RNA–Protein interactions for RNA: YLR135W

SLX4, Transcript of Endonuclease involved in processing DNA, yeastyeast

Gene SLX4, Length 2,247 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SLX4YLR135W SRO77P38163 1010 aa1.49□□□□□ -2.17
SLX4YLR135W CST26P38226 397 aa1.49□□□□□ -2.17
SLX4YLR135W IMD2P38697 523 aaKnown RBP1.49□□□□□ -2.17
SLX4YLR135W RIX1P38883 763 aaPredicted RBP1.49□□□□□ -2.17
SLX4YLR135W ELO1P39540 310 aa1.49□□□□□ -2.17
SLX4YLR135W YEL057CP39983 233 aa1.49□□□□□ -2.17
SLX4YLR135W LSM5P40089 93 aaKnown RBP1.49□□□□□ -2.17
SLX4YLR135W MET18P40469 1032 aa1.49□□□□□ -2.17
SLX4YLR135W YJL107CP42947 387 aa1.49□□□□□ -2.17
SLX4YLR135W TAX4P47030 604 aa1.49□□□□□ -2.17
SLX4YLR135W RPS7BP48164 190 aaKnown RBP1.49□□□□□ -2.17
SLX4YLR135W IMD3P50095 523 aaKnown RBP1.49□□□□□ -2.17
SLX4YLR135W YGR127WP53275 312 aa1.49□□□□□ -2.17
SLX4YLR135W RPT6Q01939 405 aaKnown RBP1.49□□□□□ -2.17
SLX4YLR135W YPL071CQ02864 156 aa1.49□□□□□ -2.17
SLX4YLR135W SNU56Q03782 492 aaKnown RBP1.49□□□□□ -2.17
SLX4YLR135W SWF1Q04629 336 aa1.49□□□□□ -2.17
SLX4YLR135W TPO3Q06451 622 aa1.49□□□□□ -2.17
SLX4YLR135W LUC7Q07508 261 aaPredicted RBP1.49□□□□□ -2.17
SLX4YLR135W BUD7Q08754 746 aa1.49□□□□□ -2.17
SLX4YLR135W LEU9Q12166 604 aaKnown RBP1.49□□□□□ -2.17
SLX4YLR135W RTN2Q12443 393 aa1.49□□□□□ -2.17
SLX4YLR135W HSH49Q99181 213 aaPredicted RBP1.49□□□□□ -2.17
SLX4YLR135W BNR1P40450 1375 aa1.49□□□□□ -2.17
SLX4YLR135W SPE2P21182 396 aa1.48□□□□□ -2.17
SLX4YLR135W PRD1P25375 712 aa1.48□□□□□ -2.17
SLX4YLR135W COQ3P27680 312 aa1.48□□□□□ -2.17
SLX4YLR135W MRE11P32829 692 aa1.48□□□□□ -2.17
SLX4YLR135W PPZ2P33329 710 aa1.48□□□□□ -2.17
SLX4YLR135W SEC66P33754 206 aa1.48□□□□□ -2.17
SLX4YLR135W WBP1P33767 430 aaKnown RBP1.48□□□□□ -2.17
SLX4YLR135W YBL055CP34220 418 aaPredicted RBP1.48□□□□□ -2.17
SLX4YLR135W UBP11P36026 717 aa1.48□□□□□ -2.17
SLX4YLR135W REG2P38232 338 aa1.48□□□□□ -2.17
SLX4YLR135W TSC10P38342 320 aa1.48□□□□□ -2.17
SLX4YLR135W AXL1P40851 1208 aa1.48□□□□□ -2.17
SLX4YLR135W IRC7P43623 340 aa1.48□□□□□ -2.17
SLX4YLR135W NMD5P46970 1048 aa1.48□□□□□ -2.17
SLX4YLR135W LYS20P48570 428 aaKnown RBP1.48□□□□□ -2.17
SLX4YLR135W ATP23P53722 227 aa1.48□□□□□ -2.17
SLX4YLR135W MAK10Q02197 733 aa1.48□□□□□ -2.17
SLX4YLR135W SYF1Q04048 859 aaPredicted RBP1.48□□□□□ -2.17
SLX4YLR135W CAC2Q04199 468 aa1.48□□□□□ -2.17
SLX4YLR135W RQC1Q05468 723 aaKnown RBP1.48□□□□□ -2.17
SLX4YLR135W MRD1Q06106 887 aaKnown RBP1.48□□□□□ -2.17
SLX4YLR135W MCH4Q08268 501 aa1.48□□□□□ -2.17
SLX4YLR135W YOR389WQ08912 624 aa1.48□□□□□ -2.17
SLX4YLR135W YLR049CQ12110 428 aa1.48□□□□□ -2.17
SLX4YLR135W AVL9Q12500 764 aa1.48□□□□□ -2.17
SLX4YLR135W PUT2P07275 575 aa1.48□□□□□ -2.17
SLX4YLR135W FUR1P18562 216 aaKnown RBP1.48□□□□□ -2.17
SLX4YLR135W TKL1P23254 680 aaKnown RBP1.48□□□□□ -2.17
SLX4YLR135W BUD5P25300 642 aaPredicted RBP1.48□□□□□ -2.17
SLX4YLR135W PEP3P27801 918 aa1.48□□□□□ -2.17
SLX4YLR135W SEF1P34228 1148 aa1.48□□□□□ -2.17
SLX4YLR135W YKL100CP34248 587 aa1.48□□□□□ -2.17
SLX4YLR135W PXL1P36166 706 aa1.48□□□□□ -2.17
SLX4YLR135W VID24P38263 362 aa1.48□□□□□ -2.17
SLX4YLR135W TOM71P38825 639 aaKnown RBP1.48□□□□□ -2.17
SLX4YLR135W SMF1P38925 575 aa1.48□□□□□ -2.17
SLX4YLR135W VPS41P38959 992 aa1.48□□□□□ -2.17
SLX4YLR135W BUR6P40096 142 aa1.48□□□□□ -2.17
SLX4YLR135W SNO3P43544 222 aa1.48□□□□□ -2.17
SLX4YLR135W UBP8P50102 471 aa1.48□□□□□ -2.17
SLX4YLR135W ERG26P53199 349 aaKnown RBP1.48□□□□□ -2.17
SLX4YLR135W NNF2P53253 936 aa1.48□□□□□ -2.17
SLX4YLR135W YGR250CP53316 781 aaKnown RBP1.48□□□□□ -2.17
SLX4YLR135W YTP1P53584 459 aa1.48□□□□□ -2.17
SLX4YLR135W IDP3P53982 420 aaKnown RBP1.48□□□□□ -2.17
SLX4YLR135W ASI1P54074 624 aa1.48□□□□□ -2.17
SLX4YLR135W ORM2Q06144 216 aa1.48□□□□□ -2.17
SLX4YLR135W PDR8Q06149 701 aa1.48□□□□□ -2.17
SLX4YLR135W APL4Q12028 832 aa1.48□□□□□ -2.17
SLX4YLR135W ATG29Q12092 213 aa1.48□□□□□ -2.17
SLX4YLR135W ERP4Q12450 207 aa1.48□□□□□ -2.17
SLX4YLR135W PGK1P00560 416 aaKnown RBP1.47□□□□□ -2.17
SLX4YLR135W MET17P06106 444 aa1.47□□□□□ -2.17
SLX4YLR135W HOM2P13663 365 aaKnown RBP1.47□□□□□ -2.17
SLX4YLR135W NUP1P20676 1076 aa1.47□□□□□ -2.17
SLX4YLR135W KGD1P20967 1014 aaKnown RBP1.47□□□□□ -2.17
SLX4YLR135W CNA1P23287 553 aa1.47□□□□□ -2.17
SLX4YLR135W RPC53P25441 422 aa1.47□□□□□ -2.17
SLX4YLR135W TIF3P34167 436 aaKnown RBP1.47□□□□□ -2.17
SLX4YLR135W YBR144CP34215 104 aa1.47□□□□□ -2.17
SLX4YLR135W TCD2P36101 447 aaKnown RBP1.47□□□□□ -2.17
SLX4YLR135W ARP1P38696 384 aa1.47□□□□□ -2.17
SLX4YLR135W OTU2P38747 307 aaKnown RBP1.47□□□□□ -2.17
SLX4YLR135W ALG5P40350 334 aa1.47□□□□□ -2.17
SLX4YLR135W CFD1P40558 293 aa1.47□□□□□ -2.17
SLX4YLR135W PYK2P52489 506 aaKnown RBP1.47□□□□□ -2.17
SLX4YLR135W HOS2P53096 452 aaPredicted RBP1.47□□□□□ -2.17
SLX4YLR135W LCL3P53153 274 aa1.47□□□□□ -2.17
SLX4YLR135W TWF1P53250 332 aa1.47□□□□□ -2.17
SLX4YLR135W MSC1Q03104 513 aa1.47□□□□□ -2.17
SLX4YLR135W PFA5Q03289 374 aa1.47□□□□□ -2.17
SLX4YLR135W SEG1Q04279 960 aa1.47□□□□□ -2.17
SLX4YLR135W DPB4Q04603 196 aaKnown RBP1.47□□□□□ -2.17
SLX4YLR135W VPS38Q05919 439 aa1.47□□□□□ -2.17
SLX4YLR135W ATG26Q06321 1198 aa1.47□□□□□ -2.17
SLX4YLR135W YOL159CQ08300 171 aa1.47□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 76.9 ms