RNA–Protein interactions for RNA: YLR132C

USB1, Transcript of Putative phosphodiesterase specific for U6 snRNA 3' end modification, yeastyeast

Gene USB1, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USB1YLR132C RAD9P14737 1309 aa4.31□□□□□ -1.72
USB1YLR132C PDR8Q06149 701 aa4.31□□□□□ -1.72
USB1YLR132C SKG3Q06315 1026 aa4.31□□□□□ -1.72
USB1YLR132C CDC16P09798 840 aa4.3□□□□□ -1.72
USB1YLR132C PCT1P13259 424 aa4.3□□□□□ -1.72
USB1YLR132C SPE2P21182 396 aa4.3□□□□□ -1.72
USB1YLR132C YCR006CP25350 157 aa4.3□□□□□ -1.72
USB1YLR132C YUR1P26725 428 aa4.3□□□□□ -1.72
USB1YLR132C COQ3P27680 312 aa4.3□□□□□ -1.72
USB1YLR132C MUD2P36084 527 aaKnown RBP4.3□□□□□ -1.72
USB1YLR132C ESL2P36168 1195 aa4.3□□□□□ -1.72
USB1YLR132C NOP4P37838 685 aaKnown RBP4.3□□□□□ -1.72
USB1YLR132C ADE17P38009 592 aaKnown RBP4.3□□□□□ -1.72
USB1YLR132C AGP2P38090 596 aa4.3□□□□□ -1.72
USB1YLR132C ARN1P38731 627 aa4.3□□□□□ -1.72
USB1YLR132C RTS1P38903 757 aa4.3□□□□□ -1.72
USB1YLR132C NPR2P39923 615 aa4.3□□□□□ -1.72
USB1YLR132C NOP16P40007 231 aaKnown RBP4.3□□□□□ -1.72
USB1YLR132C DOT5P40553 215 aa4.3□□□□□ -1.72
USB1YLR132C LYS14P40971 790 aa4.3□□□□□ -1.72
USB1YLR132C SIP4P46954 829 aa4.3□□□□□ -1.72
USB1YLR132C LYS4P49367 693 aaPredicted RBP4.3□□□□□ -1.72
USB1YLR132C UBP8P50102 471 aa4.3□□□□□ -1.72
USB1YLR132C YPR003CP53394 754 aa4.3□□□□□ -1.72
USB1YLR132C TDA9Q04545 1251 aa4.3□□□□□ -1.72
USB1YLR132C PSR1Q07800 427 aa4.3□□□□□ -1.72
USB1YLR132C SRP54P20424 541 aaKnown RBP4.29□□□□□ -1.72
USB1YLR132C RPN12P32496 274 aa4.29□□□□□ -1.72
USB1YLR132C PAH1P32567 862 aa4.29□□□□□ -1.72
USB1YLR132C UBP13P38187 747 aa4.29□□□□□ -1.72
USB1YLR132C ECM10P39987 644 aa4.29□□□□□ -1.72
USB1YLR132C SWP82P43554 623 aa4.29□□□□□ -1.72
USB1YLR132C PFA5Q03289 374 aa4.29□□□□□ -1.72
USB1YLR132C RAD30Q04049 632 aa4.29□□□□□ -1.72
USB1YLR132C MCH4Q08268 501 aa4.29□□□□□ -1.72
USB1YLR132C RAV1P47104 1357 aa4.28□□□□□ -1.72
USB1YLR132C SEM1O94742 89 aa4.28□□□□□ -1.72
USB1YLR132C SEC53P07283 254 aaKnown RBP4.28□□□□□ -1.72
USB1YLR132C RAP1P11938 827 aa4.28□□□□□ -1.72
USB1YLR132C VMA16P23968 213 aa4.28□□□□□ -1.72
USB1YLR132C OCT1P35999 772 aa4.28□□□□□ -1.72
USB1YLR132C ERV46P39727 415 aa4.28□□□□□ -1.72
USB1YLR132C BUR6P40096 142 aa4.28□□□□□ -1.72
USB1YLR132C SEC24P40482 926 aaKnown RBP4.28□□□□□ -1.72
USB1YLR132C YJL107CP42947 387 aa4.28□□□□□ -1.72
USB1YLR132C CTK2P46962 323 aa4.28□□□□□ -1.72
USB1YLR132C DPB11P47027 764 aaPredicted RBP4.28□□□□□ -1.72
USB1YLR132C SMC3P47037 1230 aa4.28□□□□□ -1.72
USB1YLR132C PIL1P53252 339 aaKnown RBP4.28□□□□□ -1.72
USB1YLR132C NNF2P53253 936 aa4.28□□□□□ -1.72
USB1YLR132C ENT4Q07872 247 aa4.28□□□□□ -1.72
USB1YLR132C RRI2Q12348 645 aa4.28□□□□□ -1.72
USB1YLR132C YBR126W-AQ8TGU7 68 aa4.28□□□□□ -1.72
USB1YLR132C PSK1P31374 1356 aa4.27□□□□□ -1.73
USB1YLR132C ROM2P51862 1356 aaKnown RBP4.27□□□□□ -1.73
USB1YLR132C SNF2P22082 1703 aa4.27□□□□□ -1.73
USB1YLR132C SAN1P22470 610 aa4.27□□□□□ -1.73
USB1YLR132C SAC6P32599 642 aaKnown RBP4.27□□□□□ -1.73
USB1YLR132C YKL050CP35736 922 aa4.27□□□□□ -1.73
USB1YLR132C YNG2P38806 282 aaKnown RBP4.27□□□□□ -1.73
USB1YLR132C ERP2P39704 215 aa4.27□□□□□ -1.73
USB1YLR132C TPA1P40032 644 aaKnown RBP4.27□□□□□ -1.73
USB1YLR132C YNL144CP53907 740 aa4.27□□□□□ -1.73
USB1YLR132C SWF1Q04629 336 aa4.27□□□□□ -1.73
USB1YLR132C COG4Q06096 861 aa4.27□□□□□ -1.73
USB1YLR132C YLR455WQ06188 304 aa4.27□□□□□ -1.73
USB1YLR132C GPN2Q08726 347 aaPredicted RBP4.27□□□□□ -1.73
USB1YLR132C APL4Q12028 832 aa4.27□□□□□ -1.73
USB1YLR132C GET3Q12154 354 aaKnown RBP4.27□□□□□ -1.73
USB1YLR132C AAC3P18238 307 aa4.26□□□□□ -1.73
USB1YLR132C YAP1P19880 650 aaKnown RBP4.26□□□□□ -1.73
USB1YLR132C IMP2'P32351 346 aa4.26□□□□□ -1.73
USB1YLR132C SCO2P38072 301 aa4.26□□□□□ -1.73
USB1YLR132C MAL33P38157 468 aa4.26□□□□□ -1.73
USB1YLR132C UIP3P39547 235 aa4.26□□□□□ -1.73
USB1YLR132C AFG3P39925 761 aa4.26□□□□□ -1.73
USB1YLR132C JHD1P40034 492 aa4.26□□□□□ -1.73
USB1YLR132C PKP1P40530 394 aa4.26□□□□□ -1.73
USB1YLR132C IRC8P47046 822 aa4.26□□□□□ -1.73
USB1YLR132C YSA1Q01976 231 aa4.26□□□□□ -1.73
USB1YLR132C INA17Q02888 182 aa4.26□□□□□ -1.73
USB1YLR132C VIP1Q06685 1146 aaKnown RBP4.26□□□□□ -1.73
USB1YLR132C RIX7Q07844 837 aaKnown RBP4.26□□□□□ -1.73
USB1YLR132C CRC1Q12289 327 aa4.26□□□□□ -1.73
USB1YLR132C RRI1Q12468 440 aa4.26□□□□□ -1.73
USB1YLR132C NOP58Q12499 511 aaKnown RBP4.26□□□□□ -1.73
USB1YLR132C PET111P08468 800 aa4.25□□□□□ -1.73
USB1YLR132C YMR085WP0CF18 432 aa4.25□□□□□ -1.73
USB1YLR132C HSC82P15108 705 aaKnown RBP4.25□□□□□ -1.73
USB1YLR132C SAC1P32368 623 aaKnown RBP4.25□□□□□ -1.73
USB1YLR132C PDB1P32473 366 aaKnown RBP4.25□□□□□ -1.73
USB1YLR132C AUR1P36107 401 aaPredicted RBP4.25□□□□□ -1.73
USB1YLR132C DIA4P38705 446 aaPredicted RBP4.25□□□□□ -1.73
USB1YLR132C FMP10P40098 244 aa4.25□□□□□ -1.73
USB1YLR132C CFD1P40558 293 aa4.25□□□□□ -1.73
USB1YLR132C CDC1P40986 491 aa4.25□□□□□ -1.73
USB1YLR132C SCW4P53334 386 aaKnown RBP4.25□□□□□ -1.73
USB1YLR132C COP1P53622 1201 aaKnown RBP4.25□□□□□ -1.73
USB1YLR132C INN1P53901 409 aa4.25□□□□□ -1.73
USB1YLR132C ZDS2P54786 942 aa4.25□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 13.8 ms