RNA–Protein interactions for RNA: YHR012W

VPS29, Transcript of Subunit of the membrane-associated retromer complex, yeastyeast

Gene VPS29, Length 849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS29YHR012W SQT1P35184 431 aa4.81□□□□□ -1.64
VPS29YHR012W RPF2P36160 344 aaKnown RBP4.81□□□□□ -1.64
VPS29YHR012W MRP21P38175 177 aa4.81□□□□□ -1.64
VPS29YHR012W TRM7P38238 310 aaKnown RBP4.81□□□□□ -1.64
VPS29YHR012W YSW1P38280 609 aa4.81□□□□□ -1.64
VPS29YHR012W YHR045WP38775 560 aa4.81□□□□□ -1.64
VPS29YHR012W GIC1P38785 314 aa4.81□□□□□ -1.64
VPS29YHR012W MTG2P38860 518 aa4.81□□□□□ -1.64
VPS29YHR012W END3P39013 349 aa4.81□□□□□ -1.64
VPS29YHR012W SSN3P39073 555 aa4.81□□□□□ -1.64
VPS29YHR012W YEL073CP39974 107 aa4.81□□□□□ -1.64
VPS29YHR012W LSM5P40089 93 aaKnown RBP4.81□□□□□ -1.64
VPS29YHR012W CFD1P40558 293 aa4.81□□□□□ -1.64
VPS29YHR012W GTS1P40956 396 aa4.81□□□□□ -1.64
VPS29YHR012W HXT16P47185 567 aa4.81□□□□□ -1.64
VPS29YHR012W ASK10P48361 1146 aa4.81□□□□□ -1.64
VPS29YHR012W GND2P53319 492 aa4.81□□□□□ -1.64
VPS29YHR012W FRE4P53746 719 aa4.81□□□□□ -1.64
VPS29YHR012W HXT15P54854 567 aa4.81□□□□□ -1.64
VPS29YHR012W PET117Q02771 107 aa4.81□□□□□ -1.64
VPS29YHR012W TRS31Q03337 283 aa4.81□□□□□ -1.64
VPS29YHR012W YMR265CQ03508 461 aaKnown RBP4.81□□□□□ -1.64
VPS29YHR012W RPN9Q04062 393 aaKnown RBP4.81□□□□□ -1.64
VPS29YHR012W STP3Q05937 343 aa4.81□□□□□ -1.64
VPS29YHR012W SYT1Q06836 1226 aa4.81□□□□□ -1.64
VPS29YHR012W YLR030WQ07967 263 aa4.81□□□□□ -1.64
VPS29YHR012W YOL024WQ08172 172 aa4.81□□□□□ -1.64
VPS29YHR012W DIN7Q12086 430 aa4.81□□□□□ -1.64
VPS29YHR012W ZRT2Q12436 422 aa4.81□□□□□ -1.64
VPS29YHR012W CMR1Q12510 522 aaKnown RBP4.81□□□□□ -1.64
VPS29YHR012W RRP12Q12754 1228 aaKnown RBP4.81□□□□□ -1.64
VPS29YHR012W HSH49Q99181 213 aaPredicted RBP4.81□□□□□ -1.64
VPS29YHR012W RAD10P06838 210 aa4.8□□□□□ -1.64
VPS29YHR012W ERR1P0CX10 437 aa4.8□□□□□ -1.64
VPS29YHR012W ERR2P0CX11 437 aa4.8□□□□□ -1.64
VPS29YHR012W DIT1P21623 536 aa4.8□□□□□ -1.64
VPS29YHR012W SEC15P22224 910 aa4.8□□□□□ -1.64
VPS29YHR012W TSR4P25040 408 aa4.8□□□□□ -1.64
VPS29YHR012W SMI1P32566 505 aa4.8□□□□□ -1.64
VPS29YHR012W GDA1P32621 518 aa4.8□□□□□ -1.64
VPS29YHR012W SRP101P32916 621 aa4.8□□□□□ -1.64
VPS29YHR012W TOM20P35180 183 aa4.8□□□□□ -1.64
VPS29YHR012W YPT52P36018 234 aaKnown RBP4.8□□□□□ -1.64
VPS29YHR012W YBP1P38315 674 aa4.8□□□□□ -1.64
VPS29YHR012W LYS1P38998 373 aaRIP-Chip data4.8□□□□□ -1.64not detected
VPS29YHR012W CAJ1P39101 391 aa4.8□□□□□ -1.64
VPS29YHR012W SCC4P40090 624 aa4.8□□□□□ -1.64
VPS29YHR012W EFM4P40516 257 aa4.8□□□□□ -1.64
VPS29YHR012W ERR3P42222 437 aa4.8□□□□□ -1.64
VPS29YHR012W OSW7P43611 510 aa4.8□□□□□ -1.64
VPS29YHR012W ALK1P43633 760 aaKnown RBP4.8□□□□□ -1.64
VPS29YHR012W ALY2P47029 1046 aa4.8□□□□□ -1.64
VPS29YHR012W PEX8P53248 589 aa4.8□□□□□ -1.64
VPS29YHR012W ARP4P80428 489 aa4.8□□□□□ -1.64
VPS29YHR012W HOS3Q02959 697 aaKnown RBP4.8□□□□□ -1.64
VPS29YHR012W DIG1Q03063 452 aaKnown RBP4.8□□□□□ -1.64
VPS29YHR012W YMR114CQ04471 368 aaKnown RBP4.8□□□□□ -1.64
VPS29YHR012W RSF1Q05043 376 aa4.8□□□□□ -1.64
VPS29YHR012W APL4Q12028 832 aa4.8□□□□□ -1.64
VPS29YHR012W LEU9Q12166 604 aaKnown RBP4.8□□□□□ -1.64
VPS29YHR012W LAG2Q92325 660 aa4.8□□□□□ -1.64
VPS29YHR012W YLR149CQ99296 730 aa4.8□□□□□ -1.64
VPS29YHR012W SWI5P08153 709 aa4.79□□□□□ -1.64
VPS29YHR012W IMA3P0CW40 589 aa4.79□□□□□ -1.64
VPS29YHR012W IMA4P0CW41 589 aa4.79□□□□□ -1.64
VPS29YHR012W CDC24P11433 854 aaPredicted RBP4.79□□□□□ -1.64
VPS29YHR012W PDC5P16467 563 aaKnown RBP4.79□□□□□ -1.64
VPS29YHR012W HOP1P20050 605 aa4.79□□□□□ -1.64
VPS29YHR012W VPS34P22543 875 aa4.79□□□□□ -1.64
VPS29YHR012W YSR3P23501 404 aa4.79□□□□□ -1.64
VPS29YHR012W CLB1P24868 471 aa4.79□□□□□ -1.64
VPS29YHR012W RNQ1P25367 405 aa4.79□□□□□ -1.64
VPS29YHR012W YCL068CP25593 260 aa4.79□□□□□ -1.64
VPS29YHR012W GUT2P32191 649 aa4.79□□□□□ -1.64
VPS29YHR012W MF(ALPHA)2P32435 120 aa4.79□□□□□ -1.64
VPS29YHR012W SKN1P33336 771 aa4.79□□□□□ -1.64
VPS29YHR012W SKT5P34226 696 aa4.79□□□□□ -1.64
VPS29YHR012W POP4P38336 279 aa4.79□□□□□ -1.64
VPS29YHR012W RPC17P47076 161 aa4.79□□□□□ -1.64
VPS29YHR012W TAH11P47112 604 aa4.79□□□□□ -1.64
VPS29YHR012W PMT3P47190 753 aa4.79□□□□□ -1.64
VPS29YHR012W PRO2P54885 456 aaKnown RBP4.79□□□□□ -1.64
VPS29YHR012W OSH6Q02201 448 aa4.79□□□□□ -1.64
VPS29YHR012W YDR278CQ05612 105 aa4.79□□□□□ -1.64
VPS29YHR012W IMA2Q08295 589 aa4.79□□□□□ -1.64
VPS29YHR012W GUP2Q08929 609 aa4.79□□□□□ -1.64
VPS29YHR012W AIM41Q12032 185 aa4.79□□□□□ -1.64
VPS29YHR012W MCD1Q12158 566 aa4.79□□□□□ -1.64
VPS29YHR012W FRE7Q12333 620 aa4.79□□□□□ -1.64
VPS29YHR012W BRR1Q99177 341 aaPredicted RBP4.79□□□□□ -1.64
VPS29YHR012W STO1P34160 861 aaKnown RBP4.78□□□□□ -1.64
VPS29YHR012W RIM11P38615 370 aa4.78□□□□□ -1.64
VPS29YHR012W GND1P38720 489 aaKnown RBP4.78□□□□□ -1.64
VPS29YHR012W YHR182WP38870 785 aa4.78□□□□□ -1.64
VPS29YHR012W TIM17P39515 158 aa4.78□□□□□ -1.64
VPS29YHR012W SEO1P39709 593 aa4.78□□□□□ -1.64
VPS29YHR012W DLD3P39976 496 aaKnown RBP4.78□□□□□ -1.64
VPS29YHR012W MEP1P40260 492 aa4.78□□□□□ -1.64
VPS29YHR012W LRO1P40345 661 aa4.78□□□□□ -1.64
VPS29YHR012W PET130P47065 347 aa4.78□□□□□ -1.64
Retrieved 100 of 5,963 RNA–protein pairs in 11.8 ms