RNA–Protein interactions for RNA: YDR254W

CHL4, Transcript of Outer kinetochore protein required for chromosome stability, yeast

Gene CHL4, Length 1,377 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CHL4	YDR254W	PET117	Q02771	107 aa		5.93	□□□□□ -1.46
CHL4	YDR254W	MUB1	Q03162	620 aa		5.93	□□□□□ -1.46
CHL4	YDR254W	FUS2	Q05670	677 aa		5.93	□□□□□ -1.46
CHL4	YDR254W	CUR1	Q06469	252 aa		5.93	□□□□□ -1.46
CHL4	YDR254W	RSB1	Q08417	382 aa		5.93	□□□□□ -1.46
CHL4	YDR254W	YDR061W	Q12298	539 aa		5.93	□□□□□ -1.46
CHL4	YDR254W	VPS63	O13549	108 aa		5.92	□□□□□ -1.46
CHL4	YDR254W	SOD2	P00447	233 aa		5.92	□□□□□ -1.46
CHL4	YDR254W	HEM1	P09950	548 aa	Predicted RBP	5.92	□□□□□ -1.46
CHL4	YDR254W	SEN2	P16658	377 aa		5.92	□□□□□ -1.46
CHL4	YDR254W	GID7	P25569	745 aa		5.92	□□□□□ -1.46
CHL4	YDR254W	GDH2	P33327	1092 aa	Known RBP	5.92	□□□□□ -1.46
CHL4	YDR254W	YBL055C	P34220	418 aa	Predicted RBP	5.92	□□□□□ -1.46
CHL4	YDR254W	RRT2	P38332	387 aa		5.92	□□□□□ -1.46
CHL4	YDR254W	YTA12	P40341	825 aa		5.92	□□□□□ -1.46
CHL4	YDR254W	RLP7	P40693	322 aa	Known RBP	5.92	□□□□□ -1.46
CHL4	YDR254W	ELP2	P42935	788 aa		5.92	□□□□□ -1.46
CHL4	YDR254W	MIG2	P53035	382 aa		5.92	□□□□□ -1.46
CHL4	YDR254W	RHO5	P53879	331 aa	Known RBP	5.92	□□□□□ -1.46
CHL4	YDR254W	NOP15	P53927	220 aa	Predicted RBP	5.92	□□□□□ -1.46
CHL4	YDR254W	HEF3	P53978	1044 aa	Known RBP	5.92	□□□□□ -1.46
CHL4	YDR254W	CLU1	Q03690	1277 aa	Known RBP	5.92	□□□□□ -1.46
CHL4	YDR254W	RTT103	Q05543	409 aa		5.92	□□□□□ -1.46
CHL4	YDR254W	THI22	Q06490	572 aa		5.92	□□□□□ -1.46
CHL4	YDR254W	GPB1	Q08886	897 aa		5.92	□□□□□ -1.46
CHL4	YDR254W	YOL107W	Q12239	342 aa		5.92	□□□□□ -1.46
CHL4	YDR254W	RAP1	P11938	827 aa		5.91	□□□□□ -1.46
CHL4	YDR254W	FAR1	P21268	830 aa		5.91	□□□□□ -1.46
CHL4	YDR254W	SEC15	P22224	910 aa		5.91	□□□□□ -1.46
CHL4	YDR254W	MCM4	P30665	933 aa	Known RBP	5.91	□□□□□ -1.46
CHL4	YDR254W	HXT1	P32465	570 aa		5.91	□□□□□ -1.46
CHL4	YDR254W	TOD6	P34219	525 aa		5.91	□□□□□ -1.46
CHL4	YDR254W	YKR075C	P36155	307 aa		5.91	□□□□□ -1.46
CHL4	YDR254W	NUP133	P36161	1157 aa		5.91	□□□□□ -1.46
CHL4	YDR254W	CST26	P38226	397 aa		5.91	□□□□□ -1.46
CHL4	YDR254W	SCC4	P40090	624 aa		5.91	□□□□□ -1.46
CHL4	YDR254W	SHQ1	P40486	507 aa	Predicted RBP	5.91	□□□□□ -1.46
CHL4	YDR254W	DOT5	P40553	215 aa		5.91	□□□□□ -1.46
CHL4	YDR254W	IST3	P40565	148 aa	Predicted RBP	5.91	□□□□□ -1.46
CHL4	YDR254W	BST1	P43571	1029 aa		5.91	□□□□□ -1.46
CHL4	YDR254W	NET1	P47035	1189 aa		5.91	□□□□□ -1.46
CHL4	YDR254W	MRK1	P50873	501 aa		5.91	□□□□□ -1.46
CHL4	YDR254W	RMR1	P53060	241 aa		5.91	□□□□□ -1.46
CHL4	YDR254W	PNC1	P53184	216 aa	Known RBP	5.91	□□□□□ -1.46
CHL4	YDR254W	YGR117C	P53270	476 aa		5.91	□□□□□ -1.46
CHL4	YDR254W	YNL134C	P53912	376 aa	Known RBP	5.91	□□□□□ -1.46
CHL4	YDR254W	KAP120	Q02932	1032 aa		5.91	□□□□□ -1.46
CHL4	YDR254W	SOV1	Q04748	898 aa		5.91	□□□□□ -1.46
CHL4	YDR254W	IVY1	Q04934	453 aa		5.91	□□□□□ -1.46
CHL4	YDR254W	FMP40	Q08968	688 aa	Predicted RBP	5.91	□□□□□ -1.46
CHL4	YDR254W	LYS21	Q12122	440 aa	Known RBP	5.91	□□□□□ -1.46
CHL4	YDR254W	DIF1	O13577	133 aa		5.9	□□□□□ -1.47
CHL4	YDR254W	PCK1	P10963	549 aa		5.9	□□□□□ -1.47
CHL4	YDR254W	CAF20	P12962	161 aa	Known RBP	5.9	□□□□□ -1.47
CHL4	YDR254W	SAM35	P14693	329 aa		5.9	□□□□□ -1.47
CHL4	YDR254W	IMG2	P25642	146 aa	Predicted RBP	5.9	□□□□□ -1.47
CHL4	YDR254W	ARP2	P32381	391 aa	Known RBP	5.9	□□□□□ -1.47
CHL4	YDR254W	PRS1	P32895	427 aa	Known RBP	5.9	□□□□□ -1.47
CHL4	YDR254W	YKL070W	P36087	169 aa		5.9	□□□□□ -1.47
CHL4	YDR254W	ADE17	P38009	592 aa	Known RBP	5.9	□□□□□ -1.47
CHL4	YDR254W	YHL012W	P38709	493 aa		5.9	□□□□□ -1.47
CHL4	YDR254W	PRM9	P39551	298 aa		5.9	□□□□□ -1.47
CHL4	YDR254W	YER085C	P40058	173 aa		5.9	□□□□□ -1.47
CHL4	YDR254W	MNT2	P53059	558 aa		5.9	□□□□□ -1.47
CHL4	YDR254W	COG1	P53079	417 aa		5.9	□□□□□ -1.47
CHL4	YDR254W	RPA49	Q01080	415 aa	Predicted RBP	5.9	□□□□□ -1.47
CHL4	YDR254W	TRI1	Q05024	226 aa		5.9	□□□□□ -1.47
CHL4	YDR254W	AAD4	Q07747	329 aa		5.9	□□□□□ -1.47
CHL4	YDR254W	YPL260W	Q08977	551 aa		5.9	□□□□□ -1.47
CHL4	YDR254W	YJR112W-A	Q3E743	109 aa		5.9	□□□□□ -1.47
CHL4	YDR254W	SRN2	Q99176	213 aa		5.9	□□□□□ -1.47
CHL4	YDR254W	DFR1	P07807	211 aa	Known RBP RIP-Chip data	5.89	□□□□□ -1.47	not detected
CHL4	YDR254W	SNF5	P18480	905 aa		5.89	□□□□□ -1.47
CHL4	YDR254W	YSC84	P32793	468 aa		5.89	□□□□□ -1.47
CHL4	YDR254W	YPT52	P36018	234 aa	Known RBP	5.89	□□□□□ -1.47
CHL4	YDR254W	TAE1	P38340	232 aa		5.89	□□□□□ -1.47
CHL4	YDR254W	SSZ1	P38788	538 aa	Known RBP	5.89	□□□□□ -1.47
CHL4	YDR254W	OTU1	P43558	301 aa		5.89	□□□□□ -1.47
CHL4	YDR254W	GCD14	P46959	383 aa	Predicted RBP	5.89	□□□□□ -1.47
CHL4	YDR254W	EFM3	P47163	339 aa		5.89	□□□□□ -1.47
CHL4	YDR254W	APT1	P49435	187 aa	Known RBP	5.89	□□□□□ -1.47
CHL4	YDR254W	RMD9	P53140	646 aa	Known RBP	5.89	□□□□□ -1.47
CHL4	YDR254W	TIM21	P53220	239 aa		5.89	□□□□□ -1.47
CHL4	YDR254W	YNR071C	P53757	342 aa		5.89	□□□□□ -1.47
CHL4	YDR254W	SNO2	P53823	222 aa		5.89	□□□□□ -1.47
CHL4	YDR254W	GIM5	Q04493	163 aa		5.89	□□□□□ -1.47
CHL4	YDR254W	TLG2	Q08144	397 aa		5.89	□□□□□ -1.47
CHL4	YDR254W	UAF30	Q08747	228 aa		5.89	□□□□□ -1.47
CHL4	YDR254W	CFT1	Q06632	1357 aa	Known RBP	5.88	□□□□□ -1.47
CHL4	YDR254W	YLR278C	Q05854	1341 aa		5.88	□□□□□ -1.47
CHL4	YDR254W	YPR089W	O13585	888 aa		5.88	□□□□□ -1.47
CHL4	YDR254W	RPS13	P05756	151 aa	Known RBP	5.88	□□□□□ -1.47
CHL4	YDR254W	TPK2	P06245	380 aa		5.88	□□□□□ -1.47
CHL4	YDR254W	SSA3	P09435	649 aa	Known RBP	5.88	□□□□□ -1.47
CHL4	YDR254W	LPD1	P09624	499 aa	Known RBP	5.88	□□□□□ -1.47
CHL4	YDR254W	RPL11A	P0C0W9	174 aa	Known RBP	5.88	□□□□□ -1.47
CHL4	YDR254W	PRP16	P15938	1071 aa	Predicted RBP	5.88	□□□□□ -1.47
CHL4	YDR254W	GEX1	P25596	615 aa		5.88	□□□□□ -1.47
CHL4	YDR254W	SYN8	P31377	255 aa		5.88	□□□□□ -1.47
CHL4	YDR254W	ERC1	P38767	581 aa		5.88	□□□□□ -1.47

Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms