RNA–Protein interactions for RNA: YBR109C

CMD1, Transcript of Calmodulin, yeast

Gene CMD1, Length 444 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CMD1	YBR109C	TDA10	P42938	290 aa		3.52	□□□□□ -1.85
CMD1	YBR109C	PIB2	P53191	635 aa		3.52	□□□□□ -1.85
CMD1	YBR109C	UBX2	Q04228	584 aa		3.52	□□□□□ -1.85
CMD1	YBR109C	SNO4	Q04902	237 aa		3.52	□□□□□ -1.85
CMD1	YBR109C	YLR287C	Q05881	355 aa		3.52	□□□□□ -1.85
CMD1	YBR109C	IMH1	Q06704	911 aa	Known RBP	3.52	□□□□□ -1.85
CMD1	YBR109C	HSP33	Q08914	237 aa	Known RBP	3.52	□□□□□ -1.85
CMD1	YBR109C	HSP32	Q08992	237 aa		3.52	□□□□□ -1.85
CMD1	YBR109C	ENT1	Q12518	454 aa		3.52	□□□□□ -1.85
CMD1	YBR109C	YRF1-3	P0CX14	1859 aa		3.52	□□□□□ -1.85
CMD1	YBR109C	YRF1-7	P0CX15	1859 aa		3.52	□□□□□ -1.85
CMD1	YBR109C	YRF1-6	P53819	1859 aa		3.52	□□□□□ -1.85
CMD1	YBR109C	UTP10	P42945	1769 aa	Known RBP	3.51	□□□□□ -1.85
CMD1	YBR109C	CDC8	P00572	216 aa		3.51	□□□□□ -1.85
CMD1	YBR109C	ARD1	P07347	238 aa	Predicted RBP	3.51	□□□□□ -1.85
CMD1	YBR109C	HEM1	P09950	548 aa	Predicted RBP	3.51	□□□□□ -1.85
CMD1	YBR109C	CDC15	P27636	974 aa		3.51	□□□□□ -1.85
CMD1	YBR109C	CBF2	P32504	956 aa		3.51	□□□□□ -1.85
CMD1	YBR109C	SIP1	P32578	815 aa		3.51	□□□□□ -1.85
CMD1	YBR109C	OLA1	P38219	394 aa	Known RBP	3.51	□□□□□ -1.85
CMD1	YBR109C	VBA2	P38358	474 aa	Known RBP	3.51	□□□□□ -1.85
CMD1	YBR109C	CTM1	P38818	585 aa		3.51	□□□□□ -1.85
CMD1	YBR109C	SPT8	P38915	602 aa		3.51	□□□□□ -1.85
CMD1	YBR109C	NAB3	P38996	802 aa	Known RBP RIP-Chip data	3.51	□□□□□ -1.85	not detected
CMD1	YBR109C	EXO1	P39875	702 aa		3.51	□□□□□ -1.85
CMD1	YBR109C	DPH1	P40487	425 aa	Known RBP	3.51	□□□□□ -1.85
CMD1	YBR109C	YGL082W	P53155	381 aa		3.51	□□□□□ -1.85
CMD1	YBR109C	REG1	Q00816	1014 aa		3.51	□□□□□ -1.85
CMD1	YBR109C	VPS72	Q03388	795 aa		3.51	□□□□□ -1.85
CMD1	YBR109C	YMR018W	Q04364	514 aa		3.51	□□□□□ -1.85
CMD1	YBR109C	PLM2	Q04383	521 aa		3.51	□□□□□ -1.85
CMD1	YBR109C	MRD1	Q06106	887 aa	Known RBP	3.51	□□□□□ -1.85
CMD1	YBR109C	ATG23	Q06671	453 aa		3.51	□□□□□ -1.85
CMD1	YBR109C	TMA16	Q08687	178 aa		3.51	□□□□□ -1.85
CMD1	YBR109C	SWT1	Q12104	458 aa		3.51	□□□□□ -1.85
CMD1	YBR109C	GET3	Q12154	354 aa	Known RBP	3.51	□□□□□ -1.85
CMD1	YBR109C	COX1	P00401	534 aa		3.5	□□□□□ -1.85
CMD1	YBR109C	HIS4	P00815	799 aa	Known RBP	3.5	□□□□□ -1.85
CMD1	YBR109C	AQY1	P0CD91	305 aa		3.5	□□□□□ -1.85
CMD1	YBR109C	ALG1	P16661	449 aa		3.5	□□□□□ -1.85
CMD1	YBR109C	LRE1	P25579	583 aa	Known RBP	3.5	□□□□□ -1.85
CMD1	YBR109C	RPC34	P32910	317 aa		3.5	□□□□□ -1.85
CMD1	YBR109C	UBC6	P33296	250 aa	Predicted RBP	3.5	□□□□□ -1.85
CMD1	YBR109C	PPZ2	P33329	710 aa		3.5	□□□□□ -1.85
CMD1	YBR109C	RTS1	P38903	757 aa		3.5	□□□□□ -1.85
CMD1	YBR109C	VPS41	P38959	992 aa		3.5	□□□□□ -1.85
CMD1	YBR109C	PSD1	P39006	500 aa		3.5	□□□□□ -1.85
CMD1	YBR109C	RIC1	P40395	1056 aa		3.5	□□□□□ -1.85
CMD1	YBR109C	YIL161W	P40449	235 aa	Known RBP	3.5	□□□□□ -1.85
CMD1	YBR109C	IST3	P40565	148 aa	Predicted RBP	3.5	□□□□□ -1.85
CMD1	YBR109C	EPL1	P43572	832 aa		3.5	□□□□□ -1.85
CMD1	YBR109C	ASE1	P50275	885 aa		3.5	□□□□□ -1.85
CMD1	YBR109C	CBK1	P53894	756 aa		3.5	□□□□□ -1.85
CMD1	YBR109C	SEC5	P89102	971 aa		3.5	□□□□□ -1.85
CMD1	YBR109C	FCP1	Q03254	732 aa		3.5	□□□□□ -1.85
CMD1	YBR109C	SML1	Q04964	104 aa		3.5	□□□□□ -1.85
CMD1	YBR109C	COQ11	Q05892	277 aa		3.5	□□□□□ -1.85
CMD1	YBR109C	MMR1	Q06324	491 aa		3.5	□□□□□ -1.85
CMD1	YBR109C	ARO10	Q06408	635 aa		3.5	□□□□□ -1.85
CMD1	YBR109C	VAC14	Q06708	880 aa		3.5	□□□□□ -1.85
CMD1	YBR109C	CYK3	Q07533	885 aa		3.5	□□□□□ -1.85
CMD1	YBR109C	YPL191C	Q08930	360 aa		3.5	□□□□□ -1.85
CMD1	YBR109C	YDR056C	Q12025	205 aa		3.5	□□□□□ -1.85
CMD1	YBR109C	PGA3	Q12746	312 aa	Known RBP	3.5	□□□□□ -1.85
CMD1	YBR109C	YOL087C	Q99247	1116 aa		3.5	□□□□□ -1.85
CMD1	YBR109C	AI5_ALPHA	Q9ZZX1	630 aa		3.5	□□□□□ -1.85
CMD1	YBR109C	RIM15	P43565	1770 aa		3.5	□□□□□ -1.85
CMD1	YBR109C	FAS2	P19097	1887 aa	Known RBP	3.5	□□□□□ -1.85
CMD1	YBR109C	YLR302C	O13544	120 aa		3.49	□□□□□ -1.85
CMD1	YBR109C	RPB2	P08518	1224 aa	Known RBP	3.49	□□□□□ -1.85
CMD1	YBR109C	OM45	P16547	393 aa		3.49	□□□□□ -1.85
CMD1	YBR109C	SPO16	P17122	198 aa		3.49	□□□□□ -1.85
CMD1	YBR109C	CKI1	P20485	582 aa		3.49	□□□□□ -1.85
CMD1	YBR109C	RFA2	P26754	273 aa	Known RBP	3.49	□□□□□ -1.85
CMD1	YBR109C	CHS3	P29465	1165 aa		3.49	□□□□□ -1.85
CMD1	YBR109C	HES1	P35843	434 aa		3.49	□□□□□ -1.85
CMD1	YBR109C	RXT2	P38255	430 aa		3.49	□□□□□ -1.85
CMD1	YBR109C	TOM71	P38825	639 aa	Known RBP	3.49	□□□□□ -1.85
CMD1	YBR109C	MNT3	P40549	630 aa		3.49	□□□□□ -1.85
CMD1	YBR109C	DSN1	P40568	576 aa		3.49	□□□□□ -1.85
CMD1	YBR109C	VTC2	P43585	828 aa		3.49	□□□□□ -1.85
CMD1	YBR109C	YJL043W	P47053	257 aa		3.49	□□□□□ -1.85
CMD1	YBR109C	CAF130	P53280	1122 aa	Predicted RBP	3.49	□□□□□ -1.85
CMD1	YBR109C	FMP30	Q02883	468 aa		3.49	□□□□□ -1.85
CMD1	YBR109C	TMA64	Q04600	565 aa	Known RBP	3.49	□□□□□ -1.85
CMD1	YBR109C	CSM3	Q04659	317 aa		3.49	□□□□□ -1.85
CMD1	YBR109C	ATG9	Q12142	997 aa		3.49	□□□□□ -1.85
CMD1	YBR109C	BUG1	Q12191	341 aa		3.49	□□□□□ -1.85
CMD1	YBR109C	YKL068W-A	Q3E826	78 aa		3.49	□□□□□ -1.85
CMD1	YBR109C	VCX1	Q99385	411 aa		3.49	□□□□□ -1.85
CMD1	YBR109C	FUM1	P08417	488 aa	Known RBP	3.48	□□□□□ -1.85
CMD1	YBR109C	THR4	P16120	514 aa	Known RBP	3.48	□□□□□ -1.85
CMD1	YBR109C	MAK31	P23059	88 aa		3.48	□□□□□ -1.85
CMD1	YBR109C	ERG8	P24521	451 aa		3.48	□□□□□ -1.85
CMD1	YBR109C	YSP3	P25036	478 aa		3.48	□□□□□ -1.85
CMD1	YBR109C	GFD2	P25370	566 aa	Known RBP	3.48	□□□□□ -1.85
CMD1	YBR109C	LAC1	P28496	418 aa		3.48	□□□□□ -1.85
CMD1	YBR109C	SMY1	P32364	656 aa	Known RBP	3.48	□□□□□ -1.85
CMD1	YBR109C	MRP20	P32387	263 aa		3.48	□□□□□ -1.85
CMD1	YBR109C	KES1	P35844	434 aa	Known RBP	3.48	□□□□□ -1.85

Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms