 aa	Predicted RBP	4.06	□□□□□ -1.76
SNF2	YOR290C	YDC1	Q02896	317 aa		4.06	□□□□□ -1.76
SNF2	YOR290C	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	4.06	□□□□□ -1.76	not detected
SNF2	YOR290C	PEX10	Q05568	337 aa		4.06	□□□□□ -1.76
SNF2	YOR290C	DIB1	Q06819	143 aa	Predicted RBP	4.06	□□□□□ -1.76
SNF2	YOR290C	SIL1	Q08199	421 aa		4.06	□□□□□ -1.76
SNF2	YOR290C	CRT10	Q08226	957 aa		4.06	□□□□□ -1.76
SNF2	YOR290C	YPL272C	Q08984	517 aa		4.06	□□□□□ -1.76
SNF2	YOR290C	HFI1	Q12060	488 aa		4.06	□□□□□ -1.76
SNF2	YOR290C	APC11	Q12157	165 aa		4.06	□□□□□ -1.76
SNF2	YOR290C	SCM3	Q12334	223 aa		4.06	□□□□□ -1.76
SNF2	YOR290C	AFI1	Q99222	893 aa		4.06	□□□□□ -1.76
SNF2	YOR290C	REP1	P03871	373 aa		4.06	□□□□□ -1.76
SNF2	YOR290C	SCEI	P03882	235 aa		4.06	□□□□□ -1.76
SNF2	YOR290C	RPP1B	P10622	106 aa	Known RBP	4.06	□□□□□ -1.76
SNF2	YOR290C	APA1	P16550	321 aa	Known RBP	4.06	□□□□□ -1.76
SNF2	YOR290C	FUS3	P16892	353 aa	Known RBP	4.06	□□□□□ -1.76
SNF2	YOR290C	REC107	P21651	314 aa		4.06	□□□□□ -1.76
SNF2	YOR290C	CWH43	P25618	953 aa		4.06	□□□□□ -1.76
SNF2	YOR290C	URK1	P27515	501 aa		4.06	□□□□□ -1.76
SNF2	YOR290C	DBF20	P32328	564 aa		4.06	□□□□□ -1.76
SNF2	YOR290C	HMX1	P32339	317 aa		4.06	□□□□□ -1.76
SNF2	YOR290C	MSS1	P32559	526 aa	Predicted RBP	4.06	□□□□□ -1.76
SNF2	YOR290C	PHO11	P35842	467 aa		4.06	□□□□□ -1.76
SNF2	YOR290C	LSM2	P38203	95 aa	Known RBP	4.06	□□□□□ -1.76
SNF2	YOR290C	URA8	P38627	578 aa	Predicted RBP	4.06	□□□□□ -1.76
SNF2	YOR290C	UBP9	P39967	754 aa		4.06	□□□□□ -1.76
SNF2	YOR290C	SPT20	P50875	604 aa		4.06	□□□□□ -1.76
SNF2	YOR290C	IMA1	P53051	589 aa		4.06	□□□□□ -1.76
SNF2	YOR290C	GPI1	P53306	609 aa		4.06	□□□□□ -1.76
SNF2	YOR290C	CNL1	Q06333	122 aa		4.06	□□□□□ -1.76
SNF2	YOR290C	SRO7	Q12038	1033 aa		4.06	□□□□□ -1.76
SNF2	YOR290C	GPR1	Q12361	961 aa		4.06	□□□□□ -1.76
SNF2	YOR290C	BPH1	P25356	2167 aa		4.05	□□□□□ -1.76
SNF2	YOR290C	HKR1	P41809	1802 aa		4.05	□□□□□ -1.76
SNF2	YOR290C	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.05	□□□□□ -1.76	not detected
SNF2	YOR290C	GBP2	P25555	427 aa	Known RBP RIP-Chip data	4.05	□□□□□ -1.76	not detected
SNF2	YOR290C	VAC17	P25591	423 aa		4.05	□□□□□ -1.76
SNF2	YOR290C	EUG1	P32474	517 aa		4.05	□□□□□ -1.76
SNF2	YOR290C	ERG1	P32476	496 aa	Known RBP	4.05	□□□□□ -1.76
SNF2	YOR290C	NAB2	P32505	525 aa	Known RBP RIP-Chip data	4.05	□□□□□ -1.76	not detected
SNF2	YOR290C	TKL2	P33315	681 aa		4.05	□□□□□ -1.76
SNF2	YOR290C	POL12	P38121	705 aa	Predicted RBP	4.05	□□□□□ -1.76
SNF2	YOR290C	MED8	P38304	223 aa		4.05	□□□□□ -1.76
SNF2	YOR290C	RCK2	P38623	610 aa		4.05	□□□□□ -1.76
SNF2	YOR290C	EMC2	P47133	292 aa	Known RBP	4.05	□□□□□ -1.76
SNF2	YOR290C	YJR142W	P47173	342 aa		4.05	□□□□□ -1.76
SNF2	YOR290C	OGG1	P53397	376 aa	Predicted RBP	4.05	□□□□□ -1.76
SNF2	YOR290C	AIM11	P87275	137 aa		4.05	□□□□□ -1.76
SNF2	YOR290C	TIM50	Q02776	476 aa		4.05	□□□□□ -1.76
SNF2	YOR290C	NAM2	P11325	894 aa		4.05	□□□□□ -1.76
SNF2	YOR290C	THR4	P16120	514 aa	Known RBP	4.05	□□□□□ -1.76
SNF2	YOR290C	PCL1	P24867	279 aa		4.05	□□□□□ -1.76
SNF2	YOR290C	SWI4	P25302	1093 aa	Known RBP	4.05	□□□□□ -1.76
SNF2	YOR290C	MNS1	P32906	549 aa		4.05	□□□□□ -1.76
SNF2	YOR290C	MIX23	P38162	196 aa		4.05	□□□□□ -1.76
SNF2	YOR290C	YHR218W	P38899	603 aa		4.05	□□□□□ -1.76
SNF2	YOR290C	PTI1	P39927	425 aa	Predicted RBP	4.05	□□□□□ -1.76
SNF2	YOR290C	IRC8	P47046	822 aa		4.05	□□□□□ -1.76
SNF2	YOR290C	YNL040W	P53960	456 aa	Predicted RBP	4.05	□□□□□ -1.76
SNF2	YOR290C	TIM10	P87108	93 aa		4.05	□□□□□ -1.76
SNF2	YOR290C	ARO80	Q04052	950 aa		4.05	□□□□□ -1.76
SNF2	YOR290C	PEX12	Q04370	399 aa		4.05	□□□□□ -1.76
SNF2	YOR290C	SPC2	Q04969	178 aa		4.05	□□□□□ -1.76
SNF2	YOR290C	RBS1	Q05672	457 aa	Known RBP	4.05	□□□□□ -1.76
SNF2	YOR290C	SGT2	Q12118	346 aa	Known RBP	4.05	□□□□□ -1.76
SNF2	YOR290C	CDC33	P07260	213 aa	Known RBP	4.05	□□□□□ -1.76
SNF2	YOR290C	NTG1	P31378	399 aa		4.05	□□□□□ -1.76
SNF2	YOR290C	VFA1	P40080	203 aa		4.05	□□□□□ -1.76
SNF2	YOR290C	CHS6	P40955	746 aa		4.05	□□□□□ -1.76
SNF2	YOR290C	VMA13	P41807	478 aa	Known RBP	4.05	□□□□□ -1.76
SNF2	YOR290C	COQ6	P53318	479 aa		4.05	□□□□□ -1.76
SNF2	YOR290C	RPT6	Q01939	405 aa	Known RBP	4.05	□□□□□ -1.76
SNF2	YOR290C	FOX2	Q02207	900 aa	Known RBP	4.05	□□□□□ -1.76
SNF2	YOR290C	ABF2	Q02486	183 aa		4.05	□□□□□ -1.76
SNF2	YOR290C	YPL109C	Q02981	657 aa		4.05	□□□□□ -1.76
SNF2	YOR290C	YML083C	Q04526	418 aa		4.05	□□□□□ -1.76
SNF2	YOR290C	YPR091C	Q06833	770 aa		4.05	□□□□□ -1.76
SNF2	YOR290C	CRD1	Q07560	283 aa		4.05	□□□□□ -1.76
SNF2	YOR290C	MLH3	Q12083	715 aa		4.05	□□□□□ -1.76
SNF2	YOR290C	RPL7B	Q12213	244 aa	Known RBP	4.05	□□□□□ -1.76
SNF2	YOR290C	PCL9	Q12477	304 aa		4.05	□□□□□ -1.76
SNF2	YOR290C	SFG1	Q12507	346 aa		4.05	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 17.5 ms