RNA–Protein interactions for RNA: YCR094W

CDC50, Transcript of Endosomal protein that interacts with phospholipid flippase Drs2p, yeastyeast

Gene CDC50, Length 1,176 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC50YCR094W ENT1Q12518 454 aa2.39□□□□□ -2.03
CDC50YCR094W PGA3Q12746 312 aaKnown RBP2.39□□□□□ -2.03
CDC50YCR094W VCX1Q99385 411 aa2.39□□□□□ -2.03
CDC50YCR094W YER145C-AA0A023PYF4 145 aa2.38□□□□□ -2.03
CDC50YCR094W TPK1P06244 397 aa2.38□□□□□ -2.03
CDC50YCR094W MRP7P12687 371 aa2.38□□□□□ -2.03
CDC50YCR094W SGF29P25554 259 aa2.38□□□□□ -2.03
CDC50YCR094W CMK1P27466 446 aaKnown RBP2.38□□□□□ -2.03
CDC50YCR094W RAD16P31244 790 aa2.38□□□□□ -2.03
CDC50YCR094W CNS1P33313 385 aa2.38□□□□□ -2.03
CDC50YCR094W YBR225WP38321 900 aa2.38□□□□□ -2.03
CDC50YCR094W UME6P39001 836 aa2.38□□□□□ -2.03
CDC50YCR094W SPG5P42933 373 aa2.38□□□□□ -2.03
CDC50YCR094W SGM1P47166 707 aa2.38□□□□□ -2.03
CDC50YCR094W COG1P53079 417 aa2.38□□□□□ -2.03
CDC50YCR094W DUO1P53168 247 aaKnown RBP2.38□□□□□ -2.03
CDC50YCR094W RBG2P53295 368 aaKnown RBP2.38□□□□□ -2.03
CDC50YCR094W YGR250CP53316 781 aaKnown RBP2.38□□□□□ -2.03
CDC50YCR094W BSC5P53755 489 aa2.38□□□□□ -2.03
CDC50YCR094W BOR1P53838 576 aa2.38□□□□□ -2.03
CDC50YCR094W REG1Q00816 1014 aa2.38□□□□□ -2.03
CDC50YCR094W ATG21Q02887 496 aa2.38□□□□□ -2.03
CDC50YCR094W RCO1Q04779 684 aa2.38□□□□□ -2.03
CDC50YCR094W VIP1Q06685 1146 aaKnown RBP2.38□□□□□ -2.03
CDC50YCR094W SNU66Q12420 587 aaPredicted RBP2.38□□□□□ -2.03
CDC50YCR094W COX1P00401 534 aa2.37□□□□□ -2.03
CDC50YCR094W KAR3P17119 729 aa2.37□□□□□ -2.03
CDC50YCR094W ERG8P24521 451 aa2.37□□□□□ -2.03
CDC50YCR094W URK1P27515 501 aa2.37□□□□□ -2.03
CDC50YCR094W SAC6P32599 642 aaKnown RBP2.37□□□□□ -2.03
CDC50YCR094W NUP120P35729 1037 aa2.37□□□□□ -2.03
CDC50YCR094W MRPL36P36531 177 aa2.37□□□□□ -2.03
CDC50YCR094W VTC2P43585 828 aa2.37□□□□□ -2.03
CDC50YCR094W ARC1P46672 376 aaKnown RBP2.37□□□□□ -2.03
CDC50YCR094W VPS4P52917 437 aa2.37□□□□□ -2.03
CDC50YCR094W NGL3Q03210 505 aa2.37□□□□□ -2.03
CDC50YCR094W MFB1Q04922 465 aa2.37□□□□□ -2.03
CDC50YCR094W UTP21Q06078 939 aaPredicted RBP2.37□□□□□ -2.03
CDC50YCR094W ENT4Q07872 247 aa2.37□□□□□ -2.03
CDC50YCR094W PSK2Q08217 1101 aa2.37□□□□□ -2.03
CDC50YCR094W SCM3Q12334 223 aa2.37□□□□□ -2.03
CDC50YCR094W YBR255C-AQ3E776 120 aa2.37□□□□□ -2.03
CDC50YCR094W ATP2P00830 511 aaKnown RBP2.36□□□□□ -2.03
CDC50YCR094W CTT1P06115 562 aa2.36□□□□□ -2.03
CDC50YCR094W SUI3P09064 285 aaKnown RBP2.36□□□□□ -2.03
CDC50YCR094W YML003WP0CF16 290 aa2.36□□□□□ -2.03
CDC50YCR094W PFK2P16862 959 aaKnown RBP RIP-Chip data2.36□□□□□ -2.03not detected
CDC50YCR094W PDE1P22434 369 aa2.36□□□□□ -2.03
CDC50YCR094W SWC3P31376 625 aa2.36□□□□□ -2.03
CDC50YCR094W NPL6P32832 435 aa2.36□□□□□ -2.03
CDC50YCR094W PDR3P33200 976 aa2.36□□□□□ -2.03
CDC50YCR094W YPK3P38070 525 aa2.36□□□□□ -2.03
CDC50YCR094W FAF1P40546 346 aaPredicted RBP2.36□□□□□ -2.03
CDC50YCR094W IST3P40565 148 aaPredicted RBP2.36□□□□□ -2.03
CDC50YCR094W MRX6P48564 524 aa2.36□□□□□ -2.03
CDC50YCR094W PIL1P53252 339 aaKnown RBP2.36□□□□□ -2.03
CDC50YCR094W MRPL19P53875 158 aa2.36□□□□□ -2.03
CDC50YCR094W INN1P53901 409 aa2.36□□□□□ -2.03
CDC50YCR094W YPL108WQ02872 168 aaPredicted RBP2.36□□□□□ -2.03
CDC50YCR094W MUB1Q03162 620 aa2.36□□□□□ -2.03
CDC50YCR094W YLR302CO13544 120 aa2.35□□□□□ -2.03
CDC50YCR094W ERG3P32353 365 aa2.35□□□□□ -2.03
CDC50YCR094W ALY1P36117 915 aa2.35□□□□□ -2.03
CDC50YCR094W LSM5P40089 93 aaKnown RBP2.35□□□□□ -2.03
CDC50YCR094W YIR014WP40570 242 aa2.35□□□□□ -2.03
CDC50YCR094W AAD10P47182 288 aa2.35□□□□□ -2.03
CDC50YCR094W RSC1P53236 928 aa2.35□□□□□ -2.03
CDC50YCR094W VPS75P53853 264 aa2.35□□□□□ -2.03
CDC50YCR094W YNL234WP53857 426 aa2.35□□□□□ -2.03
CDC50YCR094W APJ1P53940 528 aa2.35□□□□□ -2.03
CDC50YCR094W SPC19Q03954 165 aa2.35□□□□□ -2.03
CDC50YCR094W RAD30Q04049 632 aa2.35□□□□□ -2.03
CDC50YCR094W GTB1Q04924 702 aa2.35□□□□□ -2.03
CDC50YCR094W RIX7Q07844 837 aaKnown RBP2.35□□□□□ -2.03
CDC50YCR094W TMA16Q08687 178 aa2.35□□□□□ -2.03
CDC50YCR094W YLL056CQ12177 298 aa2.35□□□□□ -2.03
CDC50YCR094W SKM1Q12469 655 aa2.35□□□□□ -2.03
CDC50YCR094W HSH49Q99181 213 aaPredicted RBP2.35□□□□□ -2.03
CDC50YCR094W ARG3P05150 338 aa2.34□□□□□ -2.03
CDC50YCR094W HOM3P10869 527 aa2.34□□□□□ -2.03
CDC50YCR094W CDC24P11433 854 aaPredicted RBP2.34□□□□□ -2.03
CDC50YCR094W SPO16P17122 198 aa2.34□□□□□ -2.03
CDC50YCR094W YCK1P23291 538 aa2.34□□□□□ -2.03
CDC50YCR094W YSP3P25036 478 aa2.34□□□□□ -2.03
CDC50YCR094W ROX1P25042 368 aa2.34□□□□□ -2.03
CDC50YCR094W LRE1P25579 583 aaKnown RBP2.34□□□□□ -2.03
CDC50YCR094W NOP4P37838 685 aaKnown RBP2.34□□□□□ -2.03
CDC50YCR094W UBP13P38187 747 aa2.34□□□□□ -2.03
CDC50YCR094W RTS1P38903 757 aa2.34□□□□□ -2.03
CDC50YCR094W CCT6P39079 546 aa2.34□□□□□ -2.03
CDC50YCR094W FLC2P39719 783 aa2.34□□□□□ -2.03
CDC50YCR094W SLZ1P40167 298 aa2.34□□□□□ -2.03
CDC50YCR094W SPO22P40511 975 aa2.34□□□□□ -2.03
CDC50YCR094W YPI1P43587 155 aa2.34□□□□□ -2.03
CDC50YCR094W ASE1P50275 885 aa2.34□□□□□ -2.03
CDC50YCR094W DSD1P53095 428 aa2.34□□□□□ -2.03
CDC50YCR094W YGR079WP53249 370 aa2.34□□□□□ -2.03
CDC50YCR094W MTG1Q03151 367 aaPredicted RBP2.34□□□□□ -2.03
CDC50YCR094W RSF1Q05043 376 aa2.34□□□□□ -2.03
CDC50YCR094W YLR287CQ05881 355 aa2.34□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 32.9 ms