RNA–Protein interactions for RNA: YER008C

SEC3, Transcript of Subunit of the exocyst complex, yeastyeast

Gene SEC3, Length 4,011 nt, Biotype protein coding, Subcellular localisation Cellular bud .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC3YER008C ATP2P00830 511 aaKnown RBP1.34□□□□□ -2.2
SEC3YER008C PMS1P14242 873 aa1.34□□□□□ -2.2
SEC3YER008C CLB1P24868 471 aa1.34□□□□□ -2.2
SEC3YER008C TSA1P34760 196 aaKnown RBP1.34□□□□□ -2.2
SEC3YER008C PIL1P53252 339 aaKnown RBP1.34□□□□□ -2.2
SEC3YER008C ATG4P53867 494 aa1.34□□□□□ -2.2
SEC3YER008C TLG1Q03322 224 aa1.34□□□□□ -2.2
SEC3YER008C ROY1Q04847 553 aa1.34□□□□□ -2.2
SEC3YER008C YDR341CQ05506 607 aaKnown RBP1.34□□□□□ -2.2
SEC3YER008C RRP9Q06506 573 aaKnown RBP1.34□□□□□ -2.2
SEC3YER008C YDL073WQ07454 984 aa1.34□□□□□ -2.2
SEC3YER008C HUA2Q12134 243 aa1.34□□□□□ -2.2
SEC3YER008C GRX6Q12438 231 aa1.34□□□□□ -2.2
SEC3YER008C RRP36Q12481 300 aaPredicted RBP1.34□□□□□ -2.2
SEC3YER008C ADE6P38972 1358 aaKnown RBP1.34□□□□□ -2.2
SEC3YER008C RAV1P47104 1357 aa1.34□□□□□ -2.2
SEC3YER008C SES1P07284 462 aaKnown RBP1.33□□□□□ -2.2
SEC3YER008C KGD1P20967 1014 aaKnown RBP1.33□□□□□ -2.2
SEC3YER008C RFA2P26754 273 aaKnown RBP1.33□□□□□ -2.2
SEC3YER008C RIB7P33312 244 aa1.33□□□□□ -2.2
SEC3YER008C OAR1P35731 278 aa1.33□□□□□ -2.2
SEC3YER008C DEF1P35732 738 aaKnown RBP1.33□□□□□ -2.2
SEC3YER008C APE3P37302 537 aaKnown RBP1.33□□□□□ -2.2
SEC3YER008C YBR053CP38235 358 aa1.33□□□□□ -2.2
SEC3YER008C RRF1P38771 230 aa1.33□□□□□ -2.2
SEC3YER008C ECM1P39715 212 aa1.33□□□□□ -2.2
SEC3YER008C SEC28P40509 296 aaKnown RBP1.33□□□□□ -2.2
SEC3YER008C GSM1P42950 618 aa1.33□□□□□ -2.2
SEC3YER008C PUS4P48567 403 aaKnown RBP1.33□□□□□ -2.2
SEC3YER008C TIM11P81449 96 aaPredicted RBP1.33□□□□□ -2.2
SEC3YER008C PEX25Q02969 394 aa1.33□□□□□ -2.2
SEC3YER008C FDC1Q03034 503 aa1.33□□□□□ -2.2
SEC3YER008C GTB1Q04924 702 aa1.33□□□□□ -2.2
SEC3YER008C CRF1Q04930 467 aa1.33□□□□□ -2.2
SEC3YER008C RBS1Q05672 457 aaKnown RBP1.33□□□□□ -2.2
SEC3YER008C SPH1Q06160 661 aa1.33□□□□□ -2.2
SEC3YER008C AAD4Q07747 329 aa1.33□□□□□ -2.2
SEC3YER008C YOR012WQ12351 137 aa1.33□□□□□ -2.2
SEC3YER008C ADE5,7P07244 802 aaKnown RBP1.33□□□□□ -2.2
SEC3YER008C PRE8P23639 250 aa1.33□□□□□ -2.2
SEC3YER008C YCR015CP25616 317 aa1.33□□□□□ -2.2
SEC3YER008C XRS2P33301 854 aa1.33□□□□□ -2.2
SEC3YER008C LOT5P34234 306 aa1.33□□□□□ -2.2
SEC3YER008C KKQ8P36004 724 aa1.33□□□□□ -2.2
SEC3YER008C KEL1P38853 1164 aaKnown RBP1.33□□□□□ -2.2
SEC3YER008C SER3P40054 469 aa1.33□□□□□ -2.2
SEC3YER008C COS12P53053 380 aa1.33□□□□□ -2.2
SEC3YER008C CUL3P53202 744 aa1.33□□□□□ -2.2
SEC3YER008C YDR179W-AQ03983 463 aa1.33□□□□□ -2.2
SEC3YER008C THI22Q06490 572 aa1.33□□□□□ -2.2
SEC3YER008C AFI1Q99222 893 aa1.33□□□□□ -2.2
SEC3YER008C RPB2P08518 1224 aaKnown RBP1.33□□□□□ -2.2
SEC3YER008C LPD1P09624 499 aaKnown RBP1.33□□□□□ -2.2
SEC3YER008C ERG11P10614 530 aa1.33□□□□□ -2.2
SEC3YER008C RPL3P14126 387 aaKnown RBP1.33□□□□□ -2.2
SEC3YER008C PPH22P23595 377 aa1.33□□□□□ -2.2
SEC3YER008C MSS51P32335 436 aa1.33□□□□□ -2.2
SEC3YER008C YME1P32795 747 aa1.33□□□□□ -2.2
SEC3YER008C PMT1P33775 817 aa1.33□□□□□ -2.2
SEC3YER008C PTK1P36002 662 aaPredicted RBP1.33□□□□□ -2.2
SEC3YER008C CTP1P38152 299 aa1.33□□□□□ -2.2
SEC3YER008C FTH1P38310 465 aa1.33□□□□□ -2.2
SEC3YER008C ARO9P38840 513 aaPredicted RBP1.33□□□□□ -2.2
SEC3YER008C HRB1P38922 454 aaKnown RBP RIP-Chip data1.33□□□□□ -2.2not detected
SEC3YER008C SMF1P38925 575 aa1.33□□□□□ -2.2
SEC3YER008C TIF4631P39935 952 aaKnown RBP1.33□□□□□ -2.2
SEC3YER008C GDI1P39958 451 aaKnown RBP1.33□□□□□ -2.2
SEC3YER008C YIL161WP40449 235 aaKnown RBP1.33□□□□□ -2.2
SEC3YER008C SEC24P40482 926 aaKnown RBP1.33□□□□□ -2.2
SEC3YER008C RPS7BP48164 190 aaKnown RBP1.33□□□□□ -2.2
SEC3YER008C YGR054WP53235 642 aaKnown RBP1.33□□□□□ -2.2
SEC3YER008C NNF2P53253 936 aa1.33□□□□□ -2.2
SEC3YER008C PAP2P53632 584 aaKnown RBP1.33□□□□□ -2.2
SEC3YER008C RHO5P53879 331 aaKnown RBP1.33□□□□□ -2.2
SEC3YER008C TRS31Q03337 283 aa1.33□□□□□ -2.2
SEC3YER008C SWA2Q06677 668 aa1.33□□□□□ -2.2
SEC3YER008C YER175W-AQ8TGU4 54 aa1.33□□□□□ -2.2
SEC3YER008C GAL80P04387 435 aa1.32□□□□□ -2.2
SEC3YER008C SEC53P07283 254 aaKnown RBP1.32□□□□□ -2.2
SEC3YER008C ARO3P14843 370 aaKnown RBP1.32□□□□□ -2.2
SEC3YER008C SAT4P25333 603 aaKnown RBP1.32□□□□□ -2.2
SEC3YER008C DCG1P32460 244 aa1.32□□□□□ -2.2
SEC3YER008C UBP11P36026 717 aa1.32□□□□□ -2.2
SEC3YER008C YSW1P38280 609 aa1.32□□□□□ -2.2
SEC3YER008C MRX1P40050 688 aa1.32□□□□□ -2.2
SEC3YER008C YML6P51998 286 aa1.32□□□□□ -2.2
SEC3YER008C COG2P53271 262 aa1.32□□□□□ -2.2
SEC3YER008C TOF1P53840 1238 aa1.32□□□□□ -2.2
SEC3YER008C YML119WQ03208 357 aa1.32□□□□□ -2.2
SEC3YER008C ECM22Q05958 814 aaPredicted RBP1.32□□□□□ -2.2
SEC3YER008C RIX7Q07844 837 aaKnown RBP1.32□□□□□ -2.2
SEC3YER008C ERG27Q12452 347 aaKnown RBP1.32□□□□□ -2.2
SEC3YER008C AVL9Q12500 764 aa1.32□□□□□ -2.2
SEC3YER008C TUF1P02992 437 aaKnown RBP1.32□□□□□ -2.2
SEC3YER008C GCN4P03069 281 aa1.32□□□□□ -2.2
SEC3YER008C URA7P28274 579 aaKnown RBP1.32□□□□□ -2.2
SEC3YER008C MGM1P32266 881 aa1.32□□□□□ -2.2
SEC3YER008C THI80P35202 319 aa1.32□□□□□ -2.2
SEC3YER008C ASN1P49089 572 aaKnown RBP1.32□□□□□ -2.2
SEC3YER008C WAR1Q03631 944 aa1.32□□□□□ -2.2
Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms