RNA–Protein interactions for RNA: YOR156C

NFI1, Transcript of SUMO E3 ligase, yeastyeast

Gene NFI1, Length 2,181 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NFI1YOR156C SGN1P40561 250 aaKnown RBP RIP-Chip data5.16□□□□□ -1.58not detected
NFI1YOR156C SEG1Q04279 960 aa5.16□□□□□ -1.58
NFI1YOR156C THI7Q05998 598 aa5.16□□□□□ -1.58
NFI1YOR156C PGA3Q12746 312 aaKnown RBP5.16□□□□□ -1.58
NFI1YOR156C CKA1P15790 372 aa5.15□□□□□ -1.58
NFI1YOR156C SSE2P32590 693 aaKnown RBP5.15□□□□□ -1.58
NFI1YOR156C YKL050CP35736 922 aa5.15□□□□□ -1.58
NFI1YOR156C ARF3P40994 183 aaRIP-Chip data5.15□□□□□ -1.58not detected
NFI1YOR156C NNF2P53253 936 aa5.15□□□□□ -1.58
NFI1YOR156C RPT6Q01939 405 aaKnown RBP5.15□□□□□ -1.58
NFI1YOR156C SCM3Q12334 223 aa5.15□□□□□ -1.58
NFI1YOR156C MET17P06106 444 aa5.15□□□□□ -1.59
NFI1YOR156C PUP3P25451 205 aaKnown RBP5.15□□□□□ -1.59
NFI1YOR156C PGS1P25578 521 aa5.15□□□□□ -1.59
NFI1YOR156C RPS10BP46784 105 aaKnown RBP5.15□□□□□ -1.59
NFI1YOR156C IRC8P47046 822 aa5.15□□□□□ -1.59
NFI1YOR156C FMP40Q08968 688 aaPredicted RBP5.15□□□□□ -1.59
NFI1YOR156C LEU9Q12166 604 aaKnown RBP5.15□□□□□ -1.59
NFI1YOR156C RRI1Q12468 440 aa5.15□□□□□ -1.59
NFI1YOR156C FOB1O13329 566 aa5.14□□□□□ -1.59
NFI1YOR156C ROX1P25042 368 aa5.14□□□□□ -1.59
NFI1YOR156C REG2P38232 338 aa5.14□□□□□ -1.59
NFI1YOR156C MET28P40573 187 aa5.14□□□□□ -1.59
NFI1YOR156C APT1P49435 187 aaKnown RBP5.14□□□□□ -1.59
NFI1YOR156C COP1P53622 1201 aaKnown RBP5.14□□□□□ -1.59
NFI1YOR156C RIM13Q03792 727 aa5.14□□□□□ -1.59
NFI1YOR156C DPB4Q04603 196 aaKnown RBP5.14□□□□□ -1.59
NFI1YOR156C SWF1Q04629 336 aa5.14□□□□□ -1.59
NFI1YOR156C YLR287CQ05881 355 aa5.14□□□□□ -1.59
NFI1YOR156C EST1P17214 699 aaPredicted RBP5.14□□□□□ -1.59
NFI1YOR156C SPE2P21182 396 aa5.14□□□□□ -1.59
NFI1YOR156C TIF3P34167 436 aaKnown RBP5.14□□□□□ -1.59
NFI1YOR156C MIA40P36046 403 aa5.14□□□□□ -1.59
NFI1YOR156C LYS20P48570 428 aaKnown RBP5.14□□□□□ -1.59
NFI1YOR156C YGR066CP53242 292 aa5.14□□□□□ -1.59
NFI1YOR156C RPS10AQ08745 105 aaPredicted RBP5.14□□□□□ -1.59
NFI1YOR156C APL4Q12028 832 aa5.14□□□□□ -1.59
NFI1YOR156C HSH49Q99181 213 aaPredicted RBP5.14□□□□□ -1.59
NFI1YOR156C MF(ALPHA)1P01149 165 aa5.13□□□□□ -1.59
NFI1YOR156C LCB1P25045 558 aaKnown RBP5.13□□□□□ -1.59
NFI1YOR156C NPL6P32832 435 aa5.13□□□□□ -1.59
NFI1YOR156C YBR144CP34215 104 aa5.13□□□□□ -1.59
NFI1YOR156C ANS1P38832 159 aa5.13□□□□□ -1.59
NFI1YOR156C UTP9P38882 575 aaKnown RBP5.13□□□□□ -1.59
NFI1YOR156C CFD1P40558 293 aa5.13□□□□□ -1.59
NFI1YOR156C FAR3P46671 204 aa5.13□□□□□ -1.59
NFI1YOR156C UBP8P50102 471 aa5.13□□□□□ -1.59
NFI1YOR156C HOS2P53096 452 aaPredicted RBP5.13□□□□□ -1.59
NFI1YOR156C CAC2Q04199 468 aa5.13□□□□□ -1.59
NFI1YOR156C ADE13Q05911 482 aaKnown RBP5.13□□□□□ -1.59
NFI1YOR156C DFR1P07807 211 aaKnown RBP RIP-Chip data5.12□□□□□ -1.59not detected
NFI1YOR156C ERG3P32353 365 aa5.12□□□□□ -1.59
NFI1YOR156C AFG3P39925 761 aa5.12□□□□□ -1.59
NFI1YOR156C HXT9P40885 567 aa5.12□□□□□ -1.59
NFI1YOR156C GRX6Q12438 231 aa5.12□□□□□ -1.59
NFI1YOR156C YAP1P19880 650 aaKnown RBP5.12□□□□□ -1.59
NFI1YOR156C NUP133P36161 1157 aa5.12□□□□□ -1.59
NFI1YOR156C YIL024CP40543 189 aa5.12□□□□□ -1.59
NFI1YOR156C ROK1P45818 564 aaPredicted RBP5.12□□□□□ -1.59
NFI1YOR156C ERG13P54839 491 aaKnown RBP5.12□□□□□ -1.59
NFI1YOR156C VTC3Q02725 835 aa5.12□□□□□ -1.59
NFI1YOR156C LGE1Q02796 332 aaKnown RBP5.12□□□□□ -1.59
NFI1YOR156C VPS38Q05919 439 aa5.12□□□□□ -1.59
NFI1YOR156C TCD2P36101 447 aaKnown RBP5.11□□□□□ -1.59
NFI1YOR156C LEU5P38702 357 aa5.11□□□□□ -1.59
NFI1YOR156C ULP2P40537 1034 aaPredicted RBP5.11□□□□□ -1.59
NFI1YOR156C MAF1P41910 395 aa5.11□□□□□ -1.59
NFI1YOR156C VID30P53076 958 aa5.11□□□□□ -1.59
NFI1YOR156C MSC1Q03104 513 aa5.11□□□□□ -1.59
NFI1YOR156C SYF1Q04048 859 aaPredicted RBP5.11□□□□□ -1.59
NFI1YOR156C ATG26Q06321 1198 aa5.11□□□□□ -1.59
NFI1YOR156C TEN1Q07921 160 aa5.11□□□□□ -1.59
NFI1YOR156C ETT1Q08421 412 aaKnown RBP5.11□□□□□ -1.59
NFI1YOR156C CRC1Q12289 327 aa5.11□□□□□ -1.59
NFI1YOR156C MRP13P12686 339 aa5.11□□□□□ -1.59
NFI1YOR156C IMG1P25626 169 aa5.11□□□□□ -1.59
NFI1YOR156C WBP1P33767 430 aaKnown RBP5.11□□□□□ -1.59
NFI1YOR156C YBL055CP34220 418 aaPredicted RBP5.11□□□□□ -1.59
NFI1YOR156C ERG26P53199 349 aaKnown RBP5.11□□□□□ -1.59
NFI1YOR156C YGR127WP53275 312 aa5.11□□□□□ -1.59
NFI1YOR156C JJJ1P53863 590 aa5.11□□□□□ -1.59
NFI1YOR156C GRC3Q07845 632 aa5.11□□□□□ -1.59
NFI1YOR156C YER190C-BP0CX94 160 aa5.1□□□□□ -1.59
NFI1YOR156C YEL077W-AP0CX95 160 aa5.1□□□□□ -1.59
NFI1YOR156C YGR296C-BP0CX96 160 aa5.1□□□□□ -1.59
NFI1YOR156C YPL283W-BP0CX97 160 aa5.1□□□□□ -1.59
NFI1YOR156C YPR204C-AP0CX98 160 aa5.1□□□□□ -1.59
NFI1YOR156C RED1P14291 827 aa5.1□□□□□ -1.59
NFI1YOR156C MET18P40469 1032 aa5.1□□□□□ -1.59
NFI1YOR156C IMD4P50094 524 aaKnown RBP5.1□□□□□ -1.59
NFI1YOR156C EMI2Q04409 500 aaKnown RBP5.1□□□□□ -1.59
NFI1YOR156C ECM22Q05958 814 aaPredicted RBP5.1□□□□□ -1.59
NFI1YOR156C RLM1Q12224 676 aa5.1□□□□□ -1.59
NFI1YOR156C SGS1P35187 1447 aa5.1□□□□□ -1.59
NFI1YOR156C YPT1P01123 206 aaKnown RBP5.09□□□□□ -1.59
NFI1YOR156C GAL80P04387 435 aa5.09□□□□□ -1.59
NFI1YOR156C SEF1P34228 1148 aa5.09□□□□□ -1.59
NFI1YOR156C RKM3P38222 552 aa5.09□□□□□ -1.59
NFI1YOR156C DOT5P40553 215 aa5.09□□□□□ -1.59
NFI1YOR156C VTC2P43585 828 aa5.09□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 21.8 ms