RNA–Protein interactions for RNA: YNL022C

RCM1, Transcript of rRNA m5C methyltransferase, yeast

Gene RCM1, Length 1,473 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RCM1	YNL022C	YIL161W	P40449	235 aa	Known RBP	4.55	□□□□□ -1.68
RCM1	YNL022C	MRX6	P48564	524 aa		4.55	□□□□□ -1.68
RCM1	YNL022C	YDL183C	P48569	320 aa		4.55	□□□□□ -1.68
RCM1	YNL022C	ASE1	P50275	885 aa		4.55	□□□□□ -1.68
RCM1	YNL022C	VPS4	P52917	437 aa		4.55	□□□□□ -1.68
RCM1	YNL022C	YPL191C	Q08930	360 aa		4.55	□□□□□ -1.68
RCM1	YNL022C	TRM13	Q12383	476 aa		4.55	□□□□□ -1.68
RCM1	YNL022C	QCR6	P00127	147 aa		4.54	□□□□□ -1.68
RCM1	YNL022C	VPS33	P20795	691 aa		4.54	□□□□□ -1.68
RCM1	YNL022C	YCR015C	P25616	317 aa		4.54	□□□□□ -1.68
RCM1	YNL022C	PRE2	P30656	287 aa	Known RBP	4.54	□□□□□ -1.68
RCM1	YNL022C	ERG3	P32353	365 aa		4.54	□□□□□ -1.68
RCM1	YNL022C	YKT6	P36015	200 aa	Known RBP	4.54	□□□□□ -1.68
RCM1	YNL022C	MIC60	P36112	540 aa		4.54	□□□□□ -1.68
RCM1	YNL022C	FLC2	P39719	783 aa		4.54	□□□□□ -1.68
RCM1	YNL022C	TMN3	P40071	706 aa		4.54	□□□□□ -1.68
RCM1	YNL022C	PFK26	P40433	827 aa	Known RBP	4.54	□□□□□ -1.68
RCM1	YNL022C	MSE1	P48525	536 aa		4.54	□□□□□ -1.68
RCM1	YNL022C	FHN1	P53279	174 aa		4.54	□□□□□ -1.68
RCM1	YNL022C	CSL4	P53859	292 aa	Predicted RBP	4.54	□□□□□ -1.68
RCM1	YNL022C	TIM44	Q01852	431 aa		4.54	□□□□□ -1.68
RCM1	YNL022C	TRM44	Q02648	567 aa	Known RBP	4.54	□□□□□ -1.68
RCM1	YNL022C	HOF1	Q05080	669 aa		4.54	□□□□□ -1.68
RCM1	YNL022C	YPR172W	Q06608	200 aa		4.54	□□□□□ -1.68
RCM1	YNL022C	VAM6	Q07468	1049 aa		4.54	□□□□□ -1.68
RCM1	YNL022C	TMA16	Q08687	178 aa		4.54	□□□□□ -1.68
RCM1	YNL022C	PGC1	Q08959	321 aa		4.54	□□□□□ -1.68
RCM1	YNL022C	PCL8	Q08966	492 aa		4.54	□□□□□ -1.68
RCM1	YNL022C	RPB2	P08518	1224 aa	Known RBP	4.53	□□□□□ -1.68
RCM1	YNL022C	GLK1	P17709	500 aa	Known RBP	4.53	□□□□□ -1.68
RCM1	YNL022C	SAM2	P19358	384 aa	Known RBP	4.53	□□□□□ -1.68
RCM1	YNL022C	ERG8	P24521	451 aa		4.53	□□□□□ -1.68
RCM1	YNL022C	GSY2	P27472	705 aa		4.53	□□□□□ -1.68
RCM1	YNL022C	DSS4	P32601	143 aa		4.53	□□□□□ -1.68
RCM1	YNL022C	PHO11	P35842	467 aa		4.53	□□□□□ -1.68
RCM1	YNL022C	ALY1	P36117	915 aa		4.53	□□□□□ -1.68
RCM1	YNL022C	REG2	P38232	338 aa		4.53	□□□□□ -1.68
RCM1	YNL022C	PHO12	P38693	467 aa		4.53	□□□□□ -1.68
RCM1	YNL022C	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.53	□□□□□ -1.68	not detected
RCM1	YNL022C	TIF4631	P39935	952 aa	Known RBP	4.53	□□□□□ -1.68
RCM1	YNL022C	YJL068C	P40363	299 aa		4.53	□□□□□ -1.68
RCM1	YNL022C	SAE2	P46946	345 aa		4.53	□□□□□ -1.68
RCM1	YNL022C	YGL138C	P53122	345 aa		4.53	□□□□□ -1.68
RCM1	YNL022C	CUE3	P53137	624 aa	Known RBP	4.53	□□□□□ -1.68
RCM1	YNL022C	OGG1	P53397	376 aa	Predicted RBP	4.53	□□□□□ -1.68
RCM1	YNL022C	YMR111C	Q04461	462 aa	Predicted RBP	4.53	□□□□□ -1.68
RCM1	YNL022C	CRF1	Q04930	467 aa		4.53	□□□□□ -1.68
RCM1	YNL022C	SKG3	Q06315	1026 aa		4.53	□□□□□ -1.68
RCM1	YNL022C	DSE3	Q08729	430 aa		4.53	□□□□□ -1.68
RCM1	YNL022C	CBS1	P14066	229 aa		4.52	□□□□□ -1.69
RCM1	YNL022C	PMS1	P14242	873 aa		4.52	□□□□□ -1.69
RCM1	YNL022C	RAD51	P25454	400 aa		4.52	□□□□□ -1.69
RCM1	YNL022C	CTP1	P38152	299 aa		4.52	□□□□□ -1.69
RCM1	YNL022C	YBL028C	P38202	106 aa		4.52	□□□□□ -1.69
RCM1	YNL022C	TDP1	P38319	544 aa		4.52	□□□□□ -1.69
RCM1	YNL022C	TOM71	P38825	639 aa	Known RBP	4.52	□□□□□ -1.69
RCM1	YNL022C	KEL1	P38853	1164 aa	Known RBP	4.52	□□□□□ -1.69
RCM1	YNL022C	LNP1	P38878	278 aa		4.52	□□□□□ -1.69
RCM1	YNL022C	PSD1	P39006	500 aa		4.52	□□□□□ -1.69
RCM1	YNL022C	ARB1	P40024	610 aa	Known RBP	4.52	□□□□□ -1.69
RCM1	YNL022C	LSM5	P40089	93 aa	Known RBP	4.52	□□□□□ -1.69
RCM1	YNL022C	YIL166C	P40445	542 aa		4.52	□□□□□ -1.69
RCM1	YNL022C	MPS3	P47069	682 aa		4.52	□□□□□ -1.69
RCM1	YNL022C	RFX1	P48743	811 aa		4.52	□□□□□ -1.69
RCM1	YNL022C	MTG1	Q03151	367 aa	Predicted RBP	4.52	□□□□□ -1.69
RCM1	YNL022C	SMD2	Q06217	110 aa	Known RBP	4.52	□□□□□ -1.69
RCM1	YNL022C	NMD4	Q12129	218 aa		4.52	□□□□□ -1.69
RCM1	YNL022C	NBL1	Q3E7Y6	73 aa		4.52	□□□□□ -1.69
RCM1	YNL022C	PNO1	Q99216	274 aa	Known RBP	4.52	□□□□□ -1.69
RCM1	YNL022C	TUS1	Q06412	1307 aa		4.52	□□□□□ -1.69
RCM1	YNL022C	HPR1	P17629	752 aa	Known RBP	4.51	□□□□□ -1.69
RCM1	YNL022C	TRX1	P22217	103 aa	Known RBP	4.51	□□□□□ -1.69
RCM1	YNL022C	BMH1	P29311	267 aa	Known RBP	4.51	□□□□□ -1.69
RCM1	YNL022C	CST26	P38226	397 aa		4.51	□□□□□ -1.69
RCM1	YNL022C	SSU1	P41930	458 aa		4.51	□□□□□ -1.69
RCM1	YNL022C	AAD10	P47182	288 aa		4.51	□□□□□ -1.69
RCM1	YNL022C	COS12	P53053	380 aa		4.51	□□□□□ -1.69
RCM1	YNL022C	TAM41	P53230	385 aa		4.51	□□□□□ -1.69
RCM1	YNL022C	BNI5	P53890	448 aa	Known RBP	4.51	□□□□□ -1.69
RCM1	YNL022C	TIM11	P81449	96 aa	Predicted RBP	4.51	□□□□□ -1.69
RCM1	YNL022C	CIK1	Q01649	594 aa		4.51	□□□□□ -1.69
RCM1	YNL022C	WAR1	Q03631	944 aa		4.51	□□□□□ -1.69
RCM1	YNL022C	YSH1	Q06224	779 aa	Predicted RBP	4.51	□□□□□ -1.69
RCM1	YNL022C	MMR1	Q06324	491 aa		4.51	□□□□□ -1.69
RCM1	YNL022C	SUE1	Q06524	206 aa		4.51	□□□□□ -1.69
RCM1	YNL022C	APC5	Q08683	685 aa		4.51	□□□□□ -1.69
RCM1	YNL022C	CIR2	Q08822	631 aa		4.51	□□□□□ -1.69
RCM1	YNL022C	TCO89	Q08921	799 aa		4.51	□□□□□ -1.69
RCM1	YNL022C	ACF2	Q12168	779 aa		4.51	□□□□□ -1.69
RCM1	YNL022C	FKS1	P38631	1876 aa	Known RBP	4.51	□□□□□ -1.69
RCM1	YNL022C	CBP1	P07252	654 aa		4.5	□□□□□ -1.69
RCM1	YNL022C	ALG1	P16661	449 aa		4.5	□□□□□ -1.69
RCM1	YNL022C	THR1	P17423	357 aa	Known RBP	4.5	□□□□□ -1.69
RCM1	YNL022C	PWP1	P21304	576 aa	Known RBP	4.5	□□□□□ -1.69
RCM1	YNL022C	VPS34	P22543	875 aa		4.5	□□□□□ -1.69
RCM1	YNL022C	MNE1	P24720	663 aa		4.5	□□□□□ -1.69
RCM1	YNL022C	CDC15	P27636	974 aa		4.5	□□□□□ -1.69
RCM1	YNL022C	PPS1	P38148	807 aa		4.5	□□□□□ -1.69
RCM1	YNL022C	AFG3	P39925	761 aa		4.5	□□□□□ -1.69
RCM1	YNL022C	FMP10	P40098	244 aa		4.5	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 18.8 ms