RNA–Protein interactions for RNA: YHR111W

UBA4, Transcript of E1-like protein that activates Urm1p before urmylation, yeastyeast

Gene UBA4, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBA4YHR111W EGD1Q02642 157 aaKnown RBP10.06□□□□□ -0.8
UBA4YHR111W ABF1P14164 731 aa10.05□□□□□ -0.8
UBA4YHR111W RIM1P32445 135 aaKnown RBP10.05□□□□□ -0.8
UBA4YHR111W GCD11P32481 527 aaKnown RBP10.05□□□□□ -0.8
UBA4YHR111W YME1P32795 747 aa10.05□□□□□ -0.8
UBA4YHR111W BEM3P32873 1128 aa10.05□□□□□ -0.8
UBA4YHR111W MRPL37P36532 105 aa10.05□□□□□ -0.8
UBA4YHR111W ETR1P38071 380 aa10.05□□□□□ -0.8
UBA4YHR111W CEM1P39525 442 aa10.05□□□□□ -0.8
UBA4YHR111W MIC19P43594 170 aa10.05□□□□□ -0.8
UBA4YHR111W YJR039WP47107 1121 aa10.05□□□□□ -0.8
UBA4YHR111W BUD32P53323 261 aa10.05□□□□□ -0.8
UBA4YHR111W ECM9Q02202 377 aa10.05□□□□□ -0.8
UBA4YHR111W GRS2Q06817 618 aa10.05□□□□□ -0.8
UBA4YHR111W YET3Q07451 203 aa10.05□□□□□ -0.8
UBA4YHR111W PFA4Q12006 378 aa10.05□□□□□ -0.8
UBA4YHR111W MRH1Q12117 320 aaPredicted RBP10.05□□□□□ -0.8
UBA4YHR111W NHA1Q99271 985 aa10.05□□□□□ -0.8
UBA4YHR111W SWI5P08153 709 aa10.04□□□□□ -0.8
UBA4YHR111W FUM1P08417 488 aaKnown RBP10.04□□□□□ -0.8
UBA4YHR111W MRPL25P23369 157 aa10.04□□□□□ -0.8
UBA4YHR111W CWP1P28319 239 aa10.04□□□□□ -0.8
UBA4YHR111W HRR25P29295 494 aaKnown RBP10.04□□□□□ -0.8
UBA4YHR111W THI80P35202 319 aa10.04□□□□□ -0.8
UBA4YHR111W YHR020WP38708 688 aaKnown RBP10.04□□□□□ -0.8
UBA4YHR111W UME6P39001 836 aa10.04□□□□□ -0.8
UBA4YHR111W GIM4P40005 111 aaKnown RBP10.04□□□□□ -0.8
UBA4YHR111W PRP31P49704 494 aaPredicted RBP10.04□□□□□ -0.8
UBA4YHR111W ADE12P80210 433 aaKnown RBP10.04□□□□□ -0.8
UBA4YHR111W HOS3Q02959 697 aaKnown RBP10.04□□□□□ -0.8
UBA4YHR111W SSL1Q04673 461 aaPredicted RBP10.04□□□□□ -0.8
UBA4YHR111W FRA1Q07825 749 aa10.04□□□□□ -0.8
UBA4YHR111W UPC2Q12151 913 aa10.04□□□□□ -0.8
UBA4YHR111W ICT1Q12385 394 aa10.04□□□□□ -0.8
UBA4YHR111W BRR2P32639 2163 aaKnown RBP10.04□□□□□ -0.8
UBA4YHR111W PHO5P00635 467 aa10.03□□□□□ -0.8
UBA4YHR111W SEC14P24280 304 aaKnown RBP10.03□□□□□ -0.8
UBA4YHR111W ATP11P32453 318 aa10.03□□□□□ -0.8
UBA4YHR111W NFU1P32860 256 aa10.03□□□□□ -0.8
UBA4YHR111W YPT52P36018 234 aaKnown RBP10.03□□□□□ -0.8
UBA4YHR111W YBR238CP38330 731 aaKnown RBP10.03□□□□□ -0.8
UBA4YHR111W LEU5P38702 357 aa10.03□□□□□ -0.8
UBA4YHR111W HSE1P38753 452 aa10.03□□□□□ -0.8
UBA4YHR111W SMX2P40204 77 aaKnown RBP10.03□□□□□ -0.8
UBA4YHR111W UTP18P40362 594 aaPredicted RBP10.03□□□□□ -0.8
UBA4YHR111W GAT1P43574 510 aa10.03□□□□□ -0.8
UBA4YHR111W BUD22Q04347 519 aaKnown RBP10.03□□□□□ -0.8
UBA4YHR111W HFA1P32874 2273 aa10.03□□□□□ -0.8
UBA4YHR111W GAL4P04386 881 aa10.02□□□□□ -0.81
UBA4YHR111W SEC53P07283 254 aaKnown RBP10.02□□□□□ -0.81
UBA4YHR111W YAR066WP0CX18 203 aa10.02□□□□□ -0.81
UBA4YHR111W YHR214WP0CX19 203 aa10.02□□□□□ -0.81
UBA4YHR111W ARA1P38115 344 aa10.02□□□□□ -0.81
UBA4YHR111W SEC28P40509 296 aaKnown RBP10.02□□□□□ -0.81
UBA4YHR111W BOL2P53082 120 aa10.02□□□□□ -0.81
UBA4YHR111W HST3P53687 447 aa10.02□□□□□ -0.81
UBA4YHR111W ROT1Q03691 256 aa10.02□□□□□ -0.81
UBA4YHR111W YMR030W-AQ3E760 96 aa10.02□□□□□ -0.81
UBA4YHR111W RNQ1P25367 405 aa10.01□□□□□ -0.81
UBA4YHR111W SPT16P32558 1035 aaKnown RBP10.01□□□□□ -0.81
UBA4YHR111W CYM1P32898 989 aa10.01□□□□□ -0.81
UBA4YHR111W DEF1P35732 738 aaKnown RBP10.01□□□□□ -0.81
UBA4YHR111W EFM1P38732 585 aa10.01□□□□□ -0.81
UBA4YHR111W YHR045WP38775 560 aa10.01□□□□□ -0.81
UBA4YHR111W UBA4P38820 440 aa10.01□□□□□ -0.81
UBA4YHR111W MPT5P39016 859 aaKnown RBP RIP-Chip data10.01□□□□□ -0.81not detected
UBA4YHR111W CCT2P39076 527 aaKnown RBP10.01□□□□□ -0.81
UBA4YHR111W SSP120P39931 234 aaKnown RBP10.01□□□□□ -0.81
UBA4YHR111W HOS4P40480 1083 aa10.01□□□□□ -0.81
UBA4YHR111W BNI4P53858 892 aa10.01□□□□□ -0.81
UBA4YHR111W TRM12Q04235 462 aa10.01□□□□□ -0.81
UBA4YHR111W YLR177WQ06251 628 aa10.01□□□□□ -0.81
UBA4YHR111W CRN1Q06440 651 aa10.01□□□□□ -0.81
UBA4YHR111W CUP1-1P0CX80 61 aa10□□□□□ -0.81
UBA4YHR111W CUP1-2P0CX81 61 aa10□□□□□ -0.81
UBA4YHR111W TRX2P22803 104 aaKnown RBP10□□□□□ -0.81
UBA4YHR111W SPC97P38863 823 aa10□□□□□ -0.81
UBA4YHR111W YHR182WP38870 785 aa10□□□□□ -0.81
UBA4YHR111W PFA3P42836 336 aa10□□□□□ -0.81
UBA4YHR111W UBX3Q12229 455 aa10□□□□□ -0.81
UBA4YHR111W GPR1Q12361 961 aa10□□□□□ -0.81
UBA4YHR111W SKM1Q12469 655 aa10□□□□□ -0.81
UBA4YHR111W HSH49Q99181 213 aaPredicted RBP10□□□□□ -0.81
UBA4YHR111W MDM35O60200 86 aa9.99□□□□□ -0.81
UBA4YHR111W ILV2P07342 687 aaKnown RBP9.99□□□□□ -0.81
UBA4YHR111W SSC1P0CS90 654 aaKnown RBP9.99□□□□□ -0.81
UBA4YHR111W TEC1P18412 486 aa9.99□□□□□ -0.81
UBA4YHR111W AMD2P22580 549 aa9.99□□□□□ -0.81
UBA4YHR111W WBP1P33767 430 aaKnown RBP9.99□□□□□ -0.81
UBA4YHR111W NTR2P36118 322 aaPredicted RBP9.99□□□□□ -0.81
UBA4YHR111W TRM7P38238 310 aaKnown RBP9.99□□□□□ -0.81
UBA4YHR111W MUP3P38734 546 aa9.99□□□□□ -0.81
UBA4YHR111W MEP1P40260 492 aa9.99□□□□□ -0.81
UBA4YHR111W URB2P47108 1174 aa9.99□□□□□ -0.81
UBA4YHR111W RHO3Q00245 231 aaKnown RBP9.99□□□□□ -0.81
UBA4YHR111W STP3Q05937 343 aa9.99□□□□□ -0.81
UBA4YHR111W UTP13Q05946 817 aaKnown RBP9.99□□□□□ -0.81
UBA4YHR111W YDR262WQ12331 272 aa9.99□□□□□ -0.81
UBA4YHR111W KCS1Q12494 1050 aa9.99□□□□□ -0.81
UBA4YHR111W RGS2Q99188 309 aa9.99□□□□□ -0.81
Retrieved 100 of 5,963 RNA–protein pairs in 18.5 ms