RNA–Protein interactions for RNA: YDR077W

SED1, Transcript of Major stress-induced structural GPI-cell wall glycoprotein, yeastyeast

Gene SED1, Length 1,017 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SED1YDR077W IMP4P53941 290 aaKnown RBP9.44□□□□□ -0.9
SED1YDR077W ARP4P80428 489 aa9.44□□□□□ -0.9
SED1YDR077W RCO1Q04779 684 aa9.44□□□□□ -0.9
SED1YDR077W CIA1Q05583 330 aa9.44□□□□□ -0.9
SED1YDR077W RSB1Q08417 382 aa9.44□□□□□ -0.9
SED1YDR077W AHA1Q12449 350 aaKnown RBP9.44□□□□□ -0.9
SED1YDR077W ART10P18634 518 aaKnown RBP9.43□□□□□ -0.9
SED1YDR077W REC107P21651 314 aa9.43□□□□□ -0.9
SED1YDR077W DGR2P32330 852 aa9.43□□□□□ -0.9
SED1YDR077W TSC10P38342 320 aa9.43□□□□□ -0.9
SED1YDR077W ARN1P38731 627 aa9.43□□□□□ -0.9
SED1YDR077W LRP1P38801 184 aaKnown RBP9.43□□□□□ -0.9
SED1YDR077W TIF11P38912 153 aaKnown RBP9.43□□□□□ -0.9
SED1YDR077W RPH1P39956 796 aa9.43□□□□□ -0.9
SED1YDR077W SCS2P40075 244 aaKnown RBP9.43□□□□□ -0.9
SED1YDR077W IRR1P40541 1150 aa9.43□□□□□ -0.9
SED1YDR077W YIR007WP40566 764 aa9.43□□□□□ -0.9
SED1YDR077W GTR2P53290 341 aa9.43□□□□□ -0.9
SED1YDR077W YNL010WP53981 241 aaKnown RBP9.43□□□□□ -0.9
SED1YDR077W YMR178WQ03219 274 aaKnown RBP9.43□□□□□ -0.9
SED1YDR077W YDR476CQ03362 224 aa9.43□□□□□ -0.9
SED1YDR077W YDL121CQ07541 149 aa9.43□□□□□ -0.9
SED1YDR077W IRC10Q08118 586 aa9.43□□□□□ -0.9
SED1YDR077W BUD7Q08754 746 aa9.43□□□□□ -0.9
SED1YDR077W PER33Q12144 273 aa9.43□□□□□ -0.9
SED1YDR077W MCD1Q12158 566 aa9.43□□□□□ -0.9
SED1YDR077W GTT2Q12390 233 aa9.43□□□□□ -0.9
SED1YDR077W UBA1P22515 1024 aaKnown RBP9.42□□□□□ -0.9
SED1YDR077W VPS34P22543 875 aa9.42□□□□□ -0.9
SED1YDR077W MRPL9P31334 269 aa9.42□□□□□ -0.9
SED1YDR077W PRP18P33411 251 aaPredicted RBP9.42□□□□□ -0.9
SED1YDR077W TIP20P33891 701 aa9.42□□□□□ -0.9
SED1YDR077W YKL100CP34248 587 aa9.42□□□□□ -0.9
SED1YDR077W PHO11P35842 467 aa9.42□□□□□ -0.9
SED1YDR077W PHO12P38693 467 aa9.42□□□□□ -0.9
SED1YDR077W ARP1P38696 384 aa9.42□□□□□ -0.9
SED1YDR077W TRM5P38793 499 aa9.42□□□□□ -0.9
SED1YDR077W DHH1P39517 506 aaKnown RBP9.42□□□□□ -0.9
SED1YDR077W MEP1P40260 492 aa9.42□□□□□ -0.9
SED1YDR077W GLG2P47011 380 aa9.42□□□□□ -0.9
SED1YDR077W EMC4P53073 190 aa9.42□□□□□ -0.9
SED1YDR077W SHY1P53266 389 aa9.42□□□□□ -0.9
SED1YDR077W NPL3Q01560 414 aaKnown RBP RIP-Chip data9.42□□□□□ -0.9not detected
SED1YDR077W YML131WQ03102 365 aa9.42□□□□□ -0.9
SED1YDR077W YHM2Q04013 314 aa9.42□□□□□ -0.9
SED1YDR077W BCP1Q06338 283 aa9.42□□□□□ -0.9
SED1YDR077W YPR202WQ08993 238 aa9.42□□□□□ -0.9
SED1YDR077W HSH49Q99181 213 aaPredicted RBP9.42□□□□□ -0.9
SED1YDR077W APA1P16550 321 aaKnown RBP9.41□□□□□ -0.9
SED1YDR077W GFD2P25370 566 aaKnown RBP9.41□□□□□ -0.9
SED1YDR077W SPS22P25380 463 aa9.41□□□□□ -0.9
SED1YDR077W YJU3P28321 313 aa9.41□□□□□ -0.9
SED1YDR077W BRF1P29056 596 aa9.41□□□□□ -0.9
SED1YDR077W STE5P32917 917 aa9.41□□□□□ -0.9
SED1YDR077W NEM1P38757 446 aa9.41□□□□□ -0.9
SED1YDR077W YHR045WP38775 560 aa9.41□□□□□ -0.9
SED1YDR077W YJR154WP47181 346 aa9.41□□□□□ -0.9
SED1YDR077W REX2P54964 269 aaKnown RBP9.41□□□□□ -0.9
SED1YDR077W PEX13P80667 386 aa9.41□□□□□ -0.9
SED1YDR077W YET2Q04210 160 aa9.41□□□□□ -0.9
SED1YDR077W HEL2Q05580 639 aaKnown RBP9.41□□□□□ -0.9
SED1YDR077W RIF2Q06208 395 aa9.41□□□□□ -0.9
SED1YDR077W VAM6Q07468 1049 aa9.41□□□□□ -0.9
SED1YDR077W ESA1Q08649 445 aa9.41□□□□□ -0.9
SED1YDR077W GPN2Q08726 347 aaPredicted RBP9.41□□□□□ -0.9
SED1YDR077W SNX3Q08826 162 aaKnown RBP9.41□□□□□ -0.9
SED1YDR077W YIG1Q08956 461 aa9.41□□□□□ -0.9
SED1YDR077W UPC2Q12151 913 aa9.41□□□□□ -0.9
SED1YDR077W YOR012WQ12351 137 aa9.41□□□□□ -0.9
SED1YDR077W CMR1Q12510 522 aaKnown RBP9.41□□□□□ -0.9
SED1YDR077W TRP3P00937 484 aa9.4□□□□□ -0.9
SED1YDR077W SGF29P25554 259 aa9.4□□□□□ -0.9
SED1YDR077W BUB2P26448 306 aaPredicted RBP9.4□□□□□ -0.9
SED1YDR077W SPS19P32573 292 aaKnown RBP9.4□□□□□ -0.9
SED1YDR077W COX13P32799 129 aa9.4□□□□□ -0.9
SED1YDR077W IRS4P36115 615 aaKnown RBP9.4□□□□□ -0.9
SED1YDR077W JEM1P40358 645 aa9.4□□□□□ -0.9
SED1YDR077W COG2P53271 262 aa9.4□□□□□ -0.9
SED1YDR077W FRE4P53746 719 aa9.4□□□□□ -0.9
SED1YDR077W SSL1Q04673 461 aaPredicted RBP9.4□□□□□ -0.9
SED1YDR077W FAR10Q06001 478 aa9.4□□□□□ -0.9
SED1YDR077W RSR1P13856 272 aa9.39□□□□□ -0.91
SED1YDR077W SEC63P14906 663 aa9.39□□□□□ -0.91
SED1YDR077W SFP1P32432 683 aa9.39□□□□□ -0.91
SED1YDR077W DBP8P38719 431 aa9.39□□□□□ -0.91
SED1YDR077W PCL5P38794 229 aa9.39□□□□□ -0.91
SED1YDR077W MPT5P39016 859 aaKnown RBP RIP-Chip data9.39□□□□□ -0.91not detected
SED1YDR077W NNF1P47149 201 aa9.39□□□□□ -0.91
SED1YDR077W SWC4P53201 476 aa9.39□□□□□ -0.91
SED1YDR077W ARC35P53731 342 aaKnown RBP9.39□□□□□ -0.91
SED1YDR077W SFB2P53953 876 aa9.39□□□□□ -0.91
SED1YDR077W CCE1Q03702 353 aa9.39□□□□□ -0.91
SED1YDR077W HBT1Q07653 1046 aaKnown RBP9.39□□□□□ -0.91
SED1YDR077W YLR049CQ12110 428 aa9.39□□□□□ -0.91
SED1YDR077W SAS5Q99314 248 aa9.39□□□□□ -0.91
SED1YDR077W COS2P0CX12 379 aa9.38□□□□□ -0.91
SED1YDR077W COS3P0CX13 379 aa9.38□□□□□ -0.91
SED1YDR077W PDC5P16467 563 aaKnown RBP9.38□□□□□ -0.91
SED1YDR077W BET2P20133 325 aa9.38□□□□□ -0.91
SED1YDR077W DBR1P24309 405 aaKnown RBP9.38□□□□□ -0.91
Retrieved 100 of 5,963 RNA–protein pairs in 19.5 ms