RNA–Protein interactions for RNA: YDR498C

SEC20, Transcript of Membrane glycoprotein v-SNARE, yeastyeast

Gene SEC20, Length 1,152 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC20YDR498C YIL161WP40449 235 aaKnown RBP5.71□□□□□ -1.5
SEC20YDR498C SEC28P40509 296 aaKnown RBP5.71□□□□□ -1.5
SEC20YDR498C GAT1P43574 510 aa5.71□□□□□ -1.5
SEC20YDR498C RSC8P43609 557 aaKnown RBP5.71□□□□□ -1.5
SEC20YDR498C BOL2P53082 120 aa5.71□□□□□ -1.5
SEC20YDR498C ERP6P53198 216 aa5.71□□□□□ -1.5
SEC20YDR498C COG2P53271 262 aa5.71□□□□□ -1.5
SEC20YDR498C VAC7P53950 1165 aa5.71□□□□□ -1.5
SEC20YDR498C PRO2P54885 456 aaKnown RBP5.71□□□□□ -1.5
SEC20YDR498C YPL014WQ02606 381 aa5.71□□□□□ -1.5
SEC20YDR498C ISU1Q03020 165 aa5.71□□□□□ -1.5
SEC20YDR498C YMR206WQ03695 313 aa5.71□□□□□ -1.5
SEC20YDR498C TAF12Q03761 539 aa5.71□□□□□ -1.5
SEC20YDR498C BLS1Q06071 122 aa5.71□□□□□ -1.5
SEC20YDR498C RIF2Q06208 395 aa5.71□□□□□ -1.5
SEC20YDR498C LDB18Q07887 179 aa5.71□□□□□ -1.5
SEC20YDR498C IRC10Q08118 586 aa5.71□□□□□ -1.5
SEC20YDR498C GPB1Q08886 897 aa5.71□□□□□ -1.5
SEC20YDR498C PHO5P00635 467 aa5.7□□□□□ -1.5
SEC20YDR498C ARD1P07347 238 aaPredicted RBP5.7□□□□□ -1.5
SEC20YDR498C RNA1P11745 407 aaKnown RBP5.7□□□□□ -1.5
SEC20YDR498C REV1P12689 985 aa5.7□□□□□ -1.5
SEC20YDR498C MTF1P14908 341 aaKnown RBP5.7□□□□□ -1.5
SEC20YDR498C VPS34P22543 875 aa5.7□□□□□ -1.5
SEC20YDR498C YCR090CP25654 182 aaKnown RBP5.7□□□□□ -1.5
SEC20YDR498C GAR1P28007 205 aaKnown RBP5.7□□□□□ -1.5
SEC20YDR498C DPH5P32469 300 aaPredicted RBP5.7□□□□□ -1.5
SEC20YDR498C STE14P32584 239 aa5.7□□□□□ -1.5
SEC20YDR498C SWE1P32944 819 aa5.7□□□□□ -1.5
SEC20YDR498C WHI3P34761 661 aaKnown RBP5.7□□□□□ -1.5
SEC20YDR498C THI80P35202 319 aa5.7□□□□□ -1.5
SEC20YDR498C HES1P35843 434 aa5.7□□□□□ -1.5
SEC20YDR498C ADD66P36040 267 aa5.7□□□□□ -1.5
SEC20YDR498C LDB7P38210 180 aa5.7□□□□□ -1.5
SEC20YDR498C ARP1P38696 384 aa5.7□□□□□ -1.5
SEC20YDR498C BZZ1P38822 633 aa5.7□□□□□ -1.5
SEC20YDR498C GTS1P40956 396 aa5.7□□□□□ -1.5
SEC20YDR498C AAD14P42884 376 aa5.7□□□□□ -1.5
SEC20YDR498C ILM1P47155 203 aa5.7□□□□□ -1.5
SEC20YDR498C PSP1P50896 841 aaKnown RBP5.7□□□□□ -1.5
SEC20YDR498C NUP84P52891 726 aa5.7□□□□□ -1.5
SEC20YDR498C TEL2P53038 688 aa5.7□□□□□ -1.5
SEC20YDR498C VEL1P53058 206 aa5.7□□□□□ -1.5
SEC20YDR498C NMA2P53204 395 aa5.7□□□□□ -1.5
SEC20YDR498C COP1P53622 1201 aaKnown RBP5.7□□□□□ -1.5
SEC20YDR498C FRE4P53746 719 aa5.7□□□□□ -1.5
SEC20YDR498C SLM2P53955 656 aa5.7□□□□□ -1.5
SEC20YDR498C REX2P54964 269 aaKnown RBP5.7□□□□□ -1.5
SEC20YDR498C LSM3P57743 89 aaKnown RBP5.7□□□□□ -1.5
SEC20YDR498C RPN9Q04062 393 aaKnown RBP5.7□□□□□ -1.5
SEC20YDR498C SPO20Q04359 397 aa5.7□□□□□ -1.5
SEC20YDR498C RCO1Q04779 684 aa5.7□□□□□ -1.5
SEC20YDR498C YLR257WQ06146 321 aaKnown RBP5.7□□□□□ -1.5
SEC20YDR498C MCP2Q06567 569 aa5.7□□□□□ -1.5
SEC20YDR498C MEU1Q07938 337 aaKnown RBP RIP-Chip data5.7□□□□□ -1.5not detected
SEC20YDR498C YKL018C-AQ3E7A7 99 aa5.7□□□□□ -1.5
SEC20YDR498C LEU1P07264 779 aaKnown RBP5.69□□□□□ -1.5
SEC20YDR498C SCH9P11792 824 aaKnown RBP5.69□□□□□ -1.5
SEC20YDR498C ABF1P14164 731 aa5.69□□□□□ -1.5
SEC20YDR498C YAK1P14680 807 aa5.69□□□□□ -1.5
SEC20YDR498C SEC63P14906 663 aa5.69□□□□□ -1.5
SEC20YDR498C ARF2P19146 181 aaKnown RBP5.69□□□□□ -1.5
SEC20YDR498C SGE1P33335 543 aa5.69□□□□□ -1.5
SEC20YDR498C TOM20P35180 183 aa5.69□□□□□ -1.5
SEC20YDR498C AST1P35183 429 aa5.69□□□□□ -1.5
SEC20YDR498C MAC1P35192 417 aa5.69□□□□□ -1.5
SEC20YDR498C KTR4P38131 464 aa5.69□□□□□ -1.5
SEC20YDR498C ACO2P39533 789 aa5.69□□□□□ -1.5
SEC20YDR498C FRT2P39734 528 aa5.69□□□□□ -1.5
SEC20YDR498C RGI2P40188 164 aa5.69□□□□□ -1.5
SEC20YDR498C BFA1P47113 574 aa5.69□□□□□ -1.5
SEC20YDR498C CUS2P53830 285 aaPredicted RBP5.69□□□□□ -1.5
SEC20YDR498C IBD2P53892 351 aa5.69□□□□□ -1.5
SEC20YDR498C YDR444WQ04093 687 aa5.69□□□□□ -1.5
SEC20YDR498C YDR109CQ04585 715 aa5.69□□□□□ -1.5
SEC20YDR498C MRX10Q05648 414 aa5.69□□□□□ -1.5
SEC20YDR498C SEC10Q06245 871 aa5.69□□□□□ -1.5
SEC20YDR498C MCH5Q08777 521 aa5.69□□□□□ -1.5
SEC20YDR498C PER33Q12144 273 aa5.69□□□□□ -1.5
SEC20YDR498C CMR1Q12510 522 aaKnown RBP5.69□□□□□ -1.5
SEC20YDR498C TUB1P09733 447 aaKnown RBP5.68□□□□□ -1.5
SEC20YDR498C STE6P12866 1290 aa5.68□□□□□ -1.5
SEC20YDR498C GUK1P15454 187 aaKnown RBP5.68□□□□□ -1.5
SEC20YDR498C RDS2P19541 446 aaKnown RBP5.68□□□□□ -1.5
SEC20YDR498C DAL81P21657 970 aa5.68□□□□□ -1.5
SEC20YDR498C SIR1P21691 654 aa5.68□□□□□ -1.5
SEC20YDR498C MIH1P23748 554 aa5.68□□□□□ -1.5
SEC20YDR498C BUB2P26448 306 aaPredicted RBP5.68□□□□□ -1.5
SEC20YDR498C SIN4P32259 974 aa5.68□□□□□ -1.5
SEC20YDR498C SFP1P32432 683 aa5.68□□□□□ -1.5
SEC20YDR498C TFA2P36145 328 aa5.68□□□□□ -1.5
SEC20YDR498C MRPL40P36534 297 aa5.68□□□□□ -1.5
SEC20YDR498C PDX3P38075 228 aaKnown RBP5.68□□□□□ -1.5
SEC20YDR498C YBL029WP38201 376 aa5.68□□□□□ -1.5
SEC20YDR498C ARN1P38731 627 aa5.68□□□□□ -1.5
SEC20YDR498C MPT5P39016 859 aaKnown RBP RIP-Chip data5.68□□□□□ -1.5not detected
SEC20YDR498C EXO1P39875 702 aa5.68□□□□□ -1.5
SEC20YDR498C HEM14P40012 539 aa5.68□□□□□ -1.5
SEC20YDR498C ALG8P40351 577 aa5.68□□□□□ -1.5
SEC20YDR498C UBP7P40453 1071 aa5.68□□□□□ -1.5
Retrieved 100 of 5,963 RNA–protein pairs in 16.9 ms