RNA–Protein interactions for RNA: YKL054C

DEF1, Transcript of RNAPII degradation factor, yeastyeast

Gene DEF1, Length 2,217 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DEF1YKL054C PZF1P39933 429 aa6.01□□□□□ -1.45
DEF1YKL054C GET2P40056 285 aa6.01□□□□□ -1.45
DEF1YKL054C ARI1P53111 347 aaKnown RBP6.01□□□□□ -1.45
DEF1YKL054C BOP3P53958 396 aa6.01□□□□□ -1.45
DEF1YKL054C UFO1Q04511 668 aa6.01□□□□□ -1.45
DEF1YKL054C MRPL1Q04599 285 aa6.01□□□□□ -1.45
DEF1YKL054C YLR413WQ06689 675 aa6.01□□□□□ -1.45
DEF1YKL054C HBT1Q07653 1046 aaKnown RBP6.01□□□□□ -1.45
DEF1YKL054C ULA1Q12059 462 aa6.01□□□□□ -1.45
DEF1YKL054C RLM1Q12224 676 aa6.01□□□□□ -1.45
DEF1YKL054C ECM3Q99252 613 aa6.01□□□□□ -1.45
DEF1YKL054C SMY1P32364 656 aaKnown RBP6.01□□□□□ -1.45
DEF1YKL054C PDB1P32473 366 aaKnown RBP6.01□□□□□ -1.45
DEF1YKL054C SEC31P38968 1273 aaKnown RBP6.01□□□□□ -1.45
DEF1YKL054C GCN20P43535 752 aaKnown RBP6.01□□□□□ -1.45
DEF1YKL054C CTR1P49573 406 aa6.01□□□□□ -1.45
DEF1YKL054C IMO32P53219 342 aa6.01□□□□□ -1.45
DEF1YKL054C RPN9Q04062 393 aaKnown RBP6.01□□□□□ -1.45
DEF1YKL054C RPL3P14126 387 aaKnown RBP6□□□□□ -1.45
DEF1YKL054C PRD1P25375 712 aa6□□□□□ -1.45
DEF1YKL054C YCR061WP25639 631 aa6□□□□□ -1.45
DEF1YKL054C DOA4P32571 926 aa6□□□□□ -1.45
DEF1YKL054C MRPL4P36517 319 aa6□□□□□ -1.45
DEF1YKL054C MSS4P38994 779 aa6□□□□□ -1.45
DEF1YKL054C ECM1P39715 212 aa6□□□□□ -1.45
DEF1YKL054C IAH1P41734 238 aa6□□□□□ -1.45
DEF1YKL054C PAN2P53010 1115 aaPredicted RBP6□□□□□ -1.45
DEF1YKL054C STR3P53101 465 aaKnown RBP6□□□□□ -1.45
DEF1YKL054C UTP6Q02354 440 aaKnown RBP6□□□□□ -1.45
DEF1YKL054C ACL4Q03771 387 aa6□□□□□ -1.45
DEF1YKL054C RGC1Q06108 1083 aaKnown RBP6□□□□□ -1.45
DEF1YKL054C RPS9BP05755 195 aaKnown RBP5.99□□□□□ -1.45
DEF1YKL054C KIN82P25341 720 aa5.99□□□□□ -1.45
DEF1YKL054C TPO5P36029 618 aa5.99□□□□□ -1.45
DEF1YKL054C YNG2P38806 282 aaKnown RBP5.99□□□□□ -1.45
DEF1YKL054C MNN9P39107 395 aaKnown RBP5.99□□□□□ -1.45
DEF1YKL054C YIL077CP40508 320 aa5.99□□□□□ -1.45
DEF1YKL054C SMA1Q02651 245 aa5.99□□□□□ -1.45
DEF1YKL054C MRPL23Q12487 163 aaPredicted RBP5.99□□□□□ -1.45
DEF1YKL054C CAR2P07991 424 aaKnown RBP5.99□□□□□ -1.45
DEF1YKL054C UNG1P12887 359 aa5.99□□□□□ -1.45
DEF1YKL054C GCD7P32502 381 aaPredicted RBP5.99□□□□□ -1.45
DEF1YKL054C YBR139WP38109 508 aa5.99□□□□□ -1.45
DEF1YKL054C PFF1P38244 976 aa5.99□□□□□ -1.45
DEF1YKL054C TOS1P38288 455 aa5.99□□□□□ -1.45
DEF1YKL054C ETP1P38748 585 aaKnown RBP5.99□□□□□ -1.45
DEF1YKL054C LIN1P38852 340 aaPredicted RBP5.99□□□□□ -1.45
DEF1YKL054C YJL206CP39529 758 aa5.99□□□□□ -1.45
DEF1YKL054C ALD5P40047 520 aaKnown RBP5.99□□□□□ -1.45
DEF1YKL054C URM1P40554 99 aaPredicted RBP5.99□□□□□ -1.45
DEF1YKL054C IMD4P50094 524 aaKnown RBP5.99□□□□□ -1.45
DEF1YKL054C YGL242CP53066 181 aa5.99□□□□□ -1.45
DEF1YKL054C MNT4P53745 580 aa5.99□□□□□ -1.45
DEF1YKL054C SEG1Q04279 960 aa5.99□□□□□ -1.45
DEF1YKL054C PCL8Q08966 492 aa5.99□□□□□ -1.45
DEF1YKL054C AIM41Q12032 185 aa5.99□□□□□ -1.45
DEF1YKL054C NBL1Q3E7Y6 73 aa5.99□□□□□ -1.45
DEF1YKL054C YLR415CO13578 112 aa5.98□□□□□ -1.45
DEF1YKL054C GCD2P12754 651 aaPredicted RBP5.98□□□□□ -1.45
DEF1YKL054C RPB4P20433 221 aaPredicted RBP5.98□□□□□ -1.45
DEF1YKL054C ASF2P32448 525 aaPredicted RBP5.98□□□□□ -1.45
DEF1YKL054C GDT1P38301 280 aaPredicted RBP5.98□□□□□ -1.45
DEF1YKL054C GIP4P39732 760 aa5.98□□□□□ -1.45
DEF1YKL054C AIM10P39965 576 aaKnown RBP5.98□□□□□ -1.45
DEF1YKL054C YTA12P40341 825 aa5.98□□□□□ -1.45
DEF1YKL054C BUG1Q12191 341 aa5.98□□□□□ -1.45
DEF1YKL054C NDJ1Q12366 352 aa5.98□□□□□ -1.45
DEF1YKL054C VPS63O13549 108 aa5.98□□□□□ -1.45
DEF1YKL054C JIP3O13555 125 aa5.98□□□□□ -1.45
DEF1YKL054C YBR085C-AO43137 85 aa5.98□□□□□ -1.45
DEF1YKL054C YSP3P25036 478 aa5.98□□□□□ -1.45
DEF1YKL054C YCR015CP25616 317 aa5.98□□□□□ -1.45
DEF1YKL054C APL1P27351 700 aa5.98□□□□□ -1.45
DEF1YKL054C RME1P32338 300 aaKnown RBP5.98□□□□□ -1.45
DEF1YKL054C YBR259WP38338 688 aa5.98□□□□□ -1.45
DEF1YKL054C SSO2P39926 295 aa5.98□□□□□ -1.45
DEF1YKL054C YJL132WP47014 750 aa5.98□□□□□ -1.45
DEF1YKL054C TOM22P49334 152 aa5.98□□□□□ -1.45
DEF1YKL054C RPT4P53549 437 aaKnown RBP5.98□□□□□ -1.45
DEF1YKL054C SLU7Q02775 382 aaKnown RBP5.98□□□□□ -1.45
DEF1YKL054C INP2Q03824 705 aa5.98□□□□□ -1.45
DEF1YKL054C DIB1Q06819 143 aaPredicted RBP5.98□□□□□ -1.45
DEF1YKL054C STE3P06783 470 aa5.97□□□□□ -1.45
DEF1YKL054C CBP1P07252 654 aa5.97□□□□□ -1.45
DEF1YKL054C SPE1P08432 466 aa5.97□□□□□ -1.45
DEF1YKL054C KGD1P20967 1014 aaKnown RBP5.97□□□□□ -1.45
DEF1YKL054C NTH1P32356 751 aa5.97□□□□□ -1.45
DEF1YKL054C YBL055CP34220 418 aaPredicted RBP5.97□□□□□ -1.45
DEF1YKL054C ATP3P38077 311 aaKnown RBP5.97□□□□□ -1.45
DEF1YKL054C SWP82P43554 623 aa5.97□□□□□ -1.45
DEF1YKL054C GCD14P46959 383 aaPredicted RBP5.97□□□□□ -1.45
DEF1YKL054C VID30P53076 958 aa5.97□□□□□ -1.45
DEF1YKL054C FIN1Q03898 291 aa5.97□□□□□ -1.45
DEF1YKL054C HOF1Q05080 669 aa5.97□□□□□ -1.45
DEF1YKL054C BOP2Q06150 570 aa5.97□□□□□ -1.45
DEF1YKL054C YIL002W-AQ3E7Z5 69 aa5.97□□□□□ -1.45
DEF1YKL054C SSE2P32590 693 aaKnown RBP5.97□□□□□ -1.45
DEF1YKL054C HCS1P34243 683 aa5.97□□□□□ -1.45
DEF1YKL054C YMR124WP39523 943 aaKnown RBP5.97□□□□□ -1.45
DEF1YKL054C COX18P53239 316 aa5.97□□□□□ -1.45
Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms