RNA–Protein interactions for RNA: YJL006C

CTK2, Transcript of Beta subunit of C-terminal domain kinase I (CTDK-I), yeastyeast

Gene CTK2, Length 972 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK2YJL006C CBK1P53894 756 aa3.72□□□□□ -1.81
CTK2YJL006C CTL1Q03220 320 aaKnown RBP3.72□□□□□ -1.81
CTK2YJL006C PPT2Q12036 173 aa3.72□□□□□ -1.81
CTK2YJL006C YOR019WQ99248 730 aa3.72□□□□□ -1.81
CTK2YJL006C BUD14P27637 709 aa3.71□□□□□ -1.82
CTK2YJL006C SSH4P32343 579 aa3.71□□□□□ -1.82
CTK2YJL006C MRP20P32387 263 aa3.71□□□□□ -1.82
CTK2YJL006C ECM10P39987 644 aa3.71□□□□□ -1.82
CTK2YJL006C RTS2P40962 232 aa3.71□□□□□ -1.82
CTK2YJL006C IME4P41833 600 aa3.71□□□□□ -1.82
CTK2YJL006C SGF73P53165 657 aa3.71□□□□□ -1.82
CTK2YJL006C MUB1Q03162 620 aa3.71□□□□□ -1.82
CTK2YJL006C PFA5Q03289 374 aa3.71□□□□□ -1.82
CTK2YJL006C OPY2Q06810 360 aa3.71□□□□□ -1.82
CTK2YJL006C NBP2Q12163 236 aa3.71□□□□□ -1.82
CTK2YJL006C CSR2Q12734 1121 aa3.71□□□□□ -1.82
CTK2YJL006C FUM1P08417 488 aaKnown RBP3.7□□□□□ -1.82
CTK2YJL006C GLN3P18494 730 aa3.7□□□□□ -1.82
CTK2YJL006C TKL1P23254 680 aaKnown RBP3.7□□□□□ -1.82
CTK2YJL006C SIP4P46954 829 aa3.7□□□□□ -1.82
CTK2YJL006C PIL1P53252 339 aaKnown RBP3.7□□□□□ -1.82
CTK2YJL006C IST1P53843 298 aaPredicted RBP3.7□□□□□ -1.82
CTK2YJL006C YBR085C-AO43137 85 aa3.69□□□□□ -1.82
CTK2YJL006C CBS2P14905 389 aa3.69□□□□□ -1.82
CTK2YJL006C ALY1P36117 915 aa3.69□□□□□ -1.82
CTK2YJL006C AVT5P38176 459 aa3.69□□□□□ -1.82
CTK2YJL006C FAA2P39518 744 aa3.69□□□□□ -1.82
CTK2YJL006C FMP10P40098 244 aa3.69□□□□□ -1.82
CTK2YJL006C SLZ1P40167 298 aa3.69□□□□□ -1.82
CTK2YJL006C HXT9P40885 567 aa3.69□□□□□ -1.82
CTK2YJL006C SAC1P32368 623 aaKnown RBP3.68□□□□□ -1.82
CTK2YJL006C ESL2P36168 1195 aa3.68□□□□□ -1.82
CTK2YJL006C SEC24P40482 926 aaKnown RBP3.68□□□□□ -1.82
CTK2YJL006C DPH1P40487 425 aaKnown RBP3.68□□□□□ -1.82
CTK2YJL006C YFR020WP43600 232 aa3.68□□□□□ -1.82
CTK2YJL006C SHE10P53075 577 aa3.68□□□□□ -1.82
CTK2YJL006C MEP3P53390 489 aa3.68□□□□□ -1.82
CTK2YJL006C INN1P53901 409 aa3.68□□□□□ -1.82
CTK2YJL006C ADD37Q03233 198 aa3.68□□□□□ -1.82
CTK2YJL006C HXK2P04807 486 aaKnown RBP3.67□□□□□ -1.82
CTK2YJL006C RAP1P11938 827 aa3.67□□□□□ -1.82
CTK2YJL006C MCM10P32354 571 aa3.67□□□□□ -1.82
CTK2YJL006C TIF3P34167 436 aaKnown RBP3.67□□□□□ -1.82
CTK2YJL006C VID27P40157 782 aa3.67□□□□□ -1.82
CTK2YJL006C PKP1P40530 394 aa3.67□□□□□ -1.82
CTK2YJL006C ARC1P46672 376 aaKnown RBP3.67□□□□□ -1.82
CTK2YJL006C SMC3P47037 1230 aa3.67□□□□□ -1.82
CTK2YJL006C AAD10P47182 288 aa3.67□□□□□ -1.82
CTK2YJL006C INA17Q02888 182 aa3.67□□□□□ -1.82
CTK2YJL006C YMR018WQ04364 514 aa3.67□□□□□ -1.82
CTK2YJL006C EDE1P34216 1381 aa3.66□□□□□ -1.82
CTK2YJL006C KTR3P38130 404 aaPredicted RBP3.66□□□□□ -1.82
CTK2YJL006C YNG2P38806 282 aaKnown RBP3.66□□□□□ -1.82
CTK2YJL006C FET5P43561 622 aa3.66□□□□□ -1.82
CTK2YJL006C DPB11P47027 764 aaPredicted RBP3.66□□□□□ -1.82
CTK2YJL006C YMR178WQ03219 274 aaKnown RBP3.66□□□□□ -1.82
CTK2YJL006C SKG3Q06315 1026 aa3.66□□□□□ -1.82
CTK2YJL006C SKM1Q12469 655 aa3.66□□□□□ -1.82
CTK2YJL006C MON2P48563 1636 aaPredicted RBP3.66□□□□□ -1.82
CTK2YJL006C KRS1P15180 591 aaKnown RBP3.65□□□□□ -1.83
CTK2YJL006C CLB2P24869 491 aa3.65□□□□□ -1.83
CTK2YJL006C MRPL4P36517 319 aa3.65□□□□□ -1.83
CTK2YJL006C RTS1P38903 757 aa3.65□□□□□ -1.83
CTK2YJL006C MKT1P40850 830 aaKnown RBP3.65□□□□□ -1.83
CTK2YJL006C YTP1P53584 459 aa3.65□□□□□ -1.83
CTK2YJL006C BSC5P53755 489 aa3.65□□□□□ -1.83
CTK2YJL006C VIP1Q06685 1146 aaKnown RBP3.65□□□□□ -1.83
CTK2YJL006C ATG9Q12142 997 aa3.65□□□□□ -1.83
CTK2YJL006C CDC24P11433 854 aaPredicted RBP3.64□□□□□ -1.83
CTK2YJL006C RPB8P20436 146 aa3.64□□□□□ -1.83
CTK2YJL006C PDB1P32473 366 aaKnown RBP3.64□□□□□ -1.83
CTK2YJL006C STV1P37296 890 aa3.64□□□□□ -1.83
CTK2YJL006C RFC1P38630 861 aaKnown RBP3.64□□□□□ -1.83
CTK2YJL006C DIA4P38705 446 aaPredicted RBP3.64□□□□□ -1.83
CTK2YJL006C UIP3P39547 235 aa3.64□□□□□ -1.83
CTK2YJL006C BUR6P40096 142 aa3.64□□□□□ -1.83
CTK2YJL006C NNF2P53253 936 aa3.64□□□□□ -1.83
CTK2YJL006C MAK10Q02197 733 aa3.64□□□□□ -1.83
CTK2YJL006C SVL3Q03088 825 aaKnown RBP3.64□□□□□ -1.83
CTK2YJL006C PSR1Q07800 427 aa3.64□□□□□ -1.83
CTK2YJL006C RIX7Q07844 837 aaKnown RBP3.64□□□□□ -1.83
CTK2YJL006C ENT4Q07872 247 aa3.64□□□□□ -1.83
CTK2YJL006C INP53Q12271 1107 aa3.64□□□□□ -1.83
CTK2YJL006C INO80P53115 1489 aa3.64□□□□□ -1.83
CTK2YJL006C PRE8P23639 250 aa3.63□□□□□ -1.83
CTK2YJL006C YKL050CP35736 922 aa3.63□□□□□ -1.83
CTK2YJL006C SNU114P36048 1008 aaKnown RBP3.63□□□□□ -1.83
CTK2YJL006C MDM31P38880 579 aa3.63□□□□□ -1.83
CTK2YJL006C YEL068CP39977 110 aa3.63□□□□□ -1.83
CTK2YJL006C YJL068CP40363 299 aa3.63□□□□□ -1.83
CTK2YJL006C DIM1P41819 318 aaKnown RBP3.63□□□□□ -1.83
CTK2YJL006C BOR1P53838 576 aa3.63□□□□□ -1.83
CTK2YJL006C YOL159CQ08300 171 aa3.63□□□□□ -1.83
CTK2YJL006C APL4Q12028 832 aa3.63□□□□□ -1.83
CTK2YJL006C TOP1P04786 769 aa3.62□□□□□ -1.83
CTK2YJL006C RPL19AP0CX82 189 aaKnown RBP3.62□□□□□ -1.83
CTK2YJL006C RPL19BP0CX83 189 aaPredicted RBP3.62□□□□□ -1.83
CTK2YJL006C SPE2P21182 396 aa3.62□□□□□ -1.83
CTK2YJL006C PWP1P21304 576 aaKnown RBP3.62□□□□□ -1.83
CTK2YJL006C GID7P25569 745 aa3.62□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 36.1 ms