RNA–Protein interactions for RNA: YLR240W

VPS34, Transcript of Phosphatidylinositol (PI) 3-kinase that synthesizes PI-3-phosphate, yeastyeast

Gene VPS34, Length 2,628 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS34YLR240W GRX6Q12438 231 aa2.08□□□□□ -2.08
VPS34YLR240W YPR089WO13585 888 aa2.08□□□□□ -2.08
VPS34YLR240W YPT1P01123 206 aaKnown RBP2.08□□□□□ -2.08
VPS34YLR240W SPO16P17122 198 aa2.08□□□□□ -2.08
VPS34YLR240W UBC1P21734 215 aaKnown RBP2.08□□□□□ -2.08
VPS34YLR240W CNA1P23287 553 aa2.08□□□□□ -2.08
VPS34YLR240W YCP4P25349 247 aaKnown RBP2.08□□□□□ -2.08
VPS34YLR240W PEP3P27801 918 aa2.08□□□□□ -2.08
VPS34YLR240W MPE1P35728 441 aaKnown RBP2.08□□□□□ -2.08
VPS34YLR240W OCT1P35999 772 aa2.08□□□□□ -2.08
VPS34YLR240W PSF2P40359 213 aa2.08□□□□□ -2.08
VPS34YLR240W YIL161WP40449 235 aaKnown RBP2.08□□□□□ -2.08
VPS34YLR240W SAP185P40856 1058 aa2.08□□□□□ -2.08
VPS34YLR240W TFG2P41896 400 aaPredicted RBP2.08□□□□□ -2.08
VPS34YLR240W MRPL13Q02204 264 aa2.08□□□□□ -2.08
VPS34YLR240W ERO1Q03103 563 aa2.08□□□□□ -2.08
VPS34YLR240W RRI2Q12348 645 aa2.08□□□□□ -2.08
VPS34YLR240W CEX1Q12453 761 aa2.08□□□□□ -2.08
VPS34YLR240W MYO1P08964 1928 aa2.08□□□□□ -2.08
VPS34YLR240W FKS1P38631 1876 aaKnown RBP2.07□□□□□ -2.08
VPS34YLR240W ATP2P00830 511 aaKnown RBP2.07□□□□□ -2.08
VPS34YLR240W DBF20P32328 564 aa2.07□□□□□ -2.08
VPS34YLR240W RPN12P32496 274 aa2.07□□□□□ -2.08
VPS34YLR240W RPT3P33298 428 aaKnown RBP2.07□□□□□ -2.08
VPS34YLR240W PTH2P34222 208 aa2.07□□□□□ -2.08
VPS34YLR240W BMH2P34730 273 aaKnown RBP2.07□□□□□ -2.08
VPS34YLR240W NUP120P35729 1037 aa2.07□□□□□ -2.08
VPS34YLR240W YKT6P36015 200 aaKnown RBP2.07□□□□□ -2.08
VPS34YLR240W ASG1P40467 964 aa2.07□□□□□ -2.08
VPS34YLR240W IRC8P47046 822 aa2.07□□□□□ -2.08
VPS34YLR240W ZDS2P54786 942 aa2.07□□□□□ -2.08
VPS34YLR240W MRPL1Q04599 285 aa2.07□□□□□ -2.08
VPS34YLR240W CSR1Q06705 408 aaKnown RBP2.07□□□□□ -2.08
VPS34YLR240W CIR2Q08822 631 aa2.07□□□□□ -2.08
VPS34YLR240W RRI1Q12468 440 aa2.07□□□□□ -2.08
VPS34YLR240W TY2A-LR1P0C2J4 438 aa2.07□□□□□ -2.08
VPS34YLR240W TY2A-FP0CX61 438 aa2.07□□□□□ -2.08
VPS34YLR240W TY2A-GR2P0CX62 438 aa2.07□□□□□ -2.08
VPS34YLR240W AIM17P23180 465 aaKnown RBP2.07□□□□□ -2.08
VPS34YLR240W TY2A-CP25383 438 aa2.07□□□□□ -2.08
VPS34YLR240W XRS2P33301 854 aa2.07□□□□□ -2.08
VPS34YLR240W PRX1P34227 261 aaKnown RBP2.07□□□□□ -2.08
VPS34YLR240W RPN11P43588 306 aaKnown RBP2.07□□□□□ -2.08
VPS34YLR240W BNA1P47096 177 aa2.07□□□□□ -2.08
VPS34YLR240W ASE1P50275 885 aa2.07□□□□□ -2.08
VPS34YLR240W DCP2P53550 970 aaKnown RBP2.07□□□□□ -2.08
VPS34YLR240W RTC4P53850 401 aa2.07□□□□□ -2.08
VPS34YLR240W TY2A-DR2Q03483 438 aa2.07□□□□□ -2.08
VPS34YLR240W VPS20Q04272 221 aa2.07□□□□□ -2.08
VPS34YLR240W PIG1Q06216 648 aa2.07□□□□□ -2.08
VPS34YLR240W SWA2Q06677 668 aa2.07□□□□□ -2.08
VPS34YLR240W MCH4Q08268 501 aa2.07□□□□□ -2.08
VPS34YLR240W TY2A-BQ12260 438 aa2.07□□□□□ -2.08
VPS34YLR240W HER1Q12276 1246 aa2.07□□□□□ -2.08
VPS34YLR240W TY2A-OR2Q12293 438 aa2.07□□□□□ -2.08
VPS34YLR240W TY2A-DR1Q12392 438 aa2.07□□□□□ -2.08
VPS34YLR240W TY2A-OR1Q12439 438 aa2.07□□□□□ -2.08
VPS34YLR240W TY2A-DR3Q99303 438 aa2.07□□□□□ -2.08
VPS34YLR240W DDP1Q99321 188 aaKnown RBP2.07□□□□□ -2.08
VPS34YLR240W TPK1P06244 397 aa2.06□□□□□ -2.08
VPS34YLR240W NUC1P08466 329 aa2.06□□□□□ -2.08
VPS34YLR240W IFA38P38286 347 aa2.06□□□□□ -2.08
VPS34YLR240W RTS1P38903 757 aa2.06□□□□□ -2.08
VPS34YLR240W NPR2P39923 615 aa2.06□□□□□ -2.08
VPS34YLR240W CTF18P49956 741 aa2.06□□□□□ -2.08
VPS34YLR240W COG1P53079 417 aa2.06□□□□□ -2.08
VPS34YLR240W PDR8Q06149 701 aa2.06□□□□□ -2.08
VPS34YLR240W GPA1P08539 472 aa2.06□□□□□ -2.08
VPS34YLR240W SUI3P09064 285 aaKnown RBP2.06□□□□□ -2.08
VPS34YLR240W SRP54P20424 541 aaKnown RBP2.06□□□□□ -2.08
VPS34YLR240W MGM1P32266 881 aa2.06□□□□□ -2.08
VPS34YLR240W FLO5P38894 1075 aa2.06□□□□□ -2.08
VPS34YLR240W SMK1P41808 388 aa2.06□□□□□ -2.08
VPS34YLR240W YPT11P48559 417 aa2.06□□□□□ -2.08
VPS34YLR240W YGL082WP53155 381 aa2.06□□□□□ -2.08
VPS34YLR240W SVL3Q03088 825 aaKnown RBP2.06□□□□□ -2.08
VPS34YLR240W YLR455WQ06188 304 aa2.06□□□□□ -2.08
VPS34YLR240W ATX2Q12067 313 aa2.06□□□□□ -2.08
VPS34YLR240W COX17Q12287 69 aa2.06□□□□□ -2.08
VPS34YLR240W PMD1P32634 1753 aa2.06□□□□□ -2.08
VPS34YLR240W MRP2P10663 115 aaPredicted RBP2.05□□□□□ -2.08
VPS34YLR240W PFK2P16862 959 aaKnown RBP RIP-Chip data2.05□□□□□ -2.08not detected
VPS34YLR240W BMH1P29311 267 aaKnown RBP2.05□□□□□ -2.08
VPS34YLR240W RAD16P31244 790 aa2.05□□□□□ -2.08
VPS34YLR240W KTR3P38130 404 aaPredicted RBP2.05□□□□□ -2.08
VPS34YLR240W VPS41P38959 992 aa2.05□□□□□ -2.08
VPS34YLR240W PSP1P50896 841 aaKnown RBP2.05□□□□□ -2.08
VPS34YLR240W YNL144CP53907 740 aa2.05□□□□□ -2.08
VPS34YLR240W ARP5P53946 755 aa2.05□□□□□ -2.08
VPS34YLR240W ATG16Q03818 150 aa2.05□□□□□ -2.08
VPS34YLR240W TIP41Q12199 356 aa2.05□□□□□ -2.08
VPS34YLR240W PCD1Q12524 340 aa2.05□□□□□ -2.08
VPS34YLR240W GSC2P40989 1895 aa2.05□□□□□ -2.08
VPS34YLR240W PWP2P25635 923 aaKnown RBP2.05□□□□□ -2.08
VPS34YLR240W MRS6P32864 603 aaKnown RBP2.05□□□□□ -2.08
VPS34YLR240W MIC60P36112 540 aa2.05□□□□□ -2.08
VPS34YLR240W RKM3P38222 552 aa2.05□□□□□ -2.08
VPS34YLR240W IST3P40565 148 aaPredicted RBP2.05□□□□□ -2.08
VPS34YLR240W YFH7P43591 353 aa2.05□□□□□ -2.08
VPS34YLR240W MDV1P47025 714 aa2.05□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 22.2 ms