RNA–Protein interactions for RNA: YAL005C

SSA1, Transcript of ATPase involved in protein folding and NLS-directed nuclear transport, yeastyeast

Gene SSA1, Length 1,929 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSA1YAL005C TAF12Q03761 539 aa13.29□□□□□ -0.28
SSA1YAL005C HPF1Q05164 967 aa13.29□□□□□ -0.28
SSA1YAL005C ENT2Q05785 613 aa13.29□□□□□ -0.28
SSA1YAL005C HOM2P13663 365 aaKnown RBP13.29□□□□□ -0.28
SSA1YAL005C VAC17P25591 423 aa13.29□□□□□ -0.28
SSA1YAL005C RML2P32611 393 aa13.29□□□□□ -0.28
SSA1YAL005C VRP1P37370 817 aa13.29□□□□□ -0.28
SSA1YAL005C AIF1P52923 378 aa13.29□□□□□ -0.28
SSA1YAL005C TAF6P53040 516 aa13.29□□□□□ -0.28
SSA1YAL005C GOT1Q03554 138 aa13.29□□□□□ -0.28
SSA1YAL005C SHE9Q04172 456 aa13.29□□□□□ -0.28
SSA1YAL005C SPO20Q04359 397 aa13.29□□□□□ -0.28
SSA1YAL005C VTA1Q06263 330 aa13.29□□□□□ -0.28
SSA1YAL005C ENT4Q07872 247 aa13.29□□□□□ -0.28
SSA1YAL005C SUC2P00724 532 aa13.28□□□□□ -0.28
SSA1YAL005C CDC10P25342 322 aaKnown RBP13.28□□□□□ -0.28
SSA1YAL005C AIM20P40451 204 aa13.28□□□□□ -0.28
SSA1YAL005C TRM12Q04235 462 aa13.28□□□□□ -0.28
SSA1YAL005C YLL054CQ12244 843 aa13.28□□□□□ -0.28
SSA1YAL005C YPR089WO13585 888 aa13.27□□□□□ -0.28
SSA1YAL005C SBP1P10080 294 aaKnown RBP13.27□□□□□ -0.28
SSA1YAL005C RFA2P26754 273 aaKnown RBP13.27□□□□□ -0.28
SSA1YAL005C HEM3P28789 327 aa13.27□□□□□ -0.28
SSA1YAL005C TCD2P36101 447 aaKnown RBP13.27□□□□□ -0.28
SSA1YAL005C GIP1P38229 639 aa13.27□□□□□ -0.28
SSA1YAL005C IML3P38265 245 aa13.27□□□□□ -0.28
SSA1YAL005C FMO1P38866 432 aa13.27□□□□□ -0.28
SSA1YAL005C AXL1P40851 1208 aa13.27□□□□□ -0.28
SSA1YAL005C MRS2Q01926 470 aa13.27□□□□□ -0.28
SSA1YAL005C YPR172WQ06608 200 aa13.27□□□□□ -0.28
SSA1YAL005C SAM4Q08985 325 aaKnown RBP13.27□□□□□ -0.28
SSA1YAL005C PHO5P00635 467 aa13.27□□□□□ -0.29
SSA1YAL005C MPT5P39016 859 aaKnown RBP RIP-Chip data13.27□□□□□ -0.29not detected
SSA1YAL005C GAT1P43574 510 aa13.27□□□□□ -0.29
SSA1YAL005C NIS1P53939 407 aa13.27□□□□□ -0.29
SSA1YAL005C RCO1Q04779 684 aa13.27□□□□□ -0.29
SSA1YAL005C OPI10Q08202 246 aa13.27□□□□□ -0.29
SSA1YAL005C FMP27Q06179 2628 aa13.26□□□□□ -0.29
SSA1YAL005C BAS1P22035 811 aa13.26□□□□□ -0.29
SSA1YAL005C TFC3P34111 1160 aa13.26□□□□□ -0.29
SSA1YAL005C HSM3P38348 480 aa13.26□□□□□ -0.29
SSA1YAL005C CYC2P38909 366 aa13.26□□□□□ -0.29
SSA1YAL005C PRM2P40534 656 aa13.26□□□□□ -0.29
SSA1YAL005C CLD1P53264 445 aa13.26□□□□□ -0.29
SSA1YAL005C RNH70P53331 553 aa13.26□□□□□ -0.29
SSA1YAL005C NPL3Q01560 414 aaKnown RBP RIP-Chip data13.26□□□□□ -0.29not detected
SSA1YAL005C SSL1Q04673 461 aaPredicted RBP13.26□□□□□ -0.29
SSA1YAL005C CHL1P22516 861 aaPredicted RBP13.25□□□□□ -0.29
SSA1YAL005C HCM1P25364 564 aa13.25□□□□□ -0.29
SSA1YAL005C CCR4P31384 837 aaKnown RBP13.25□□□□□ -0.29
SSA1YAL005C ARC1P46672 376 aaKnown RBP13.25□□□□□ -0.29
SSA1YAL005C TIS11P47977 285 aa13.25□□□□□ -0.29
SSA1YAL005C TEL2P53038 688 aa13.25□□□□□ -0.29
SSA1YAL005C RMI1Q02685 241 aa13.25□□□□□ -0.29
SSA1YAL005C NAG1Q8TGN9 163 aa13.25□□□□□ -0.29
SSA1YAL005C TOR2P32600 2474 aaKnown RBP13.25□□□□□ -0.29
SSA1YAL005C RHO2P06781 192 aa13.25□□□□□ -0.29
SSA1YAL005C CPA1P07258 411 aaKnown RBP13.25□□□□□ -0.29
SSA1YAL005C RPB4P20433 221 aaPredicted RBP13.25□□□□□ -0.29
SSA1YAL005C YCR090CP25654 182 aaKnown RBP13.25□□□□□ -0.29
SSA1YAL005C TIP20P33891 701 aa13.25□□□□□ -0.29
SSA1YAL005C GMH1P36125 273 aa13.25□□□□□ -0.29
SSA1YAL005C HXT5P38695 592 aa13.25□□□□□ -0.29
SSA1YAL005C MRX1P40050 688 aa13.25□□□□□ -0.29
SSA1YAL005C GCD14P46959 383 aaPredicted RBP13.25□□□□□ -0.29
SSA1YAL005C SNO2P53823 222 aa13.25□□□□□ -0.29
SSA1YAL005C NHP10Q03435 203 aa13.25□□□□□ -0.29
SSA1YAL005C TVP15Q03860 143 aa13.25□□□□□ -0.29
SSA1YAL005C SEC10Q06245 871 aa13.25□□□□□ -0.29
SSA1YAL005C YOR012WQ12351 137 aa13.25□□□□□ -0.29
SSA1YAL005C NOT5Q12514 560 aaPredicted RBP13.25□□□□□ -0.29
SSA1YAL005C GIP4P39732 760 aa13.24□□□□□ -0.29
SSA1YAL005C ARX1Q03862 593 aaKnown RBP13.24□□□□□ -0.29
SSA1YAL005C EMI1Q04406 187 aa13.24□□□□□ -0.29
SSA1YAL005C RSC3Q06639 885 aa13.24□□□□□ -0.29
SSA1YAL005C GTT2Q12390 233 aa13.24□□□□□ -0.29
SSA1YAL005C RPC19P28000 142 aaKnown RBP13.23□□□□□ -0.29
SSA1YAL005C VMA13P41807 478 aaKnown RBP13.23□□□□□ -0.29
SSA1YAL005C ALR1Q08269 859 aa13.23□□□□□ -0.29
SSA1YAL005C RIB2Q12362 591 aaKnown RBP13.23□□□□□ -0.29
SSA1YAL005C YPT6Q99260 215 aa13.23□□□□□ -0.29
SSA1YAL005C YKR104WP0CE69 306 aa13.23□□□□□ -0.29
SSA1YAL005C SKT5P34226 696 aa13.23□□□□□ -0.29
SSA1YAL005C YHR020WP38708 688 aaKnown RBP13.23□□□□□ -0.29
SSA1YAL005C SEC31P38968 1273 aaKnown RBP13.23□□□□□ -0.29
SSA1YAL005C SSN3P39073 555 aa13.23□□□□□ -0.29
SSA1YAL005C YHB1P39676 399 aaKnown RBP13.23□□□□□ -0.29
SSA1YAL005C COQ5P49017 307 aa13.23□□□□□ -0.29
SSA1YAL005C NOB1Q08444 459 aaKnown RBP13.23□□□□□ -0.29
SSA1YAL005C TRM8Q12009 286 aa13.23□□□□□ -0.29
SSA1YAL005C SEM1O94742 89 aa13.22□□□□□ -0.29
SSA1YAL005C OXP1P28273 1286 aa13.22□□□□□ -0.29
SSA1YAL005C NUP120P35729 1037 aa13.22□□□□□ -0.29
SSA1YAL005C HSE1P38753 452 aa13.22□□□□□ -0.29
SSA1YAL005C COA1P40452 197 aa13.22□□□□□ -0.29
SSA1YAL005C YGL108CP53139 140 aa13.22□□□□□ -0.29
SSA1YAL005C ART10P18634 518 aaKnown RBP13.21□□□□□ -0.29
SSA1YAL005C NIP1P32497 812 aaKnown RBP13.21□□□□□ -0.29
SSA1YAL005C YML119WQ03208 357 aa13.21□□□□□ -0.29
SSA1YAL005C ARG7Q04728 441 aa13.21□□□□□ -0.29
Retrieved 100 of 5,963 RNA–protein pairs in 30.8 ms