RNA–Protein interactions for RNA: YML103C

NUP188, Transcript of Subunit of the inner ring of the nuclear pore complex (NPC), yeastyeast

Gene NUP188, Length 4,968 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP188YML103C LRP1P38801 184 aaKnown RBP1.34□□□□□ -2.2
NUP188YML103C YHR097CP38809 366 aaKnown RBP1.34□□□□□ -2.2
NUP188YML103C SPC97P38863 823 aa1.34□□□□□ -2.2
NUP188YML103C CAJ1P39101 391 aa1.34□□□□□ -2.2
NUP188YML103C AFG3P39925 761 aa1.34□□□□□ -2.2
NUP188YML103C SEC24P40482 926 aaKnown RBP1.34□□□□□ -2.2
NUP188YML103C BPL1P48445 690 aaPredicted RBP1.34□□□□□ -2.2
NUP188YML103C VPS73P53142 486 aaKnown RBP1.34□□□□□ -2.2
NUP188YML103C YNL092WP53934 400 aa1.34□□□□□ -2.2
NUP188YML103C ENT4Q07872 247 aa1.34□□□□□ -2.2
NUP188YML103C GRX6Q12438 231 aa1.34□□□□□ -2.2
NUP188YML103C PCD1Q12524 340 aa1.34□□□□□ -2.2
NUP188YML103C YPT6Q99260 215 aa1.34□□□□□ -2.2
NUP188YML103C COX1P00401 534 aa1.33□□□□□ -2.2
NUP188YML103C CPR2P23285 205 aa1.33□□□□□ -2.2
NUP188YML103C RNQ1P25367 405 aa1.33□□□□□ -2.2
NUP188YML103C YPT10P38146 199 aa1.33□□□□□ -2.2
NUP188YML103C RIX1P38883 763 aaPredicted RBP1.33□□□□□ -2.2
NUP188YML103C YTA12P40341 825 aa1.33□□□□□ -2.2
NUP188YML103C RMD9P53140 646 aaKnown RBP1.33□□□□□ -2.2
NUP188YML103C CUL3P53202 744 aa1.33□□□□□ -2.2
NUP188YML103C ARP10Q04549 284 aa1.33□□□□□ -2.2
NUP188YML103C TMN2Q04562 672 aa1.33□□□□□ -2.2
NUP188YML103C MCP2Q06567 569 aa1.33□□□□□ -2.2
NUP188YML103C LUC7Q07508 261 aaPredicted RBP1.33□□□□□ -2.2
NUP188YML103C BUG1Q12191 341 aa1.33□□□□□ -2.2
NUP188YML103C AI5_ALPHAQ9ZZX1 630 aa1.33□□□□□ -2.2
NUP188YML103C RAP1P11938 827 aa1.33□□□□□ -2.2
NUP188YML103C PDA1P16387 420 aaKnown RBP1.33□□□□□ -2.2
NUP188YML103C SRP54P20424 541 aaKnown RBP1.33□□□□□ -2.2
NUP188YML103C YJU2P28320 278 aaPredicted RBP1.33□□□□□ -2.2
NUP188YML103C SAS3P34218 831 aa1.33□□□□□ -2.2
NUP188YML103C SHP1P34223 423 aa1.33□□□□□ -2.2
NUP188YML103C FTH1P38310 465 aa1.33□□□□□ -2.2
NUP188YML103C GDI1P39958 451 aaKnown RBP1.33□□□□□ -2.2
NUP188YML103C MIT1P40002 666 aa1.33□□□□□ -2.2
NUP188YML103C BUR6P40096 142 aa1.33□□□□□ -2.2
NUP188YML103C QRI1P43123 477 aaKnown RBP1.33□□□□□ -2.2
NUP188YML103C SNO3P43544 222 aa1.33□□□□□ -2.2
NUP188YML103C IRC8P47046 822 aa1.33□□□□□ -2.2
NUP188YML103C PET130P47065 347 aa1.33□□□□□ -2.2
NUP188YML103C TAM41P53230 385 aa1.33□□□□□ -2.2
NUP188YML103C MDG1P53885 366 aa1.33□□□□□ -2.2
NUP188YML103C GET3Q12154 354 aaKnown RBP1.33□□□□□ -2.2
NUP188YML103C ARP6Q12509 438 aa1.33□□□□□ -2.2
NUP188YML103C NBL1Q3E7Y6 73 aa1.33□□□□□ -2.2
NUP188YML103C CLB2P24869 491 aa1.33□□□□□ -2.2
NUP188YML103C SPB1P25582 841 aaPredicted RBP1.33□□□□□ -2.2
NUP188YML103C KRR1P25586 316 aaPredicted RBP1.33□□□□□ -2.2
NUP188YML103C IMG1P25626 169 aa1.33□□□□□ -2.2
NUP188YML103C ADK2P26364 225 aa1.33□□□□□ -2.2
NUP188YML103C GDA1P32621 518 aa1.33□□□□□ -2.2
NUP188YML103C ANP1P32629 500 aa1.33□□□□□ -2.2
NUP188YML103C OCT1P35999 772 aa1.33□□□□□ -2.2
NUP188YML103C RFC1P38630 861 aaKnown RBP1.33□□□□□ -2.2
NUP188YML103C LAG1P38703 411 aa1.33□□□□□ -2.2
NUP188YML103C ARN1P38731 627 aa1.33□□□□□ -2.2
NUP188YML103C ARO9P38840 513 aaPredicted RBP1.33□□□□□ -2.2
NUP188YML103C SAP1P39955 897 aaKnown RBP1.33□□□□□ -2.2
NUP188YML103C NPA3P47122 385 aa1.33□□□□□ -2.2
NUP188YML103C PHO23P50947 330 aa1.33□□□□□ -2.2
NUP188YML103C YNR061CP53747 219 aa1.33□□□□□ -2.2
NUP188YML103C UBP16Q02863 499 aa1.33□□□□□ -2.2
NUP188YML103C CTL1Q03220 320 aaKnown RBP1.33□□□□□ -2.2
NUP188YML103C RAD33Q04231 177 aa1.33□□□□□ -2.2
NUP188YML103C MCH4Q08268 501 aa1.33□□□□□ -2.2
NUP188YML103C YPL272CQ08984 517 aa1.33□□□□□ -2.2
NUP188YML103C YOR019WQ99248 730 aa1.33□□□□□ -2.2
NUP188YML103C STE50P25344 346 aa1.32□□□□□ -2.2
NUP188YML103C SNC1P31109 117 aa1.32□□□□□ -2.2
NUP188YML103C YBL055CP34220 418 aaPredicted RBP1.32□□□□□ -2.2
NUP188YML103C APE3P37302 537 aaKnown RBP1.32□□□□□ -2.2
NUP188YML103C MOH1P38191 138 aa1.32□□□□□ -2.2
NUP188YML103C LSM5P40089 93 aaKnown RBP1.32□□□□□ -2.2
NUP188YML103C IAH1P41734 238 aa1.32□□□□□ -2.2
NUP188YML103C CCT7P42943 550 aaKnown RBP1.32□□□□□ -2.2
NUP188YML103C YFL015CP43578 164 aa1.32□□□□□ -2.2
NUP188YML103C ASN1P49089 572 aaKnown RBP1.32□□□□□ -2.2
NUP188YML103C YGR126WP53274 230 aa1.32□□□□□ -2.2
NUP188YML103C NCS2P53923 493 aaPredicted RBP1.32□□□□□ -2.2
NUP188YML103C KIN4Q01919 800 aa1.32□□□□□ -2.2
NUP188YML103C YPL071CQ02864 156 aa1.32□□□□□ -2.2
NUP188YML103C HRD3Q05787 833 aa1.32□□□□□ -2.2
NUP188YML103C YLR455WQ06188 304 aa1.32□□□□□ -2.2
NUP188YML103C FRE3Q08905 711 aa1.32□□□□□ -2.2
NUP188YML103C PUF2Q12221 1075 aaKnown RBP RIP-Chip data1.32□□□□□ -2.2not detected
NUP188YML103C SKS1Q12505 502 aa1.32□□□□□ -2.2
NUP188YML103C YDL007C-AQ2V2Q0 85 aa1.32□□□□□ -2.2
NUP188YML103C RPL6BP05739 176 aaKnown RBP1.32□□□□□ -2.2
NUP188YML103C ARD1P07347 238 aaPredicted RBP1.32□□□□□ -2.2
NUP188YML103C VMA2P16140 517 aaKnown RBP1.32□□□□□ -2.2
NUP188YML103C AMD2P22580 549 aa1.32□□□□□ -2.2
NUP188YML103C RFA2P26754 273 aaKnown RBP1.32□□□□□ -2.2
NUP188YML103C CRM1P30822 1084 aaKnown RBP1.32□□□□□ -2.2
NUP188YML103C TFB1P32776 642 aa1.32□□□□□ -2.2
NUP188YML103C NUP133P36161 1157 aa1.32□□□□□ -2.2
NUP188YML103C ADE17P38009 592 aaKnown RBP1.32□□□□□ -2.2
NUP188YML103C YBL028CP38202 106 aa1.32□□□□□ -2.2
NUP188YML103C YER130CP39959 443 aa1.32□□□□□ -2.2
NUP188YML103C YJL043WP47053 257 aa1.32□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 37.1 ms