RNA–Protein interactions for RNA: YBL006C

LDB7, Transcript of Component of the RSC chromatin remodeling complex, yeastyeast

Gene LDB7, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDB7YBL006C TPS2P31688 896 aaKnown RBP6.77□□□□□ -1.33
LDB7YBL006C MF(ALPHA)2P32435 120 aa6.77□□□□□ -1.33
LDB7YBL006C TIP20P33891 701 aa6.77□□□□□ -1.33
LDB7YBL006C LYS1P38998 373 aaRIP-Chip data6.77□□□□□ -1.33not detected
LDB7YBL006C SPG5P42933 373 aa6.77□□□□□ -1.33
LDB7YBL006C JSN1P47135 1091 aaKnown RBP RIP-Chip data6.77□□□□□ -1.33not detected
LDB7YBL006C ARE2P53629 642 aaKnown RBP6.77□□□□□ -1.33
LDB7YBL006C DIC1Q06143 298 aa6.77□□□□□ -1.33
LDB7YBL006C MCM16Q12262 181 aa6.77□□□□□ -1.33
LDB7YBL006C YOR012WQ12351 137 aa6.77□□□□□ -1.33
LDB7YBL006C CMR1Q12510 522 aaKnown RBP6.77□□□□□ -1.33
LDB7YBL006C RRP12Q12754 1228 aaKnown RBP6.77□□□□□ -1.33
LDB7YBL006C PHO5P00635 467 aa6.76□□□□□ -1.33
LDB7YBL006C HSP60P19882 572 aaKnown RBP6.76□□□□□ -1.33
LDB7YBL006C ATP12P22135 325 aa6.76□□□□□ -1.33
LDB7YBL006C GCG1P32656 232 aaKnown RBP6.76□□□□□ -1.33
LDB7YBL006C TOM20P35180 183 aa6.76□□□□□ -1.33
LDB7YBL006C TAF14P35189 244 aa6.76□□□□□ -1.33
LDB7YBL006C RPF2P36160 344 aaKnown RBP6.76□□□□□ -1.33
LDB7YBL006C YHR033WP38690 423 aa6.76□□□□□ -1.33
LDB7YBL006C YHR020WP38708 688 aaKnown RBP6.76□□□□□ -1.33
LDB7YBL006C HSE1P38753 452 aa6.76□□□□□ -1.33
LDB7YBL006C YHR182WP38870 785 aa6.76□□□□□ -1.33
LDB7YBL006C GIM4P40005 111 aaKnown RBP6.76□□□□□ -1.33
LDB7YBL006C ALK1P43633 760 aaKnown RBP6.76□□□□□ -1.33
LDB7YBL006C RIM21P48565 533 aa6.76□□□□□ -1.33
LDB7YBL006C RPL22BP56628 122 aaKnown RBP6.76□□□□□ -1.33
LDB7YBL006C GRS2Q06817 618 aa6.76□□□□□ -1.33
LDB7YBL006C HSH49Q99181 213 aaPredicted RBP6.76□□□□□ -1.33
LDB7YBL006C HRP1Q99383 534 aaKnown RBP6.76□□□□□ -1.33
LDB7YBL006C MDM35O60200 86 aa6.75□□□□□ -1.33
LDB7YBL006C MSB1P21339 1137 aaKnown RBP6.75□□□□□ -1.33
LDB7YBL006C URA7P28274 579 aaKnown RBP6.75□□□□□ -1.33
LDB7YBL006C DOM34P33309 386 aa6.75□□□□□ -1.33
LDB7YBL006C SQT1P35184 431 aa6.75□□□□□ -1.33
LDB7YBL006C EMC3P36039 253 aa6.75□□□□□ -1.33
LDB7YBL006C NTR2P36118 322 aaPredicted RBP6.75□□□□□ -1.33
LDB7YBL006C TRM7P38238 310 aaKnown RBP6.75□□□□□ -1.33
LDB7YBL006C YHI9P38765 294 aa6.75□□□□□ -1.33
LDB7YBL006C MAD1P40957 749 aa6.75□□□□□ -1.33
LDB7YBL006C GAT1P43574 510 aa6.75□□□□□ -1.33
LDB7YBL006C PET130P47065 347 aa6.75□□□□□ -1.33
LDB7YBL006C SPP2Q02521 185 aa6.75□□□□□ -1.33
LDB7YBL006C RSM10Q03201 203 aa6.75□□□□□ -1.33
LDB7YBL006C VTI1Q04338 217 aa6.75□□□□□ -1.33
LDB7YBL006C RSC3Q06639 885 aa6.75□□□□□ -1.33
LDB7YBL006C GUP2Q08929 609 aa6.75□□□□□ -1.33
LDB7YBL006C NUS1Q12063 375 aa6.75□□□□□ -1.33
LDB7YBL006C GPR1Q12361 961 aa6.75□□□□□ -1.33
LDB7YBL006C RAD1P06777 1100 aa6.74□□□□□ -1.33
LDB7YBL006C YAR066WP0CX18 203 aa6.74□□□□□ -1.33
LDB7YBL006C YHR214WP0CX19 203 aa6.74□□□□□ -1.33
LDB7YBL006C CBF1P17106 351 aa6.74□□□□□ -1.33
LDB7YBL006C NTH1P32356 751 aa6.74□□□□□ -1.33
LDB7YBL006C ATP11P32453 318 aa6.74□□□□□ -1.33
LDB7YBL006C PET309P32522 965 aaPredicted RBP6.74□□□□□ -1.33
LDB7YBL006C THI80P35202 319 aa6.74□□□□□ -1.33
LDB7YBL006C DEF1P35732 738 aaKnown RBP6.74□□□□□ -1.33
LDB7YBL006C YPT52P36018 234 aaKnown RBP6.74□□□□□ -1.33
LDB7YBL006C PLB1P39105 664 aa6.74□□□□□ -1.33
LDB7YBL006C UTP18P40362 594 aaPredicted RBP6.74□□□□□ -1.33
LDB7YBL006C PFA3P42836 336 aa6.74□□□□□ -1.33
LDB7YBL006C ATG36P46983 293 aa6.74□□□□□ -1.33
LDB7YBL006C NNF1P47149 201 aa6.74□□□□□ -1.33
LDB7YBL006C AAT1Q01802 451 aa6.74□□□□□ -1.33
LDB7YBL006C VHS1Q03785 461 aa6.74□□□□□ -1.33
LDB7YBL006C CDC123Q05791 360 aa6.74□□□□□ -1.33
LDB7YBL006C SYT1Q06836 1226 aa6.74□□□□□ -1.33
LDB7YBL006C YLR030WQ07967 263 aa6.74□□□□□ -1.33
LDB7YBL006C UPC2Q12151 913 aa6.74□□□□□ -1.33
LDB7YBL006C FRE7Q12333 620 aa6.74□□□□□ -1.33
LDB7YBL006C PEP5P12868 1029 aa6.73□□□□□ -1.33
LDB7YBL006C FUR1P18562 216 aaKnown RBP6.73□□□□□ -1.33
LDB7YBL006C SEC15P22224 910 aa6.73□□□□□ -1.33
LDB7YBL006C HOG1P32485 435 aa6.73□□□□□ -1.33
LDB7YBL006C MGM101P32787 269 aaKnown RBP6.73□□□□□ -1.33
LDB7YBL006C RRP1P35178 278 aaPredicted RBP6.73□□□□□ -1.33
LDB7YBL006C YHL008CP38750 627 aa6.73□□□□□ -1.33
LDB7YBL006C YHR045WP38775 560 aa6.73□□□□□ -1.33
LDB7YBL006C MNN1P39106 762 aa6.73□□□□□ -1.33
LDB7YBL006C NDC80P40460 691 aa6.73□□□□□ -1.33
LDB7YBL006C YFR020WP43600 232 aa6.73□□□□□ -1.33
LDB7YBL006C SAE2P46946 345 aa6.73□□□□□ -1.33
LDB7YBL006C CCT8P47079 568 aaKnown RBP6.73□□□□□ -1.33
LDB7YBL006C YGR266WP53326 701 aa6.73□□□□□ -1.33
LDB7YBL006C TRS23Q03784 219 aa6.73□□□□□ -1.33
LDB7YBL006C TRM12Q04235 462 aa6.73□□□□□ -1.33
LDB7YBL006C SSL1Q04673 461 aaPredicted RBP6.73□□□□□ -1.33
LDB7YBL006C RRN11Q04712 507 aa6.73□□□□□ -1.33
LDB7YBL006C DIN7Q12086 430 aa6.73□□□□□ -1.33
LDB7YBL006C MRH1Q12117 320 aaPredicted RBP6.73□□□□□ -1.33
LDB7YBL006C ICT1Q12385 394 aa6.73□□□□□ -1.33
LDB7YBL006C STE2D6VTK4 431 aa6.72□□□□□ -1.33
LDB7YBL006C CMD1P06787 147 aaKnown RBP6.72□□□□□ -1.33
LDB7YBL006C PRP16P15938 1071 aaPredicted RBP6.72□□□□□ -1.33
LDB7YBL006C SPO16P17122 198 aa6.72□□□□□ -1.33
LDB7YBL006C PTP1P25044 335 aa6.72□□□□□ -1.33
LDB7YBL006C HRR25P29295 494 aaKnown RBP6.72□□□□□ -1.33
LDB7YBL006C PET112P33893 541 aa6.72□□□□□ -1.33
LDB7YBL006C FMP46P36141 133 aaKnown RBP6.72□□□□□ -1.33
Retrieved 100 of 5,963 RNA–protein pairs in 19.4 ms