RNA–Protein interactions for RNA: YOL038W

PRE6, Transcript of Alpha 4 subunit of the 20S proteasome, yeastyeast

Gene PRE6, Length 765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE6YOL038W PEP5P12868 1029 aa10.46□□□□□ -0.73
PRE6YOL038W PDC5P16467 563 aaKnown RBP10.46□□□□□ -0.73
PRE6YOL038W HRR25P29295 494 aaKnown RBP10.46□□□□□ -0.73
PRE6YOL038W ATP11P32453 318 aa10.46□□□□□ -0.73
PRE6YOL038W TIP20P33891 701 aa10.46□□□□□ -0.73
PRE6YOL038W MAK5P38112 773 aaPredicted RBP10.46□□□□□ -0.73
PRE6YOL038W YHR020WP38708 688 aaKnown RBP10.46□□□□□ -0.73
PRE6YOL038W PLB1P39105 664 aa10.46□□□□□ -0.73
PRE6YOL038W YDR109CQ04585 715 aa10.46□□□□□ -0.73
PRE6YOL038W RMP1Q12530 201 aa10.46□□□□□ -0.73
PRE6YOL038W RPB2P08518 1224 aaKnown RBP10.45□□□□□ -0.74
PRE6YOL038W HSP60P19882 572 aaKnown RBP10.45□□□□□ -0.74
PRE6YOL038W PEX5P35056 612 aa10.45□□□□□ -0.74
PRE6YOL038W RRP1P35178 278 aaPredicted RBP10.45□□□□□ -0.74
PRE6YOL038W TOM20P35180 183 aa10.45□□□□□ -0.74
PRE6YOL038W DEF1P35732 738 aaKnown RBP10.45□□□□□ -0.74
PRE6YOL038W YHL008CP38750 627 aa10.45□□□□□ -0.74
PRE6YOL038W MAD1P40957 749 aa10.45□□□□□ -0.74
PRE6YOL038W PFA3P42836 336 aa10.45□□□□□ -0.74
PRE6YOL038W ADE13Q05911 482 aaKnown RBP10.45□□□□□ -0.74
PRE6YOL038W SYT1Q06836 1226 aa10.45□□□□□ -0.74
PRE6YOL038W GUP2Q08929 609 aa10.45□□□□□ -0.74
PRE6YOL038W PST1Q12355 444 aa10.45□□□□□ -0.74
PRE6YOL038W RRP12Q12754 1228 aaKnown RBP10.45□□□□□ -0.74
PRE6YOL038W PRP16P15938 1071 aaPredicted RBP10.44□□□□□ -0.74
PRE6YOL038W HEM15P16622 393 aa10.44□□□□□ -0.74
PRE6YOL038W MSH1P25846 959 aa10.44□□□□□ -0.74
PRE6YOL038W FMP46P36141 133 aaKnown RBP10.44□□□□□ -0.74
PRE6YOL038W SOL2P37262 315 aa10.44□□□□□ -0.74
PRE6YOL038W UBS1P38290 277 aa10.44□□□□□ -0.74
PRE6YOL038W HSE1P38753 452 aa10.44□□□□□ -0.74
PRE6YOL038W UTP18P40362 594 aaPredicted RBP10.44□□□□□ -0.74
PRE6YOL038W ALA1P40825 983 aaKnown RBP10.44□□□□□ -0.74
PRE6YOL038W SAE2P46946 345 aa10.44□□□□□ -0.74
PRE6YOL038W TIS11P47977 285 aa10.44□□□□□ -0.74
PRE6YOL038W RIM21P48565 533 aa10.44□□□□□ -0.74
PRE6YOL038W RPL22BP56628 122 aaKnown RBP10.44□□□□□ -0.74
PRE6YOL038W VHS1Q03785 461 aa10.44□□□□□ -0.74
PRE6YOL038W SSL1Q04673 461 aaPredicted RBP10.44□□□□□ -0.74
PRE6YOL038W CDC123Q05791 360 aa10.44□□□□□ -0.74
PRE6YOL038W MPC54Q08550 464 aa10.44□□□□□ -0.74
PRE6YOL038W YOR012WQ12351 137 aa10.44□□□□□ -0.74
PRE6YOL038W ICT1Q12385 394 aa10.44□□□□□ -0.74
PRE6YOL038W YAR066WP0CX18 203 aa10.43□□□□□ -0.74
PRE6YOL038W YHR214WP0CX19 203 aa10.43□□□□□ -0.74
PRE6YOL038W MF(ALPHA)2P32435 120 aa10.43□□□□□ -0.74
PRE6YOL038W MGM101P32787 269 aaKnown RBP10.43□□□□□ -0.74
PRE6YOL038W RPF2P36160 344 aaKnown RBP10.43□□□□□ -0.74
PRE6YOL038W MNN1P39106 762 aa10.43□□□□□ -0.74
PRE6YOL038W GIM4P40005 111 aaKnown RBP10.43□□□□□ -0.74
PRE6YOL038W TRS23Q03784 219 aa10.43□□□□□ -0.74
PRE6YOL038W YOR389WQ08912 624 aa10.43□□□□□ -0.74
PRE6YOL038W YPL278CQ08990 100 aa10.43□□□□□ -0.74
PRE6YOL038W FRE7Q12333 620 aa10.43□□□□□ -0.74
PRE6YOL038W FAS1P07149 2051 aaKnown RBP10.43□□□□□ -0.74
PRE6YOL038W DOM34P33309 386 aa10.42□□□□□ -0.74
PRE6YOL038W EMC3P36039 253 aa10.42□□□□□ -0.74
PRE6YOL038W REI1P38344 393 aaPredicted RBP10.42□□□□□ -0.74
PRE6YOL038W YHR033WP38690 423 aa10.42□□□□□ -0.74
PRE6YOL038W CCT4P39078 528 aaKnown RBP10.42□□□□□ -0.74
PRE6YOL038W PET130P47065 347 aa10.42□□□□□ -0.74
PRE6YOL038W GCV1P48015 400 aa10.42□□□□□ -0.74
PRE6YOL038W BUD32P53323 261 aa10.42□□□□□ -0.74
PRE6YOL038W COG6P53959 839 aa10.42□□□□□ -0.74
PRE6YOL038W ADE12P80210 433 aaKnown RBP10.42□□□□□ -0.74
PRE6YOL038W SPP2Q02521 185 aa10.42□□□□□ -0.74
PRE6YOL038W DIC1Q06143 298 aa10.42□□□□□ -0.74
PRE6YOL038W SEC39Q12745 709 aa10.42□□□□□ -0.74
PRE6YOL038W HSH49Q99181 213 aaPredicted RBP10.42□□□□□ -0.74
PRE6YOL038W SPO16P17122 198 aa10.41□□□□□ -0.74
PRE6YOL038W MEI5P32489 222 aa10.41□□□□□ -0.74
PRE6YOL038W PET309P32522 965 aaPredicted RBP10.41□□□□□ -0.74
PRE6YOL038W NTR2P36118 322 aaPredicted RBP10.41□□□□□ -0.74
PRE6YOL038W TRM7P38238 310 aaKnown RBP10.41□□□□□ -0.74
PRE6YOL038W MPT5P39016 859 aaKnown RBP RIP-Chip data10.41□□□□□ -0.74not detected
PRE6YOL038W ARH1P48360 493 aa10.41□□□□□ -0.74
PRE6YOL038W FHN1P53279 174 aa10.41□□□□□ -0.74
PRE6YOL038W HST2P53686 357 aa10.41□□□□□ -0.74
PRE6YOL038W GLE1Q12315 538 aa10.41□□□□□ -0.74
PRE6YOL038W YLR111WQ12528 110 aa10.41□□□□□ -0.74
PRE6YOL038W SEM1O94742 89 aa10.4□□□□□ -0.74
PRE6YOL038W CDC21P06785 304 aa10.4□□□□□ -0.74
PRE6YOL038W SEC53P07283 254 aaKnown RBP10.4□□□□□ -0.74
PRE6YOL038W HOP1P20050 605 aa10.4□□□□□ -0.74
PRE6YOL038W CLN2P20438 545 aa10.4□□□□□ -0.74
PRE6YOL038W AMS1P22855 1083 aa10.4□□□□□ -0.74
PRE6YOL038W SEC14P24280 304 aaKnown RBP10.4□□□□□ -0.74
PRE6YOL038W SQT1P35184 431 aa10.4□□□□□ -0.74
PRE6YOL038W ALR2P43553 858 aa10.4□□□□□ -0.74
PRE6YOL038W STB2P46679 850 aa10.4□□□□□ -0.74
PRE6YOL038W NNF1P47149 201 aa10.4□□□□□ -0.74
PRE6YOL038W CSL4P53859 292 aaPredicted RBP10.4□□□□□ -0.74
PRE6YOL038W VPS60Q03390 229 aa10.4□□□□□ -0.74
PRE6YOL038W RSC2Q06488 889 aa10.4□□□□□ -0.74
PRE6YOL038W GRS2Q06817 618 aa10.4□□□□□ -0.74
PRE6YOL038W CMR1Q12510 522 aaKnown RBP10.4□□□□□ -0.74
PRE6YOL038W YMR030W-AQ3E760 96 aa10.4□□□□□ -0.74
PRE6YOL038W BEM3P32873 1128 aa10.39□□□□□ -0.75
PRE6YOL038W ERG26P53199 349 aaKnown RBP10.39□□□□□ -0.75
PRE6YOL038W YMR027WQ04371 470 aa10.39□□□□□ -0.75
Retrieved 100 of 5,963 RNA–protein pairs in 29 ms