RNA–Protein interactions for RNA: YDL036C

PUS9, Transcript of Mitochondrial tRNA:pseudouridine synthase, yeast

Gene PUS9, Length 1,389 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PUS9	YDL036C	YFR020W	P43600	232 aa		4.66	□□□□□ -1.66
PUS9	YDL036C	YPR003C	P53394	754 aa		4.66	□□□□□ -1.66
PUS9	YDL036C	JJJ1	P53863	590 aa		4.66	□□□□□ -1.66
PUS9	YDL036C	YMR155W	Q03795	547 aa		4.66	□□□□□ -1.66
PUS9	YDL036C	YOR389W	Q08912	624 aa		4.66	□□□□□ -1.66
PUS9	YDL036C	RDL1	Q12305	139 aa	Known RBP	4.66	□□□□□ -1.66
PUS9	YDL036C	SPE2	P21182	396 aa		4.65	□□□□□ -1.66
PUS9	YDL036C	RPC53	P25441	422 aa		4.65	□□□□□ -1.66
PUS9	YDL036C	MNN2	P38069	597 aa		4.65	□□□□□ -1.66
PUS9	YDL036C	VID24	P38263	362 aa		4.65	□□□□□ -1.66
PUS9	YDL036C	FAR3	P46671	204 aa		4.65	□□□□□ -1.66
PUS9	YDL036C	IRC8	P47046	822 aa		4.65	□□□□□ -1.66
PUS9	YDL036C	EFM6	P53970	246 aa		4.65	□□□□□ -1.66
PUS9	YDL036C	VPS38	Q05919	439 aa		4.65	□□□□□ -1.66
PUS9	YDL036C	RIM20	Q12033	661 aa		4.65	□□□□□ -1.66
PUS9	YDL036C	AVL9	Q12500	764 aa		4.65	□□□□□ -1.66
PUS9	YDL036C	PDX1	P16451	410 aa		4.65	□□□□□ -1.67
PUS9	YDL036C	SSE2	P32590	693 aa	Known RBP	4.65	□□□□□ -1.67
PUS9	YDL036C	VMA8	P32610	256 aa	Known RBP	4.65	□□□□□ -1.67
PUS9	YDL036C	PXA2	P34230	853 aa		4.65	□□□□□ -1.67
PUS9	YDL036C	SMF1	P38925	575 aa		4.65	□□□□□ -1.67
PUS9	YDL036C	ELO1	P39540	310 aa		4.65	□□□□□ -1.67
PUS9	YDL036C	CDC1	P40986	491 aa		4.65	□□□□□ -1.67
PUS9	YDL036C	YGR127W	P53275	312 aa		4.65	□□□□□ -1.67
PUS9	YDL036C	YGR250C	P53316	781 aa	Known RBP	4.65	□□□□□ -1.67
PUS9	YDL036C	BOP3	P53958	396 aa		4.65	□□□□□ -1.67
PUS9	YDL036C	ZDS2	P54786	942 aa		4.65	□□□□□ -1.67
PUS9	YDL036C	MAK10	Q02197	733 aa		4.65	□□□□□ -1.67
PUS9	YDL036C	YPL068C	Q02749	293 aa		4.65	□□□□□ -1.67
PUS9	YDL036C	ETT1	Q08421	412 aa	Known RBP	4.65	□□□□□ -1.67
PUS9	YDL036C	LEU9	Q12166	604 aa	Known RBP	4.65	□□□□□ -1.67
PUS9	YDL036C	EST1	P17214	699 aa	Predicted RBP	4.64	□□□□□ -1.67
PUS9	YDL036C	MSS51	P32335	436 aa		4.64	□□□□□ -1.67
PUS9	YDL036C	SEF1	P34228	1148 aa		4.64	□□□□□ -1.67
PUS9	YDL036C	PEX5	P35056	612 aa		4.64	□□□□□ -1.67
PUS9	YDL036C	CST26	P38226	397 aa		4.64	□□□□□ -1.67
PUS9	YDL036C	IMD2	P38697	523 aa	Known RBP	4.64	□□□□□ -1.67
PUS9	YDL036C	DOT5	P40553	215 aa		4.64	□□□□□ -1.67
PUS9	YDL036C	SGN1	P40561	250 aa	Known RBP RIP-Chip data	4.64	□□□□□ -1.67	not detected
PUS9	YDL036C	TAX4	P47030	604 aa		4.64	□□□□□ -1.67
PUS9	YDL036C	IMD3	P50095	523 aa	Known RBP	4.64	□□□□□ -1.67
PUS9	YDL036C	MDG1	P53885	366 aa		4.64	□□□□□ -1.67
PUS9	YDL036C	STP1	Q00947	519 aa		4.64	□□□□□ -1.67
PUS9	YDL036C	YLR455W	Q06188	304 aa		4.64	□□□□□ -1.67
PUS9	YDL036C	BSP1	Q06604	576 aa		4.64	□□□□□ -1.67
PUS9	YDL036C	YLR049C	Q12110	428 aa		4.64	□□□□□ -1.67
PUS9	YDL036C	HOM3	P10869	527 aa		4.63	□□□□□ -1.67
PUS9	YDL036C	RAP1	P11938	827 aa		4.63	□□□□□ -1.67
PUS9	YDL036C	PUP3	P25451	205 aa	Known RBP	4.63	□□□□□ -1.67
PUS9	YDL036C	GPI10	P30777	616 aa		4.63	□□□□□ -1.67
PUS9	YDL036C	DBF4	P32325	704 aa		4.63	□□□□□ -1.67
PUS9	YDL036C	TCD2	P36101	447 aa	Known RBP	4.63	□□□□□ -1.67
PUS9	YDL036C	ERV46	P39727	415 aa		4.63	□□□□□ -1.67
PUS9	YDL036C	ALG5	P40350	334 aa		4.63	□□□□□ -1.67
PUS9	YDL036C	CIN1	P40987	1014 aa		4.63	□□□□□ -1.67
PUS9	YDL036C	ORC5	P50874	479 aa		4.63	□□□□□ -1.67
PUS9	YDL036C	YML6	P51998	286 aa		4.63	□□□□□ -1.67
PUS9	YDL036C	RSC1	P53236	928 aa		4.63	□□□□□ -1.67
PUS9	YDL036C	NNF2	P53253	936 aa		4.63	□□□□□ -1.67
PUS9	YDL036C	YMR178W	Q03219	274 aa	Known RBP	4.63	□□□□□ -1.67
PUS9	YDL036C	FIN1	Q03898	291 aa		4.63	□□□□□ -1.67
PUS9	YDL036C	DPB4	Q04603	196 aa	Known RBP	4.63	□□□□□ -1.67
PUS9	YDL036C	APL4	Q12028	832 aa		4.63	□□□□□ -1.67
PUS9	YDL036C	ATG29	Q12092	213 aa		4.63	□□□□□ -1.67
PUS9	YDL036C	GAL80	P04387	435 aa		4.62	□□□□□ -1.67
PUS9	YDL036C	CHO1	P08456	276 aa		4.62	□□□□□ -1.67
PUS9	YDL036C	ILS1	P09436	1072 aa	Known RBP	4.62	□□□□□ -1.67
PUS9	YDL036C	PDA1	P16387	420 aa	Known RBP	4.62	□□□□□ -1.67
PUS9	YDL036C	MRE11	P32829	692 aa		4.62	□□□□□ -1.67
PUS9	YDL036C	YBR144C	P34215	104 aa		4.62	□□□□□ -1.67
PUS9	YDL036C	BLI1	P35727	113 aa		4.62	□□□□□ -1.67
PUS9	YDL036C	SRP72	P38688	640 aa	Known RBP	4.62	□□□□□ -1.67
PUS9	YDL036C	APT1	P49435	187 aa	Known RBP	4.62	□□□□□ -1.67
PUS9	YDL036C	TWF1	P53250	332 aa		4.62	□□□□□ -1.67
PUS9	YDL036C	PFA5	Q03289	374 aa		4.62	□□□□□ -1.67
PUS9	YDL036C	MRD1	Q06106	887 aa	Known RBP	4.62	□□□□□ -1.67
PUS9	YDL036C	GRC3	Q07845	632 aa		4.62	□□□□□ -1.67
PUS9	YDL036C	SNU66	Q12420	587 aa	Predicted RBP	4.62	□□□□□ -1.67
PUS9	YDL036C	KGD1	P20967	1014 aa	Known RBP	4.61	□□□□□ -1.67
PUS9	YDL036C	TKL1	P23254	680 aa	Known RBP	4.61	□□□□□ -1.67
PUS9	YDL036C	CLB3	P24870	427 aa		4.61	□□□□□ -1.67
PUS9	YDL036C	IMG1	P25626	169 aa		4.61	□□□□□ -1.67
PUS9	YDL036C	SAC1	P32368	623 aa	Known RBP	4.61	□□□□□ -1.67
PUS9	YDL036C	WBP1	P33767	430 aa	Known RBP	4.61	□□□□□ -1.67
PUS9	YDL036C	TIF3	P34167	436 aa	Known RBP	4.61	□□□□□ -1.67
PUS9	YDL036C	OCT1	P35999	772 aa		4.61	□□□□□ -1.67
PUS9	YDL036C	TSC10	P38342	320 aa		4.61	□□□□□ -1.67
PUS9	YDL036C	OTU2	P38747	307 aa	Known RBP	4.61	□□□□□ -1.67
PUS9	YDL036C	MAF1	P41910	395 aa		4.61	□□□□□ -1.67
PUS9	YDL036C	IMD4	P50094	524 aa	Known RBP	4.61	□□□□□ -1.67
PUS9	YDL036C	YDR239C	Q03780	787 aa		4.61	□□□□□ -1.67
PUS9	YDL036C	SNU56	Q03782	492 aa	Known RBP	4.61	□□□□□ -1.67
PUS9	YDL036C	YDR131C	Q03899	556 aa		4.61	□□□□□ -1.67
PUS9	YDL036C	RQC1	Q05468	723 aa	Known RBP	4.61	□□□□□ -1.67
PUS9	YDL036C	ECM22	Q05958	814 aa	Predicted RBP	4.61	□□□□□ -1.67
PUS9	YDL036C	YLR352W	Q06479	807 aa		4.61	□□□□□ -1.67
PUS9	YDL036C	SMC6	Q12749	1114 aa		4.61	□□□□□ -1.67
PUS9	YDL036C	GPA1	P08539	472 aa		4.6	□□□□□ -1.67
PUS9	YDL036C	MBR1	P23493	339 aa		4.6	□□□□□ -1.67
PUS9	YDL036C	STE50	P25344	346 aa		4.6	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 7.3 ms