RNA–Protein interactions for RNA: YOR272W

YTM1, Transcript of Constituent of 66S pre-ribosomal particles, yeast

Gene YTM1, Length 1,383 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YTM1	YOR272W	GSH1	P32477	678 aa		4.27	□□□□□ -1.73
YTM1	YOR272W	TOA1	P32773	286 aa		4.27	□□□□□ -1.73
YTM1	YOR272W	TEF4	P36008	412 aa	Known RBP	4.27	□□□□□ -1.73
YTM1	YOR272W	HEL1	P36113	551 aa		4.27	□□□□□ -1.73
YTM1	YOR272W	EXO84	P38261	753 aa		4.27	□□□□□ -1.73
YTM1	YOR272W	IFA38	P38286	347 aa		4.27	□□□□□ -1.73
YTM1	YOR272W	IST3	P40565	148 aa	Predicted RBP	4.27	□□□□□ -1.73
YTM1	YOR272W	BNA3	P47039	444 aa	Known RBP	4.27	□□□□□ -1.73
YTM1	YOR272W	ASE1	P50275	885 aa		4.27	□□□□□ -1.73
YTM1	YOR272W	COG1	P53079	417 aa		4.27	□□□□□ -1.73
YTM1	YOR272W	DCP2	P53550	970 aa	Known RBP	4.27	□□□□□ -1.73
YTM1	YOR272W	HEF3	P53978	1044 aa	Known RBP	4.27	□□□□□ -1.73
YTM1	YOR272W	GTR1	Q00582	310 aa		4.27	□□□□□ -1.73
YTM1	YOR272W	SNU56	Q03782	492 aa	Known RBP	4.27	□□□□□ -1.73
YTM1	YOR272W	SIR4	P11978	1358 aa		4.27	□□□□□ -1.73
YTM1	YOR272W	ARD1	P07347	238 aa	Predicted RBP	4.27	□□□□□ -1.73
YTM1	YOR272W	TY2A-LR1	P0C2J4	438 aa		4.27	□□□□□ -1.73
YTM1	YOR272W	TY2A-F	P0CX61	438 aa		4.27	□□□□□ -1.73
YTM1	YOR272W	TY2A-GR2	P0CX62	438 aa		4.27	□□□□□ -1.73
YTM1	YOR272W	MDM10	P18409	493 aa		4.27	□□□□□ -1.73
YTM1	YOR272W	TY2A-C	P25383	438 aa		4.27	□□□□□ -1.73
YTM1	YOR272W	RFA2	P26754	273 aa	Known RBP	4.27	□□□□□ -1.73
YTM1	YOR272W	RPT3	P33298	428 aa	Known RBP	4.27	□□□□□ -1.73
YTM1	YOR272W	TOM71	P38825	639 aa	Known RBP	4.27	□□□□□ -1.73
YTM1	YOR272W	KAP123	P40069	1113 aa	Known RBP	4.27	□□□□□ -1.73
YTM1	YOR272W	PSA1	P41940	361 aa	Known RBP	4.27	□□□□□ -1.73
YTM1	YOR272W	RSC9	Q03124	581 aa		4.27	□□□□□ -1.73
YTM1	YOR272W	TY2A-DR2	Q03483	438 aa		4.27	□□□□□ -1.73
YTM1	YOR272W	INP2	Q03824	705 aa		4.27	□□□□□ -1.73
YTM1	YOR272W	STP3	Q05937	343 aa		4.27	□□□□□ -1.73
YTM1	YOR272W	NKP2	Q06162	153 aa		4.27	□□□□□ -1.73
YTM1	YOR272W	TFC6	Q06339	672 aa		4.27	□□□□□ -1.73
YTM1	YOR272W	THI3	Q07471	609 aa		4.27	□□□□□ -1.73
YTM1	YOR272W	TY2A-B	Q12260	438 aa		4.27	□□□□□ -1.73
YTM1	YOR272W	TY2A-OR2	Q12293	438 aa		4.27	□□□□□ -1.73
YTM1	YOR272W	TY2A-DR1	Q12392	438 aa		4.27	□□□□□ -1.73
YTM1	YOR272W	TY2A-OR1	Q12439	438 aa		4.27	□□□□□ -1.73
YTM1	YOR272W	ERG27	Q12452	347 aa	Known RBP	4.27	□□□□□ -1.73
YTM1	YOR272W	TY2A-DR3	Q99303	438 aa		4.27	□□□□□ -1.73
YTM1	YOR272W	RNR2	P09938	399 aa	Known RBP	4.26	□□□□□ -1.73
YTM1	YOR272W	KRS1	P15180	591 aa	Known RBP	4.26	□□□□□ -1.73
YTM1	YOR272W	MSS51	P32335	436 aa		4.26	□□□□□ -1.73
YTM1	YOR272W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	4.26	□□□□□ -1.73	not detected
YTM1	YOR272W	GEX2	P36173	615 aa		4.26	□□□□□ -1.73
YTM1	YOR272W	NPR2	P39923	615 aa		4.26	□□□□□ -1.73
YTM1	YOR272W	RTR1	P40084	226 aa	Predicted RBP	4.26	□□□□□ -1.73
YTM1	YOR272W	ASG1	P40467	964 aa		4.26	□□□□□ -1.73
YTM1	YOR272W	ORC5	P50874	479 aa		4.26	□□□□□ -1.73
YTM1	YOR272W	PSP1	P50896	841 aa	Known RBP	4.26	□□□□□ -1.73
YTM1	YOR272W	RRB1	Q04225	511 aa	Known RBP	4.26	□□□□□ -1.73
YTM1	YOR272W	CMS1	Q07897	291 aa	Known RBP	4.26	□□□□□ -1.73
YTM1	YOR272W	ATG9	Q12142	997 aa		4.26	□□□□□ -1.73
YTM1	YOR272W	SNF1	P06782	633 aa	Known RBP	4.25	□□□□□ -1.73
YTM1	YOR272W	RPS24A	P0CX31	135 aa	Known RBP	4.25	□□□□□ -1.73
YTM1	YOR272W	RPS24B	P0CX32	135 aa	Known RBP	4.25	□□□□□ -1.73
YTM1	YOR272W	BRF1	P29056	596 aa		4.25	□□□□□ -1.73
YTM1	YOR272W	CNS1	P33313	385 aa		4.25	□□□□□ -1.73
YTM1	YOR272W	SLC1	P33333	303 aa		4.25	□□□□□ -1.73
YTM1	YOR272W	TFC3	P34111	1160 aa		4.25	□□□□□ -1.73
YTM1	YOR272W	YRB1	P41920	201 aa	Known RBP	4.25	□□□□□ -1.73
YTM1	YOR272W	NET1	P47035	1189 aa		4.25	□□□□□ -1.73
YTM1	YOR272W	JJJ1	P53863	590 aa		4.25	□□□□□ -1.73
YTM1	YOR272W	SUB1	P54000	292 aa	Known RBP	4.25	□□□□□ -1.73
YTM1	YOR272W	ADE16	P54113	591 aa	Known RBP	4.25	□□□□□ -1.73
YTM1	YOR272W	YML131W	Q03102	365 aa		4.25	□□□□□ -1.73
YTM1	YOR272W	VID22	Q05934	901 aa		4.25	□□□□□ -1.73
YTM1	YOR272W	TMA16	Q08687	178 aa		4.25	□□□□□ -1.73
YTM1	YOR272W	NKP1	Q12493	238 aa		4.25	□□□□□ -1.73
YTM1	YOR272W	PCD1	Q12524	340 aa		4.25	□□□□□ -1.73
YTM1	YOR272W	DUR1,2	P32528	1835 aa	Known RBP	4.24	□□□□□ -1.73
YTM1	YOR272W	CDC37	P06101	506 aa	Known RBP	4.24	□□□□□ -1.73
YTM1	YOR272W	FRS2	P15625	503 aa	Known RBP	4.24	□□□□□ -1.73
YTM1	YOR272W	CDC60	P26637	1090 aa	Known RBP	4.24	□□□□□ -1.73
YTM1	YOR272W	COQ3	P27680	312 aa		4.24	□□□□□ -1.73
YTM1	YOR272W	KAR9	P32526	644 aa		4.24	□□□□□ -1.73
YTM1	YOR272W	MUD2	P36084	527 aa	Known RBP	4.24	□□□□□ -1.73
YTM1	YOR272W	PIM1	P36775	1133 aa		4.24	□□□□□ -1.73
YTM1	YOR272W	ERV46	P39727	415 aa		4.24	□□□□□ -1.73
YTM1	YOR272W	RIC1	P40395	1056 aa		4.24	□□□□□ -1.73
YTM1	YOR272W	UBP7	P40453	1071 aa		4.24	□□□□□ -1.73
YTM1	YOR272W	BNA1	P47096	177 aa		4.24	□□□□□ -1.73
YTM1	YOR272W	IST1	P53843	298 aa	Predicted RBP	4.24	□□□□□ -1.73
YTM1	YOR272W	TIM11	P81449	96 aa	Predicted RBP	4.24	□□□□□ -1.73
YTM1	YOR272W	KRE28	Q04431	385 aa		4.24	□□□□□ -1.73
YTM1	YOR272W	SFH1	Q06168	426 aa		4.24	□□□□□ -1.73
YTM1	YOR272W	SWA2	Q06677	668 aa		4.24	□□□□□ -1.73
YTM1	YOR272W	PSR1	Q07800	427 aa		4.24	□□□□□ -1.73
YTM1	YOR272W	ABP140	Q08641	628 aa	Known RBP	4.24	□□□□□ -1.73
YTM1	YOR272W	CTI6	Q08923	506 aa		4.24	□□□□□ -1.73
YTM1	YOR272W	TRM8	Q12009	286 aa		4.24	□□□□□ -1.73
YTM1	YOR272W	CFT2	Q12102	859 aa	Predicted RBP	4.24	□□□□□ -1.73
YTM1	YOR272W	SMC6	Q12749	1114 aa		4.24	□□□□□ -1.73
YTM1	YOR272W	PDR18	P53756	1333 aa		4.23	□□□□□ -1.73
YTM1	YOR272W	SUI3	P09064	285 aa	Known RBP	4.23	□□□□□ -1.73
YTM1	YOR272W	YMR085W	P0CF18	432 aa		4.23	□□□□□ -1.73
YTM1	YOR272W	PMR1	P13586	950 aa		4.23	□□□□□ -1.73
YTM1	YOR272W	HSC82	P15108	705 aa	Known RBP	4.23	□□□□□ -1.73
YTM1	YOR272W	PRP16	P15938	1071 aa	Predicted RBP	4.23	□□□□□ -1.73
YTM1	YOR272W	YSP3	P25036	478 aa		4.23	□□□□□ -1.73
YTM1	YOR272W	RER1	P25560	188 aa		4.23	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 11.1 ms