RNA–Protein interactions for RNA: YDR146C

SWI5, Transcript of Transcription factor that recruits Mediator and Swi/Snf complexes, yeastyeast

Gene SWI5, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI5YDR146C SAN1P22470 610 aa1.9□□□□□ -2.11
SWI5YDR146C KTR3P38130 404 aaPredicted RBP1.9□□□□□ -2.11
SWI5YDR146C RFC1P38630 861 aaKnown RBP1.9□□□□□ -2.11
SWI5YDR146C UBA4P38820 440 aa1.9□□□□□ -2.11
SWI5YDR146C YEL068CP39977 110 aa1.9□□□□□ -2.11
SWI5YDR146C YIL060WP40519 144 aa1.9□□□□□ -2.11
SWI5YDR146C PYK2P52489 506 aaKnown RBP1.9□□□□□ -2.11
SWI5YDR146C SEC5P89102 971 aa1.9□□□□□ -2.11
SWI5YDR146C BET4Q00618 327 aa1.9□□□□□ -2.11
SWI5YDR146C MSC1Q03104 513 aa1.9□□□□□ -2.11
SWI5YDR146C NGL3Q03210 505 aa1.9□□□□□ -2.11
SWI5YDR146C TMA64Q04600 565 aaKnown RBP1.9□□□□□ -2.11
SWI5YDR146C UTP21Q06078 939 aaPredicted RBP1.9□□□□□ -2.11
SWI5YDR146C ATG26Q06321 1198 aa1.9□□□□□ -2.11
SWI5YDR146C ETT1Q08421 412 aaKnown RBP1.9□□□□□ -2.11
SWI5YDR146C BUD21Q08492 214 aaPredicted RBP1.9□□□□□ -2.11
SWI5YDR146C NMD4Q12129 218 aa1.9□□□□□ -2.11
SWI5YDR146C PUF2Q12221 1075 aaKnown RBP RIP-Chip data1.9□□□□□ -2.11 RIP-Chip
SWI5YDR146C SKM1Q12469 655 aa1.9□□□□□ -2.11
SWI5YDR146C AAC3P18238 307 aa1.89□□□□□ -2.11
SWI5YDR146C OLE1P21147 510 aaKnown RBP1.89□□□□□ -2.11
SWI5YDR146C YCR043CP25361 127 aa1.89□□□□□ -2.11
SWI5YDR146C ADH7P25377 361 aa1.89□□□□□ -2.11
SWI5YDR146C YKL050CP35736 922 aa1.89□□□□□ -2.11
SWI5YDR146C YIR016WP40572 265 aa1.89□□□□□ -2.11
SWI5YDR146C LYS14P40971 790 aa1.89□□□□□ -2.11
SWI5YDR146C TES1P41903 349 aaKnown RBP1.89□□□□□ -2.11
SWI5YDR146C FET5P43561 622 aa1.89□□□□□ -2.11
SWI5YDR146C DUO1P53168 247 aaKnown RBP1.89□□□□□ -2.11
SWI5YDR146C YNL181WP53878 407 aa1.89□□□□□ -2.11
SWI5YDR146C EFM6P53970 246 aa1.89□□□□□ -2.11
SWI5YDR146C NUP100Q02629 959 aa1.89□□□□□ -2.11
SWI5YDR146C CTL1Q03220 320 aaKnown RBP1.89□□□□□ -2.11
SWI5YDR146C EKI1Q03764 534 aa1.89□□□□□ -2.11
SWI5YDR146C YMR034CQ05131 434 aaPredicted RBP1.89□□□□□ -2.11
SWI5YDR146C MCP2Q06567 569 aa1.89□□□□□ -2.11
SWI5YDR146C RRI2Q12348 645 aa1.89□□□□□ -2.11
SWI5YDR146C YOR111WQ99210 232 aa1.89□□□□□ -2.11
SWI5YDR146C CBP1P07252 654 aa1.88□□□□□ -2.11
SWI5YDR146C PUT2P07275 575 aa1.88□□□□□ -2.11
SWI5YDR146C ARD1P07347 238 aaPredicted RBP1.88□□□□□ -2.11
SWI5YDR146C KGD1P20967 1014 aaKnown RBP1.88□□□□□ -2.11
SWI5YDR146C YCK1P23291 538 aa1.88□□□□□ -2.11
SWI5YDR146C PUP3P25451 205 aaKnown RBP1.88□□□□□ -2.11
SWI5YDR146C SPC34P36131 295 aa1.88□□□□□ -2.11
SWI5YDR146C NUP133P36161 1157 aa1.88□□□□□ -2.11
SWI5YDR146C YPK3P38070 525 aa1.88□□□□□ -2.11
SWI5YDR146C SCO2P38072 301 aa1.88□□□□□ -2.11
SWI5YDR146C MAL33P38157 468 aa1.88□□□□□ -2.11
SWI5YDR146C RTS1P38903 757 aa1.88□□□□□ -2.11
SWI5YDR146C FLC2P39719 783 aa1.88□□□□□ -2.11
SWI5YDR146C YND1P40009 630 aa1.88□□□□□ -2.11
SWI5YDR146C RTS2P40962 232 aa1.88□□□□□ -2.11
SWI5YDR146C DIA3P52290 468 aa1.88□□□□□ -2.11
SWI5YDR146C NNF2P53253 936 aa1.88□□□□□ -2.11
SWI5YDR146C BOP3P53958 396 aa1.88□□□□□ -2.11
SWI5YDR146C YMR254CQ04838 102 aa1.88□□□□□ -2.11
SWI5YDR146C NOP58Q12499 511 aaKnown RBP1.88□□□□□ -2.11
SWI5YDR146C CDC23P16522 626 aa1.88□□□□□ -2.11
SWI5YDR146C SGV1P23293 657 aaKnown RBP1.88□□□□□ -2.11
SWI5YDR146C GID7P25569 745 aa1.88□□□□□ -2.11
SWI5YDR146C AUR1P36107 401 aaPredicted RBP1.88□□□□□ -2.11
SWI5YDR146C ANS1P38832 159 aa1.88□□□□□ -2.11
SWI5YDR146C BUR6P40096 142 aa1.88□□□□□ -2.11
SWI5YDR146C GUF1P46943 645 aa1.88□□□□□ -2.11
SWI5YDR146C NUP53Q03790 475 aa1.88□□□□□ -2.11
SWI5YDR146C RSF1Q05043 376 aa1.88□□□□□ -2.11
SWI5YDR146C SNA4Q07549 140 aa1.88□□□□□ -2.11
SWI5YDR146C YDL218WQ07629 317 aa1.88□□□□□ -2.11
SWI5YDR146C APL4Q12028 832 aa1.88□□□□□ -2.11
SWI5YDR146C LEU9Q12166 604 aaKnown RBP1.88□□□□□ -2.11
SWI5YDR146C MET8P15807 274 aa1.87□□□□□ -2.11
SWI5YDR146C VMA16P23968 213 aa1.87□□□□□ -2.11
SWI5YDR146C BUD5P25300 642 aaPredicted RBP1.87□□□□□ -2.11
SWI5YDR146C RPS2P25443 254 aaKnown RBP1.87□□□□□ -2.11
SWI5YDR146C SGF29P25554 259 aa1.87□□□□□ -2.11
SWI5YDR146C PDR3P33200 976 aa1.87□□□□□ -2.11
SWI5YDR146C YBL055CP34220 418 aaPredicted RBP1.87□□□□□ -2.11
SWI5YDR146C MTR2P34232 184 aaKnown RBP1.87□□□□□ -2.11
SWI5YDR146C AGP2P38090 596 aa1.87□□□□□ -2.11
SWI5YDR146C YER130CP39959 443 aa1.87□□□□□ -2.11
SWI5YDR146C RGI2P40188 164 aa1.87□□□□□ -2.11
SWI5YDR146C IAH1P41734 238 aa1.87□□□□□ -2.11
SWI5YDR146C ERG26P53199 349 aaKnown RBP1.87□□□□□ -2.11
SWI5YDR146C DRN1P53255 507 aaKnown RBP1.87□□□□□ -2.11
SWI5YDR146C SOL4P53315 255 aa1.87□□□□□ -2.11
SWI5YDR146C ARE2P53629 642 aaKnown RBP1.87□□□□□ -2.11
SWI5YDR146C YML037CQ03703 340 aa1.87□□□□□ -2.11
SWI5YDR146C RPC11Q04307 110 aaPredicted RBP1.87□□□□□ -2.11
SWI5YDR146C TDA9Q04545 1251 aa1.87□□□□□ -2.11
SWI5YDR146C SDH5Q08230 162 aa1.87□□□□□ -2.11
SWI5YDR146C BUD7Q08754 746 aa1.87□□□□□ -2.11
SWI5YDR146C TCO89Q08921 799 aa1.87□□□□□ -2.11
SWI5YDR146C BSC1Q12140 328 aa1.87□□□□□ -2.11
SWI5YDR146C NCE102Q12207 173 aaRIP-Chip data1.87□□□□□ -2.11not detected
SWI5YDR146C YBR126W-AQ8TGU7 68 aa1.87□□□□□ -2.11
SWI5YDR146C HSC82P15108 705 aaKnown RBP1.87□□□□□ -2.11
SWI5YDR146C LCB1P25045 558 aaKnown RBP1.87□□□□□ -2.11
SWI5YDR146C MGR1P25573 417 aa1.87□□□□□ -2.11
SWI5YDR146C POL4P25615 582 aa1.87□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 18.7 ms