RNA–Protein interactions for RNA: YDR118W

APC4, Transcript of Subunit of the Anaphase-Promoting Complex/Cyclosome (APC/C), yeast

Gene APC4, Length 1,959 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APC4	YDR118W	SHU2	P38957	223 aa		4.62	□□□□□ -1.67
APC4	YDR118W	SEC31	P38968	1273 aa	Known RBP	4.62	□□□□□ -1.67
APC4	YDR118W	RSP5	P39940	809 aa	Known RBP	4.62	□□□□□ -1.67
APC4	YDR118W	PRM2	P40534	656 aa		4.62	□□□□□ -1.67
APC4	YDR118W	GYP8	P43570	497 aa		4.62	□□□□□ -1.67
APC4	YDR118W	EMC4	P53073	190 aa		4.62	□□□□□ -1.67
APC4	YDR118W	FLC3	P53121	802 aa		4.62	□□□□□ -1.67
APC4	YDR118W	GTR1	Q00582	310 aa		4.62	□□□□□ -1.67
APC4	YDR118W	FMN1	Q03778	218 aa		4.62	□□□□□ -1.67
APC4	YDR118W	SPO20	Q04359	397 aa		4.62	□□□□□ -1.67
APC4	YDR118W	SPC24	Q04477	213 aa		4.62	□□□□□ -1.67
APC4	YDR118W	BLS1	Q06071	122 aa		4.62	□□□□□ -1.67
APC4	YDR118W	LCB5	Q06147	687 aa	Known RBP	4.62	□□□□□ -1.67
APC4	YDR118W	ALR1	Q08269	859 aa		4.62	□□□□□ -1.67
APC4	YDR118W	FLC1	Q08967	793 aa		4.62	□□□□□ -1.67
APC4	YDR118W	MRH1	Q12117	320 aa	Predicted RBP	4.62	□□□□□ -1.67
APC4	YDR118W	TMA17	Q12513	150 aa		4.62	□□□□□ -1.67
APC4	YDR118W	RNA1	P11745	407 aa	Known RBP	4.61	□□□□□ -1.67
APC4	YDR118W	NMT1	P14743	455 aa		4.61	□□□□□ -1.67
APC4	YDR118W	EXO70	P19658	623 aa		4.61	□□□□□ -1.67
APC4	YDR118W	BET2	P20133	325 aa		4.61	□□□□□ -1.67
APC4	YDR118W	SEC15	P22224	910 aa		4.61	□□□□□ -1.67
APC4	YDR118W	YCR090C	P25654	182 aa	Known RBP	4.61	□□□□□ -1.67
APC4	YDR118W	MRPL9	P31334	269 aa		4.61	□□□□□ -1.67
APC4	YDR118W	PDB1	P32473	366 aa	Known RBP	4.61	□□□□□ -1.67
APC4	YDR118W	STE13	P33894	931 aa		4.61	□□□□□ -1.67
APC4	YDR118W	TFC3	P34111	1160 aa		4.61	□□□□□ -1.67
APC4	YDR118W	DCW1	P36091	449 aa		4.61	□□□□□ -1.67
APC4	YDR118W	CTP1	P38152	299 aa		4.61	□□□□□ -1.67
APC4	YDR118W	YBR259W	P38338	688 aa		4.61	□□□□□ -1.67
APC4	YDR118W	STN1	P38960	494 aa		4.61	□□□□□ -1.67
APC4	YDR118W	YIR007W	P40566	764 aa		4.61	□□□□□ -1.67
APC4	YDR118W	GTS1	P40956	396 aa		4.61	□□□□□ -1.67
APC4	YDR118W	PET130	P47065	347 aa		4.61	□□□□□ -1.67
APC4	YDR118W	IMP4	P53941	290 aa	Known RBP	4.61	□□□□□ -1.67
APC4	YDR118W	SFB2	P53953	876 aa		4.61	□□□□□ -1.67
APC4	YDR118W	OSH6	Q02201	448 aa		4.61	□□□□□ -1.67
APC4	YDR118W	YVH1	Q02256	364 aa	Known RBP	4.61	□□□□□ -1.67
APC4	YDR118W	YPL109C	Q02981	657 aa		4.61	□□□□□ -1.67
APC4	YDR118W	NHP10	Q03435	203 aa		4.61	□□□□□ -1.67
APC4	YDR118W	TAF12	Q03761	539 aa		4.61	□□□□□ -1.67
APC4	YDR118W	OPI10	Q08202	246 aa		4.61	□□□□□ -1.67
APC4	YDR118W	ICT1	Q12385	394 aa		4.61	□□□□□ -1.67
APC4	YDR118W	MPH2	P0CD99	609 aa		4.6	□□□□□ -1.67
APC4	YDR118W	SBP1	P10080	294 aa	Known RBP	4.6	□□□□□ -1.67
APC4	YDR118W	SEC63	P14906	663 aa		4.6	□□□□□ -1.67
APC4	YDR118W	MLS1	P30952	554 aa		4.6	□□□□□ -1.67
APC4	YDR118W	PTM1	P32857	523 aa		4.6	□□□□□ -1.67
APC4	YDR118W	PTH2	P34222	208 aa		4.6	□□□□□ -1.67
APC4	YDR118W	EAP1	P36041	632 aa	Known RBP	4.6	□□□□□ -1.67
APC4	YDR118W	STB6	P36085	766 aa		4.6	□□□□□ -1.67
APC4	YDR118W	EFM1	P38732	585 aa		4.6	□□□□□ -1.67
APC4	YDR118W	NEM1	P38757	446 aa		4.6	□□□□□ -1.67
APC4	YDR118W	BZZ1	P38822	633 aa		4.6	□□□□□ -1.67
APC4	YDR118W	YHB1	P39676	399 aa	Known RBP	4.6	□□□□□ -1.67
APC4	YDR118W	IME4	P41833	600 aa		4.6	□□□□□ -1.67
APC4	YDR118W	RMD8	P43620	662 aa		4.6	□□□□□ -1.67
APC4	YDR118W	RPS0B	P46654	252 aa	Known RBP	4.6	□□□□□ -1.67
APC4	YDR118W	GCD14	P46959	383 aa	Predicted RBP	4.6	□□□□□ -1.67
APC4	YDR118W	GLG2	P47011	380 aa		4.6	□□□□□ -1.67
APC4	YDR118W	NNF2	P53253	936 aa		4.6	□□□□□ -1.67
APC4	YDR118W	FRE4	P53746	719 aa		4.6	□□□□□ -1.67
APC4	YDR118W	TGL2	P54857	326 aa		4.6	□□□□□ -1.67
APC4	YDR118W	LSM3	P57743	89 aa	Known RBP	4.6	□□□□□ -1.67
APC4	YDR118W	UBP2	Q01476	1272 aa		4.6	□□□□□ -1.67
APC4	YDR118W	RMI1	Q02685	241 aa		4.6	□□□□□ -1.67
APC4	YDR118W	GOT1	Q03554	138 aa		4.6	□□□□□ -1.67
APC4	YDR118W	PPN1	Q04119	674 aa		4.6	□□□□□ -1.67
APC4	YDR118W	TGL5	Q12043	749 aa		4.6	□□□□□ -1.67
APC4	YDR118W	UPC2	Q12151	913 aa		4.6	□□□□□ -1.67
APC4	YDR118W	ERP4	Q12450	207 aa		4.6	□□□□□ -1.67
APC4	YDR118W	YPL247C	Q12523	523 aa		4.6	□□□□□ -1.67
APC4	YDR118W	YOR338W	Q99326	363 aa		4.6	□□□□□ -1.67
APC4	YDR118W	HEM2	P05373	342 aa		4.6	□□□□□ -1.67
APC4	YDR118W	TEC1	P18412	486 aa		4.6	□□□□□ -1.67
APC4	YDR118W	IMG2	P25642	146 aa	Predicted RBP	4.6	□□□□□ -1.67
APC4	YDR118W	BRF1	P29056	596 aa		4.6	□□□□□ -1.67
APC4	YDR118W	SFP1	P32432	683 aa		4.6	□□□□□ -1.67
APC4	YDR118W	SSE1	P32589	693 aa	Known RBP	4.6	□□□□□ -1.67
APC4	YDR118W	YKL097C	P34245	136 aa		4.6	□□□□□ -1.67
APC4	YDR118W	YBR197C	P38306	217 aa		4.6	□□□□□ -1.67
APC4	YDR118W	LRP1	P38801	184 aa	Known RBP	4.6	□□□□□ -1.67
APC4	YDR118W	UTP9	P38882	575 aa	Known RBP	4.6	□□□□□ -1.67
APC4	YDR118W	TIM17	P39515	158 aa		4.6	□□□□□ -1.67
APC4	YDR118W	FRT2	P39734	528 aa		4.6	□□□□□ -1.67
APC4	YDR118W	IRR1	P40541	1150 aa		4.6	□□□□□ -1.67
APC4	YDR118W	VMA13	P41807	478 aa	Known RBP	4.6	□□□□□ -1.67
APC4	YDR118W	USE1	P53146	245 aa		4.6	□□□□□ -1.67
APC4	YDR118W	YGR053C	P53234	283 aa		4.6	□□□□□ -1.67
APC4	YDR118W	NAN1	Q02931	896 aa	Known RBP	4.6	□□□□□ -1.67
APC4	YDR118W	YMR178W	Q03219	274 aa	Known RBP	4.6	□□□□□ -1.67
APC4	YDR118W	RCO1	Q04779	684 aa		4.6	□□□□□ -1.67
APC4	YDR118W	GTB1	Q04924	702 aa		4.6	□□□□□ -1.67
APC4	YDR118W	VTA1	Q06263	330 aa		4.6	□□□□□ -1.67
APC4	YDR118W	HDA3	Q06623	655 aa		4.6	□□□□□ -1.67
APC4	YDR118W	IRC10	Q08118	586 aa		4.6	□□□□□ -1.67
APC4	YDR118W	YOL019W	Q08157	551 aa		4.6	□□□□□ -1.67
APC4	YDR118W	NTG2	Q08214	380 aa		4.6	□□□□□ -1.67
APC4	YDR118W	OSW1	Q08692	278 aa		4.6	□□□□□ -1.67
APC4	YDR118W	RPS14A	P06367	137 aa	Known RBP	4.59	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 11 ms