RNA–Protein interactions for RNA: YLR397C

AFG2, Transcript of ATPase of the CDC48/PAS1/SEC18 (AAA) family, forms a hexameric complex, yeastyeast

Gene AFG2, Length 2,343 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AFG2YLR397C TDA5Q06417 326 aaKnown RBP7.3□□□□□ -1.24
AFG2YLR397C CDC73Q06697 393 aa7.3□□□□□ -1.24
AFG2YLR397C LUC7Q07508 261 aaPredicted RBP7.3□□□□□ -1.24
AFG2YLR397C CYK3Q07533 885 aa7.3□□□□□ -1.24
AFG2YLR397C FRE5Q08908 694 aa7.3□□□□□ -1.24
AFG2YLR397C TIF1P10081 395 aaKnown RBP7.29□□□□□ -1.24
AFG2YLR397C CHS2P14180 963 aa7.29□□□□□ -1.24
AFG2YLR397C EXO70P19658 623 aa7.29□□□□□ -1.24
AFG2YLR397C AMS1P22855 1083 aa7.29□□□□□ -1.24
AFG2YLR397C BCH2P36122 765 aa7.29□□□□□ -1.24
AFG2YLR397C KAE1P36132 386 aa7.29□□□□□ -1.24
AFG2YLR397C MRPL37P36532 105 aa7.29□□□□□ -1.24
AFG2YLR397C YBL036CP38197 257 aa7.29□□□□□ -1.24
AFG2YLR397C VPS29P38759 282 aa7.29□□□□□ -1.24
AFG2YLR397C SEC31P38968 1273 aaKnown RBP7.29□□□□□ -1.24
AFG2YLR397C ROK1P45818 564 aaPredicted RBP7.29□□□□□ -1.24
AFG2YLR397C PRP24P49960 444 aaKnown RBP7.29□□□□□ -1.24
AFG2YLR397C YGL036WP53185 909 aaPredicted RBP7.29□□□□□ -1.24
AFG2YLR397C YMR187CQ03236 431 aa7.29□□□□□ -1.24
AFG2YLR397C YMR226CQ05016 267 aaKnown RBP7.29□□□□□ -1.24
AFG2YLR397C YDL086WQ07505 273 aa7.29□□□□□ -1.24
AFG2YLR397C YNG1Q08465 219 aa7.29□□□□□ -1.24
AFG2YLR397C SNX3Q08826 162 aaKnown RBP7.29□□□□□ -1.24
AFG2YLR397C HER1Q12276 1246 aa7.29□□□□□ -1.24
AFG2YLR397C DCN1Q12395 269 aa7.29□□□□□ -1.24
AFG2YLR397C ATP2P00830 511 aaKnown RBP7.29□□□□□ -1.24
AFG2YLR397C BI2P03873 423 aa7.29□□□□□ -1.24
AFG2YLR397C ADE8P04161 214 aa7.29□□□□□ -1.24
AFG2YLR397C HIS5P07172 385 aa7.29□□□□□ -1.24
AFG2YLR397C RPS18AP0CX55 146 aaKnown RBP7.29□□□□□ -1.24
AFG2YLR397C RPS18BP0CX56 146 aaPredicted RBP7.29□□□□□ -1.24
AFG2YLR397C SEC18P18759 758 aaKnown RBP7.29□□□□□ -1.24
AFG2YLR397C ATP12P22135 325 aa7.29□□□□□ -1.24
AFG2YLR397C CYS4P32582 507 aaKnown RBP7.29□□□□□ -1.24
AFG2YLR397C YPT52P36018 234 aaKnown RBP7.29□□□□□ -1.24
AFG2YLR397C ELF1P36053 145 aa7.29□□□□□ -1.24
AFG2YLR397C CCL1P37366 393 aa7.29□□□□□ -1.24
AFG2YLR397C YBL086CP38177 466 aa7.29□□□□□ -1.24
AFG2YLR397C GTT1P40582 234 aa7.29□□□□□ -1.24
AFG2YLR397C BIO3P50277 480 aa7.29□□□□□ -1.24
AFG2YLR397C YGR125WP53273 1036 aa7.29□□□□□ -1.24
AFG2YLR397C VPS62P53285 467 aa7.29□□□□□ -1.24
AFG2YLR397C ARP4P80428 489 aa7.29□□□□□ -1.24
AFG2YLR397C FAR10Q06001 478 aa7.29□□□□□ -1.24
AFG2YLR397C UBR1P19812 1950 aa7.29□□□□□ -1.24
AFG2YLR397C RPL22AP05749 121 aaKnown RBP7.28□□□□□ -1.24
AFG2YLR397C MAS1P10507 462 aa7.28□□□□□ -1.24
AFG2YLR397C TOP3P13099 656 aa7.28□□□□□ -1.24
AFG2YLR397C HEM12P32347 362 aaPredicted RBP7.28□□□□□ -1.24
AFG2YLR397C SIF2P38262 535 aa7.28□□□□□ -1.24
AFG2YLR397C POP4P38336 279 aa7.28□□□□□ -1.24
AFG2YLR397C UBX7P38349 436 aa7.28□□□□□ -1.24
AFG2YLR397C EMP47P43555 445 aa7.28□□□□□ -1.24
AFG2YLR397C ACF4P47129 309 aa7.28□□□□□ -1.24
AFG2YLR397C TWF1P53250 332 aa7.28□□□□□ -1.24
AFG2YLR397C RSM27P53305 110 aa7.28□□□□□ -1.24
AFG2YLR397C HOL1P53389 586 aa7.28□□□□□ -1.24
AFG2YLR397C CDA2Q06703 312 aa7.28□□□□□ -1.24
AFG2YLR397C CUE5Q08412 411 aaKnown RBP7.28□□□□□ -1.24
AFG2YLR397C PSF3Q12146 194 aa7.28□□□□□ -1.24
AFG2YLR397C TDH1P00360 332 aaKnown RBP7.28□□□□□ -1.24
AFG2YLR397C GCN4P03069 281 aa7.28□□□□□ -1.24
AFG2YLR397C ATP4P05626 244 aa7.28□□□□□ -1.24
AFG2YLR397C ECM25P32525 599 aa7.28□□□□□ -1.24
AFG2YLR397C YER010CP40011 234 aa7.28□□□□□ -1.24
AFG2YLR397C RGI1P40043 161 aaPredicted RBP7.28□□□□□ -1.24
AFG2YLR397C YMR147WP40218 223 aaKnown RBP7.28□□□□□ -1.24
AFG2YLR397C TGL3P40308 642 aa7.28□□□□□ -1.24
AFG2YLR397C YGR111WP53265 400 aa7.28□□□□□ -1.24
AFG2YLR397C TEP1P53916 434 aa7.28□□□□□ -1.24
AFG2YLR397C SPC2Q04969 178 aa7.28□□□□□ -1.24
AFG2YLR397C PUF3Q07807 879 aaKnown RBP RIP-Chip data7.28□□□□□ -1.24not detected
AFG2YLR397C YLR053CQ12026 108 aa7.28□□□□□ -1.24
AFG2YLR397C TMA7Q3E764 64 aaKnown RBP7.28□□□□□ -1.24
AFG2YLR397C YHR213W-AQ8TGT4 77 aa7.28□□□□□ -1.24
AFG2YLR397C TUB3P09734 445 aaKnown RBP7.27□□□□□ -1.25
AFG2YLR397C RPS24AP0CX31 135 aaKnown RBP7.27□□□□□ -1.25
AFG2YLR397C RPS24BP0CX32 135 aaKnown RBP7.27□□□□□ -1.25
AFG2YLR397C RPF2P36160 344 aaKnown RBP7.27□□□□□ -1.25
AFG2YLR397C SCO2P38072 301 aa7.27□□□□□ -1.25
AFG2YLR397C VHC1P38329 1120 aa7.27□□□□□ -1.25
AFG2YLR397C YKE4P40544 346 aa7.27□□□□□ -1.25
AFG2YLR397C AIM14P53109 570 aa7.27□□□□□ -1.25
AFG2YLR397C GIM3P53900 129 aa7.27□□□□□ -1.25
AFG2YLR397C YML037CQ03703 340 aa7.27□□□□□ -1.25
AFG2YLR397C SAM4Q08985 325 aaKnown RBP7.27□□□□□ -1.25
AFG2YLR397C SAS5Q99314 248 aa7.27□□□□□ -1.25
AFG2YLR397C BI4P03879 638 aa7.27□□□□□ -1.25
AFG2YLR397C PAB1P04147 577 aaKnown RBP RIP-Chip data7.27□□□□□ -1.25not detected
AFG2YLR397C HEM15P16622 393 aa7.27□□□□□ -1.25
AFG2YLR397C PTC6P25646 442 aa7.27□□□□□ -1.25
AFG2YLR397C RRN6P32786 894 aa7.27□□□□□ -1.25
AFG2YLR397C QNS1P38795 714 aaKnown RBP7.27□□□□□ -1.25
AFG2YLR397C SPF1P39986 1215 aaKnown RBP7.27□□□□□ -1.25
AFG2YLR397C COX16P47081 118 aa7.27□□□□□ -1.25
AFG2YLR397C SPC98P53540 846 aa7.27□□□□□ -1.25
AFG2YLR397C NRD1P53617 575 aaKnown RBP RIP-Chip data7.27□□□□□ -1.25 RIP-Chip
AFG2YLR397C ERV25P54837 211 aaKnown RBP7.27□□□□□ -1.25
AFG2YLR397C LAP3Q01532 483 aaKnown RBP RIP-Chip data7.27□□□□□ -1.25not detected
AFG2YLR397C YPL068CQ02749 293 aa7.27□□□□□ -1.25
Retrieved 100 of 5,963 RNA–protein pairs in 42 ms