RNA–Protein interactions for RNA: YDL042C

SIR2, Transcript of Conserved NAD+ dependent histone deacetylase of the Sirtuin family, yeast

Gene SIR2, Length 1,689 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SIR2	YDL042C	KAR3	P17119	729 aa		6.04	□□□□□ -1.44
SIR2	YDL042C	SGF29	P25554	259 aa		6.04	□□□□□ -1.44
SIR2	YDL042C	AGP2	P38090	596 aa		6.04	□□□□□ -1.44
SIR2	YDL042C	TPA1	P40032	644 aa	Known RBP	6.04	□□□□□ -1.44
SIR2	YDL042C	PKP1	P40530	394 aa		6.04	□□□□□ -1.44
SIR2	YDL042C	LYS4	P49367	693 aa	Predicted RBP	6.04	□□□□□ -1.44
SIR2	YDL042C	PIG1	Q06216	648 aa		6.04	□□□□□ -1.44
SIR2	YDL042C	TSR2	Q06672	205 aa	Known RBP	6.04	□□□□□ -1.44
SIR2	YDL042C	NMD4	Q12129	218 aa		6.04	□□□□□ -1.44
SIR2	YDL042C	RAP1	P11938	827 aa		6.03	□□□□□ -1.44
SIR2	YDL042C	PWP1	P21304	576 aa	Known RBP	6.03	□□□□□ -1.44
SIR2	YDL042C	TKL1	P23254	680 aa	Known RBP	6.03	□□□□□ -1.44
SIR2	YDL042C	VMA16	P23968	213 aa		6.03	□□□□□ -1.44
SIR2	YDL042C	ERG13	P54839	491 aa	Known RBP	6.03	□□□□□ -1.44
SIR2	YDL042C	MDM1	Q01846	1127 aa		6.03	□□□□□ -1.44
SIR2	YDL042C	NGL3	Q03210	505 aa		6.03	□□□□□ -1.44
SIR2	YDL042C	ATG9	Q12142	997 aa		6.03	□□□□□ -1.44
SIR2	YDL042C	INP53	Q12271	1107 aa		6.03	□□□□□ -1.44
SIR2	YDL042C	INH1	P01097	85 aa		6.02	□□□□□ -1.45
SIR2	YDL042C	OLE1	P21147	510 aa	Known RBP	6.02	□□□□□ -1.45
SIR2	YDL042C	POL4	P25615	582 aa		6.02	□□□□□ -1.45
SIR2	YDL042C	DIA4	P38705	446 aa	Predicted RBP	6.02	□□□□□ -1.45
SIR2	YDL042C	UIP3	P39547	235 aa		6.02	□□□□□ -1.45
SIR2	YDL042C	FLC2	P39719	783 aa		6.02	□□□□□ -1.45
SIR2	YDL042C	RPS7B	P48164	190 aa	Known RBP	6.02	□□□□□ -1.45
SIR2	YDL042C	PXL1	P36166	706 aa		6.01	□□□□□ -1.45
SIR2	YDL042C	NNF2	P53253	936 aa		6.01	□□□□□ -1.45
SIR2	YDL042C	RBG2	P53295	368 aa	Known RBP	6.01	□□□□□ -1.45
SIR2	YDL042C	ARP9	Q05123	467 aa		6.01	□□□□□ -1.45
SIR2	YDL042C	STH1	P32597	1359 aa		6.01	□□□□□ -1.45
SIR2	YDL042C	CMK1	P27466	446 aa	Known RBP	6.01	□□□□□ -1.45
SIR2	YDL042C	ESL1	P40456	1118 aa		6.01	□□□□□ -1.45
SIR2	YDL042C	XBP1	P40489	647 aa		6.01	□□□□□ -1.45
SIR2	YDL042C	DSD1	P53095	428 aa		6.01	□□□□□ -1.45
SIR2	YDL042C	YML037C	Q03703	340 aa		6.01	□□□□□ -1.45
SIR2	YDL042C	GAL4	P04386	881 aa		6	□□□□□ -1.45
SIR2	YDL042C	MRP7	P12687	371 aa		6	□□□□□ -1.45
SIR2	YDL042C	SAC1	P32368	623 aa	Known RBP	6	□□□□□ -1.45
SIR2	YDL042C	YBR225W	P38321	900 aa		6	□□□□□ -1.45
SIR2	YDL042C	ULP2	P40537	1034 aa	Predicted RBP	6	□□□□□ -1.45
SIR2	YDL042C	SMC3	P47037	1230 aa		6	□□□□□ -1.45
SIR2	YDL042C	UBP8	P50102	471 aa		6	□□□□□ -1.45
SIR2	YDL042C	STR3	P53101	465 aa	Known RBP	6	□□□□□ -1.45
SIR2	YDL042C	LCL3	P53153	274 aa		6	□□□□□ -1.45
SIR2	YDL042C	ARE2	P53629	642 aa	Known RBP	6	□□□□□ -1.45
SIR2	YDL042C	CIR2	Q08822	631 aa		6	□□□□□ -1.45
SIR2	YDL042C	FRE3	Q08905	711 aa		6	□□□□□ -1.45
SIR2	YDL042C	CTI6	Q08923	506 aa		6	□□□□□ -1.45
SIR2	YDL042C	RCN2	Q12044	265 aa		6	□□□□□ -1.45
SIR2	YDL042C	RRI1	Q12468	440 aa		6	□□□□□ -1.45
SIR2	YDL042C	SPE2	P21182	396 aa		5.99	□□□□□ -1.45
SIR2	YDL042C	CNA1	P23287	553 aa		5.99	□□□□□ -1.45
SIR2	YDL042C	STE50	P25344	346 aa		5.99	□□□□□ -1.45
SIR2	YDL042C	SNU114	P36048	1008 aa	Known RBP	5.99	□□□□□ -1.45
SIR2	YDL042C	MNN2	P38069	597 aa		5.99	□□□□□ -1.45
SIR2	YDL042C	MRX6	P48564	524 aa		5.99	□□□□□ -1.45
SIR2	YDL042C	DIA3	P52290	468 aa		5.99	□□□□□ -1.45
SIR2	YDL042C	COP1	P53622	1201 aa	Known RBP	5.99	□□□□□ -1.45
SIR2	YDL042C	EAF7	P53911	425 aa	Known RBP	5.99	□□□□□ -1.45
SIR2	YDL042C	YOL159C	Q08300	171 aa		5.99	□□□□□ -1.45
SIR2	YDL042C	SPE4	Q12455	300 aa		5.99	□□□□□ -1.45
SIR2	YDL042C	ULS1	Q08562	1619 aa		5.99	□□□□□ -1.45
SIR2	YDL042C	PDR12	Q02785	1511 aa		5.99	□□□□□ -1.45
SIR2	YDL042C	YAP1	P19880	650 aa	Known RBP	5.98	□□□□□ -1.45
SIR2	YDL042C	ADH7	P25377	361 aa		5.98	□□□□□ -1.45
SIR2	YDL042C	YKL050C	P35736	922 aa		5.98	□□□□□ -1.45
SIR2	YDL042C	VPS41	P38959	992 aa		5.98	□□□□□ -1.45
SIR2	YDL042C	GLO1	P50107	326 aa		5.98	□□□□□ -1.45
SIR2	YDL042C	TIM10	P87108	93 aa		5.98	□□□□□ -1.45
SIR2	YDL042C	TDA9	Q04545	1251 aa		5.98	□□□□□ -1.45
SIR2	YDL042C	SWF1	Q04629	336 aa		5.98	□□□□□ -1.45
SIR2	YDL042C	CRC1	Q12289	327 aa		5.98	□□□□□ -1.45
SIR2	YDL042C	GCN4	P03069	281 aa		5.98	□□□□□ -1.45
SIR2	YDL042C	ARD1	P07347	238 aa	Predicted RBP	5.98	□□□□□ -1.45
SIR2	YDL042C	YIH1	P25637	258 aa		5.98	□□□□□ -1.45
SIR2	YDL042C	PEP3	P27801	918 aa		5.98	□□□□□ -1.45
SIR2	YDL042C	AFG3	P39925	761 aa		5.98	□□□□□ -1.45
SIR2	YDL042C	LTP1	P40347	161 aa		5.98	□□□□□ -1.45
SIR2	YDL042C	CFD1	P40558	293 aa		5.98	□□□□□ -1.45
SIR2	YDL042C	YTP1	P53584	459 aa		5.98	□□□□□ -1.45
SIR2	YDL042C	YMR178W	Q03219	274 aa	Known RBP	5.98	□□□□□ -1.45
SIR2	YDL042C	BUD22	Q04347	519 aa	Known RBP	5.98	□□□□□ -1.45
SIR2	YDL042C	YPL272C	Q08984	517 aa		5.98	□□□□□ -1.45
SIR2	YDL042C	APL4	Q12028	832 aa		5.98	□□□□□ -1.45
SIR2	YDL042C	LCB1	P25045	558 aa	Known RBP	5.97	□□□□□ -1.45
SIR2	YDL042C	YIL024C	P40543	189 aa		5.97	□□□□□ -1.45
SIR2	YDL042C	PSA1	P41940	361 aa	Known RBP	5.97	□□□□□ -1.45
SIR2	YDL042C	VPS75	P53853	264 aa		5.97	□□□□□ -1.45
SIR2	YDL042C	YNL144C	P53907	740 aa		5.97	□□□□□ -1.45
SIR2	YDL042C	ASI1	P54074	624 aa		5.97	□□□□□ -1.45
SIR2	YDL042C	ZDS2	P54786	942 aa		5.97	□□□□□ -1.45
SIR2	YDL042C	ECM22	Q05958	814 aa	Predicted RBP	5.97	□□□□□ -1.45
SIR2	YDL042C	TAH18	Q12181	623 aa		5.97	□□□□□ -1.45
SIR2	YDL042C	ELO1	P39540	310 aa		5.96	□□□□□ -1.46
SIR2	YDL042C	NOC2	P39744	710 aa	Known RBP	5.96	□□□□□ -1.46
SIR2	YDL042C	NPR2	P39923	615 aa		5.96	□□□□□ -1.46
SIR2	YDL042C	MFB1	Q04922	465 aa		5.96	□□□□□ -1.46
SIR2	YDL042C	IRC20	Q06554	1556 aa		5.96	□□□□□ -1.46
SIR2	YDL042C	DRS2	P39524	1355 aa		5.96	□□□□□ -1.46
SIR2	YDL042C	SPO14	P36126	1683 aa		5.96	□□□□□ -1.46

Retrieved 100 of 5,963 RNA–protein pairs in 20.7 ms