RNA–Protein interactions for RNA: YIL056W

VHR1, Transcript of Transcriptional activator, yeast

Gene VHR1, Length 1,923 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VHR1	YIL056W	PTR3	P43606	678 aa		3.16	□□□□□ -1.9
VHR1	YIL056W	EAF7	P53911	425 aa	Known RBP	3.16	□□□□□ -1.9
VHR1	YIL056W	RAD30	Q04049	632 aa		3.16	□□□□□ -1.9
VHR1	YIL056W	EMI2	Q04409	500 aa	Known RBP	3.16	□□□□□ -1.9
VHR1	YIL056W	SRL1	Q08673	210 aa		3.16	□□□□□ -1.9
VHR1	YIL056W	YOL087C	Q99247	1116 aa		3.16	□□□□□ -1.9
VHR1	YIL056W	OPI1	P21957	404 aa		3.15	□□□□□ -1.9
VHR1	YIL056W	YCR043C	P25361	127 aa		3.15	□□□□□ -1.9
VHR1	YIL056W	PCL6	P40038	420 aa		3.15	□□□□□ -1.9
VHR1	YIL056W	RPN11	P43588	306 aa	Known RBP	3.15	□□□□□ -1.9
VHR1	YIL056W	AAD10	P47182	288 aa		3.15	□□□□□ -1.9
VHR1	YIL056W	ESBP6	P53918	673 aa		3.15	□□□□□ -1.9
VHR1	YIL056W	MEH1	Q02205	184 aa		3.15	□□□□□ -1.9
VHR1	YIL056W	FMP42	Q04991	504 aa		3.15	□□□□□ -1.9
VHR1	YIL056W	YLR281C	Q05863	155 aa		3.15	□□□□□ -1.9
VHR1	YIL056W	ECM30	Q06673	1274 aa		3.15	□□□□□ -1.9
VHR1	YIL056W	GRS2	Q06817	618 aa		3.15	□□□□□ -1.9
VHR1	YIL056W	CIR2	Q08822	631 aa		3.15	□□□□□ -1.9
VHR1	YIL056W	GFD2	P25370	566 aa	Known RBP	3.15	□□□□□ -1.91
VHR1	YIL056W	MCM10	P32354	571 aa		3.15	□□□□□ -1.91
VHR1	YIL056W	YPK3	P38070	525 aa		3.15	□□□□□ -1.91
VHR1	YIL056W	DIA4	P38705	446 aa	Predicted RBP	3.15	□□□□□ -1.91
VHR1	YIL056W	RRP3	P38712	501 aa	Known RBP	3.15	□□□□□ -1.91
VHR1	YIL056W	UIP3	P39547	235 aa		3.15	□□□□□ -1.91
VHR1	YIL056W	YIL152W	P40455	235 aa		3.15	□□□□□ -1.91
VHR1	YIL056W	TES1	P41903	349 aa	Known RBP	3.15	□□□□□ -1.91
VHR1	YIL056W	ARC1	P46672	376 aa	Known RBP	3.15	□□□□□ -1.91
VHR1	YIL056W	BUD22	Q04347	519 aa	Known RBP	3.15	□□□□□ -1.91
VHR1	YIL056W	VIP1	Q06685	1146 aa	Known RBP	3.15	□□□□□ -1.91
VHR1	YIL056W	RIX7	Q07844	837 aa	Known RBP	3.15	□□□□□ -1.91
VHR1	YIL056W	TAH18	Q12181	623 aa		3.15	□□□□□ -1.91
VHR1	YIL056W	ARG81	P05085	880 aa		3.14	□□□□□ -1.91
VHR1	YIL056W	MGR1	P25573	417 aa		3.14	□□□□□ -1.91
VHR1	YIL056W	CHS3	P29465	1165 aa		3.14	□□□□□ -1.91
VHR1	YIL056W	ROT2	P38138	954 aa		3.14	□□□□□ -1.91
VHR1	YIL056W	ANS1	P38832	159 aa		3.14	□□□□□ -1.91
VHR1	YIL056W	VID27	P40157	782 aa		3.14	□□□□□ -1.91
VHR1	YIL056W	IAH1	P41734	238 aa		3.14	□□□□□ -1.91
VHR1	YIL056W	STR3	P53101	465 aa	Known RBP	3.14	□□□□□ -1.91
VHR1	YIL056W	PIL1	P53252	339 aa	Known RBP	3.14	□□□□□ -1.91
VHR1	YIL056W	MDM1	Q01846	1127 aa		3.14	□□□□□ -1.91
VHR1	YIL056W	ARP9	Q05123	467 aa		3.14	□□□□□ -1.91
VHR1	YIL056W	LEU9	Q12166	604 aa	Known RBP	3.14	□□□□□ -1.91
VHR1	YIL056W	CLB2	P24869	491 aa		3.13	□□□□□ -1.91
VHR1	YIL056W	RKM3	P38222	552 aa		3.13	□□□□□ -1.91
VHR1	YIL056W	ICS2	P38284	255 aa		3.13	□□□□□ -1.91
VHR1	YIL056W	BZZ1	P38822	633 aa		3.13	□□□□□ -1.91
VHR1	YIL056W	DPH1	P40487	425 aa	Known RBP	3.13	□□□□□ -1.91
VHR1	YIL056W	YIL060W	P40519	144 aa		3.13	□□□□□ -1.91
VHR1	YIL056W	MEP3	P53390	489 aa		3.13	□□□□□ -1.91
VHR1	YIL056W	YNR061C	P53747	219 aa		3.13	□□□□□ -1.91
VHR1	YIL056W	BET4	Q00618	327 aa		3.13	□□□□□ -1.91
VHR1	YIL056W	EKI1	Q03764	534 aa		3.13	□□□□□ -1.91
VHR1	YIL056W	DPB4	Q04603	196 aa	Known RBP	3.13	□□□□□ -1.91
VHR1	YIL056W	RRI2	Q12348	645 aa		3.13	□□□□□ -1.91
VHR1	YIL056W	ADH7	P25377	361 aa		3.13	□□□□□ -1.91
VHR1	YIL056W	MCM4	P30665	933 aa	Known RBP	3.13	□□□□□ -1.91
VHR1	YIL056W	CBF2	P32504	956 aa		3.13	□□□□□ -1.91
VHR1	YIL056W	GCS1	P35197	352 aa		3.13	□□□□□ -1.91
VHR1	YIL056W	MIA40	P36046	403 aa		3.13	□□□□□ -1.91
VHR1	YIL056W	YAT2	P40017	923 aa		3.13	□□□□□ -1.91
VHR1	YIL056W	YGR127W	P53275	312 aa		3.13	□□□□□ -1.91
VHR1	YIL056W	INN1	P53901	409 aa		3.13	□□□□□ -1.91
VHR1	YIL056W	YVH1	Q02256	364 aa	Known RBP	3.13	□□□□□ -1.91
VHR1	YIL056W	YMR254C	Q04838	102 aa		3.13	□□□□□ -1.91
VHR1	YIL056W	ATG26	Q06321	1198 aa		3.13	□□□□□ -1.91
VHR1	YIL056W	YLR352W	Q06479	807 aa		3.13	□□□□□ -1.91
VHR1	YIL056W	GRC3	Q07845	632 aa		3.13	□□□□□ -1.91
VHR1	YIL056W	YOL159C	Q08300	171 aa		3.13	□□□□□ -1.91
VHR1	YIL056W	TIP41	Q12199	356 aa		3.13	□□□□□ -1.91
VHR1	YIL056W	YBR126W-A	Q8TGU7	68 aa		3.13	□□□□□ -1.91
VHR1	YIL056W	SNF3	P10870	884 aa		3.12	□□□□□ -1.91
VHR1	YIL056W	PDB1	P32473	366 aa	Known RBP	3.12	□□□□□ -1.91
VHR1	YIL056W	RAD24	P32641	659 aa		3.12	□□□□□ -1.91
VHR1	YIL056W	SNU114	P36048	1008 aa	Known RBP	3.12	□□□□□ -1.91
VHR1	YIL056W	YNG2	P38806	282 aa	Known RBP	3.12	□□□□□ -1.91
VHR1	YIL056W	YGL082W	P53155	381 aa		3.12	□□□□□ -1.91
VHR1	YIL056W	DUG3	P53871	357 aa		3.12	□□□□□ -1.91
VHR1	YIL056W	MAK10	Q02197	733 aa		3.12	□□□□□ -1.91
VHR1	YIL056W	INA17	Q02888	182 aa		3.12	□□□□□ -1.91
VHR1	YIL056W	ATG9	Q12142	997 aa		3.12	□□□□□ -1.91
VHR1	YIL056W	HSC82	P15108	705 aa	Known RBP	3.11	□□□□□ -1.91
VHR1	YIL056W	HXT9	P40885	567 aa		3.11	□□□□□ -1.91
VHR1	YIL056W	RTS2	P40962	232 aa		3.11	□□□□□ -1.91
VHR1	YIL056W	MEP2	P41948	499 aa		3.11	□□□□□ -1.91
VHR1	YIL056W	YSA1	Q01976	231 aa		3.11	□□□□□ -1.91
VHR1	YIL056W	SMA1	Q02651	245 aa		3.11	□□□□□ -1.91
VHR1	YIL056W	YML037C	Q03703	340 aa		3.11	□□□□□ -1.91
VHR1	YIL056W	TEN1	Q07921	160 aa		3.11	□□□□□ -1.91
VHR1	YIL056W	FOB1	O13329	566 aa		3.11	□□□□□ -1.91
VHR1	YIL056W	HNM1	P19807	563 aa		3.11	□□□□□ -1.91
VHR1	YIL056W	PWP1	P21304	576 aa	Known RBP	3.11	□□□□□ -1.91
VHR1	YIL056W	GAC1	P28006	793 aa		3.11	□□□□□ -1.91
VHR1	YIL056W	SWI3	P32591	825 aa		3.11	□□□□□ -1.91
VHR1	YIL056W	MUD2	P36084	527 aa	Known RBP	3.11	□□□□□ -1.91
VHR1	YIL056W	AUR1	P36107	401 aa	Predicted RBP	3.11	□□□□□ -1.91
VHR1	YIL056W	MUM2	P38236	366 aa		3.11	□□□□□ -1.91
VHR1	YIL056W	ERG7	P38604	731 aa		3.11	□□□□□ -1.91
VHR1	YIL056W	ELO1	P39540	310 aa		3.11	□□□□□ -1.91
VHR1	YIL056W	FMP10	P40098	244 aa		3.11	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 28.4 ms