RNA–Protein interactions for RNA: YHR190W

ERG9, Transcript of Farnesyl-diphosphate farnesyl transferase (squalene synthase), yeastyeast

Gene ERG9, Length 1,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ERG9YHR190W AXL2P38928 823 aa3.61□□□□□ -1.83
ERG9YHR190W KAP123P40069 1113 aaKnown RBP3.61□□□□□ -1.83
ERG9YHR190W LYS14P40971 790 aa3.61□□□□□ -1.83
ERG9YHR190W CDC1P40986 491 aa3.61□□□□□ -1.83
ERG9YHR190W CBK1P53894 756 aa3.61□□□□□ -1.83
ERG9YHR190W CAC2Q04199 468 aa3.61□□□□□ -1.83
ERG9YHR190W FMP42Q04991 504 aa3.61□□□□□ -1.83
ERG9YHR190W ATG23Q06671 453 aa3.61□□□□□ -1.83
ERG9YHR190W CLP1Q08685 445 aaPredicted RBP3.61□□□□□ -1.83
ERG9YHR190W YLR049CQ12110 428 aa3.61□□□□□ -1.83
ERG9YHR190W NFI1Q12216 726 aa3.61□□□□□ -1.83
ERG9YHR190W ECM5Q03214 1411 aa3.61□□□□□ -1.83
ERG9YHR190W STF1P01098 86 aa3.6□□□□□ -1.83
ERG9YHR190W SNF1P06782 633 aaKnown RBP3.6□□□□□ -1.83
ERG9YHR190W PHO2P07269 559 aa3.6□□□□□ -1.83
ERG9YHR190W SKI3P17883 1432 aaKnown RBP3.6□□□□□ -1.83
ERG9YHR190W SIR1P21691 654 aa3.6□□□□□ -1.83
ERG9YHR190W NOP4P37838 685 aaKnown RBP3.6□□□□□ -1.83
ERG9YHR190W OTU2P38747 307 aaKnown RBP3.6□□□□□ -1.83
ERG9YHR190W VPS41P38959 992 aa3.6□□□□□ -1.83
ERG9YHR190W MAD3P47074 515 aa3.6□□□□□ -1.83
ERG9YHR190W ARC35P53731 342 aaKnown RBP3.6□□□□□ -1.83
ERG9YHR190W EAF7P53911 425 aaKnown RBP3.6□□□□□ -1.83
ERG9YHR190W MRPL13Q02204 264 aa3.6□□□□□ -1.83
ERG9YHR190W MTG1Q03151 367 aaPredicted RBP3.6□□□□□ -1.83
ERG9YHR190W YMR155WQ03795 547 aa3.6□□□□□ -1.83
ERG9YHR190W TAF11Q04226 346 aa3.6□□□□□ -1.83
ERG9YHR190W NDL1Q06568 189 aa3.6□□□□□ -1.83
ERG9YHR190W ICL2Q12031 575 aa3.6□□□□□ -1.83
ERG9YHR190W BRR1Q99177 341 aaPredicted RBP3.6□□□□□ -1.83
ERG9YHR190W CHD1P32657 1468 aa3.59□□□□□ -1.83
ERG9YHR190W SUP35P05453 685 aaKnown RBP3.59□□□□□ -1.83
ERG9YHR190W RPL42AP0CX27 106 aaKnown RBP3.59□□□□□ -1.83
ERG9YHR190W RPL42BP0CX28 106 aaKnown RBP3.59□□□□□ -1.83
ERG9YHR190W KSS1P14681 368 aa3.59□□□□□ -1.83
ERG9YHR190W KRR1P25586 316 aaPredicted RBP3.59□□□□□ -1.83
ERG9YHR190W PPZ1P26570 692 aa3.59□□□□□ -1.83
ERG9YHR190W PSO2P30620 661 aa3.59□□□□□ -1.83
ERG9YHR190W IME2P32581 645 aa3.59□□□□□ -1.83
ERG9YHR190W FRD1P32614 470 aaKnown RBP3.59□□□□□ -1.83
ERG9YHR190W MNN2P38069 597 aa3.59□□□□□ -1.83
ERG9YHR190W STT3P39007 718 aaKnown RBP3.59□□□□□ -1.83
ERG9YHR190W SPC72P39723 622 aa3.59□□□□□ -1.83
ERG9YHR190W NOP16P40007 231 aaKnown RBP3.59□□□□□ -1.83
ERG9YHR190W PSF2P40359 213 aa3.59□□□□□ -1.83
ERG9YHR190W NUP84P52891 726 aa3.59□□□□□ -1.83
ERG9YHR190W YGL036WP53185 909 aaPredicted RBP3.59□□□□□ -1.83
ERG9YHR190W EFM5P53200 248 aaKnown RBP3.59□□□□□ -1.83
ERG9YHR190W CPR6P53691 371 aaKnown RBP3.59□□□□□ -1.83
ERG9YHR190W PNG1Q02890 363 aa3.59□□□□□ -1.83
ERG9YHR190W SCW10Q04951 389 aa3.59□□□□□ -1.83
ERG9YHR190W ATG38Q05789 226 aaKnown RBP3.59□□□□□ -1.83
ERG9YHR190W UTP21Q06078 939 aaPredicted RBP3.59□□□□□ -1.83
ERG9YHR190W TRM8Q12009 286 aa3.59□□□□□ -1.83
ERG9YHR190W BNI1P41832 1953 aa3.58□□□□□ -1.84
ERG9YHR190W MET17P06106 444 aa3.58□□□□□ -1.84
ERG9YHR190W MIS1P09440 975 aaKnown RBP3.58□□□□□ -1.84
ERG9YHR190W PET122P10355 254 aa3.58□□□□□ -1.84
ERG9YHR190W NCP1P16603 691 aaKnown RBP3.58□□□□□ -1.84
ERG9YHR190W URK1P27515 501 aa3.58□□□□□ -1.84
ERG9YHR190W MIC60P36112 540 aa3.58□□□□□ -1.84
ERG9YHR190W SPT8P38915 602 aa3.58□□□□□ -1.84
ERG9YHR190W YRB1P41920 201 aaKnown RBP3.58□□□□□ -1.84
ERG9YHR190W MSY1P48527 492 aa3.58□□□□□ -1.84
ERG9YHR190W OCA1P50946 238 aaPredicted RBP3.58□□□□□ -1.84
ERG9YHR190W SHE10P53075 577 aa3.58□□□□□ -1.84
ERG9YHR190W DCP2P53550 970 aaKnown RBP3.58□□□□□ -1.84
ERG9YHR190W DSL1P53847 754 aa3.58□□□□□ -1.84
ERG9YHR190W DIG1Q03063 452 aaKnown RBP3.58□□□□□ -1.84
ERG9YHR190W IZH1Q03419 316 aa3.58□□□□□ -1.84
ERG9YHR190W YMR317WQ04893 1140 aa3.58□□□□□ -1.84
ERG9YHR190W MFB1Q04922 465 aa3.58□□□□□ -1.84
ERG9YHR190W YTH1Q06102 208 aaPredicted RBP3.58□□□□□ -1.84
ERG9YHR190W IWR1Q07532 353 aaPredicted RBP3.58□□□□□ -1.84
ERG9YHR190W PGC1Q08959 321 aa3.58□□□□□ -1.84
ERG9YHR190W YLR112WQ12130 139 aa3.58□□□□□ -1.84
ERG9YHR190W SCM3Q12334 223 aa3.58□□□□□ -1.84
ERG9YHR190W RED1P14291 827 aa3.57□□□□□ -1.84
ERG9YHR190W POL3P15436 1097 aa3.57□□□□□ -1.84
ERG9YHR190W GLK1P17709 500 aaKnown RBP3.57□□□□□ -1.84
ERG9YHR190W TRX1P22217 103 aaKnown RBP3.57□□□□□ -1.84
ERG9YHR190W MNE1P24720 663 aa3.57□□□□□ -1.84
ERG9YHR190W RPC53P25441 422 aa3.57□□□□□ -1.84
ERG9YHR190W ZUO1P32527 433 aaKnown RBP3.57□□□□□ -1.84
ERG9YHR190W ESL2P36168 1195 aa3.57□□□□□ -1.84
ERG9YHR190W IFA38P38286 347 aa3.57□□□□□ -1.84
ERG9YHR190W LRP1P38801 184 aaKnown RBP3.57□□□□□ -1.84
ERG9YHR190W JEM1P40358 645 aa3.57□□□□□ -1.84
ERG9YHR190W PSP1P50896 841 aaKnown RBP3.57□□□□□ -1.84
ERG9YHR190W ERB1Q04660 807 aaKnown RBP3.57□□□□□ -1.84
ERG9YHR190W RRN11Q04712 507 aa3.57□□□□□ -1.84
ERG9YHR190W VID22Q05934 901 aa3.57□□□□□ -1.84
ERG9YHR190W RRP9Q06506 573 aaKnown RBP3.57□□□□□ -1.84
ERG9YHR190W FRE3Q08905 711 aa3.57□□□□□ -1.84
ERG9YHR190W SGS1P35187 1447 aa3.56□□□□□ -1.84
ERG9YHR190W RPB2P08518 1224 aaKnown RBP3.56□□□□□ -1.84
ERG9YHR190W CDC16P09798 840 aa3.56□□□□□ -1.84
ERG9YHR190W PFK2P16862 959 aaKnown RBP RIP-Chip data3.56□□□□□ -1.84not detected
ERG9YHR190W TPM1P17536 199 aaKnown RBP3.56□□□□□ -1.84
ERG9YHR190W RIT1P23796 513 aa3.56□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 8.2 ms