RNA–Protein interactions for RNA: LSR1

LSR1, Transcript of U2 spliceosomal RNA (U2 snRNA), component of the spliceosome, yeastyeast

Gene LSR1, Length 1,175 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSR1LSR1 GTR2P53290 341 aa8.63□□□□□ -1.03
LSR1LSR1 YML131WQ03102 365 aa8.63□□□□□ -1.03
LSR1LSR1 YDR109CQ04585 715 aa8.63□□□□□ -1.03
LSR1LSR1 YDL121CQ07541 149 aa8.63□□□□□ -1.03
LSR1LSR1 ESC8Q08119 714 aa8.63□□□□□ -1.03
LSR1LSR1 TRE2Q08693 809 aa8.63□□□□□ -1.03
LSR1LSR1 NUS1Q12063 375 aa8.63□□□□□ -1.03
LSR1LSR1 SUT2Q12286 268 aa8.63□□□□□ -1.03
LSR1LSR1 APM4Q99186 491 aa8.63□□□□□ -1.03
LSR1LSR1 SEM1O94742 89 aa8.62□□□□□ -1.03
LSR1LSR1 RHO1P06780 209 aaKnown RBP8.62□□□□□ -1.03
LSR1LSR1 BCY1P07278 416 aaKnown RBP8.62□□□□□ -1.03
LSR1LSR1 SEC53P07283 254 aaKnown RBP8.62□□□□□ -1.03
LSR1LSR1 KSS1P14681 368 aa8.62□□□□□ -1.03
LSR1LSR1 AMD1P15274 810 aaKnown RBP8.62□□□□□ -1.03
LSR1LSR1 AAT2P23542 418 aaKnown RBP8.62□□□□□ -1.03
LSR1LSR1 ERG6P25087 383 aaKnown RBP8.62□□□□□ -1.03
LSR1LSR1 STE14P32584 239 aa8.62□□□□□ -1.03
LSR1LSR1 TOM20P35180 183 aa8.62□□□□□ -1.03
LSR1LSR1 SPC42P36094 363 aa8.62□□□□□ -1.03
LSR1LSR1 TIF11P38912 153 aaKnown RBP8.62□□□□□ -1.03
LSR1LSR1 GIP4P39732 760 aa8.62□□□□□ -1.03
LSR1LSR1 MET18P40469 1032 aa8.62□□□□□ -1.03
LSR1LSR1 IST3P40565 148 aaPredicted RBP8.62□□□□□ -1.03
LSR1LSR1 OPT1P40897 799 aa8.62□□□□□ -1.03
LSR1LSR1 RBL2P48606 106 aaKnown RBP8.62□□□□□ -1.03
LSR1LSR1 YGR053CP53234 283 aa8.62□□□□□ -1.03
LSR1LSR1 IBD2P53892 351 aa8.62□□□□□ -1.03
LSR1LSR1 SPO20Q04359 397 aa8.62□□□□□ -1.03
LSR1LSR1 NDL1Q06568 189 aa8.62□□□□□ -1.03
LSR1LSR1 REH1Q06709 432 aa8.62□□□□□ -1.03
LSR1LSR1 SGT1Q08446 395 aa8.62□□□□□ -1.03
LSR1LSR1 GPB1Q08886 897 aa8.62□□□□□ -1.03
LSR1LSR1 PGC1Q08959 321 aa8.62□□□□□ -1.03
LSR1LSR1 YKL018C-AQ3E7A7 99 aa8.62□□□□□ -1.03
LSR1LSR1 SAS5Q99314 248 aa8.62□□□□□ -1.03
LSR1LSR1 FAR1P21268 830 aa8.61□□□□□ -1.03
LSR1LSR1 RVS161P25343 265 aaKnown RBP8.61□□□□□ -1.03
LSR1LSR1 POL4P25615 582 aa8.61□□□□□ -1.03
LSR1LSR1 YCR099CP25657 155 aa8.61□□□□□ -1.03
LSR1LSR1 GUT2P32191 649 aa8.61□□□□□ -1.03
LSR1LSR1 CYS4P32582 507 aaKnown RBP8.61□□□□□ -1.03
LSR1LSR1 SSE2P32590 693 aaKnown RBP8.61□□□□□ -1.03
LSR1LSR1 PTH2P34222 208 aa8.61□□□□□ -1.03
LSR1LSR1 HMT1P38074 348 aa8.61□□□□□ -1.03
LSR1LSR1 URA8P38627 578 aaPredicted RBP8.61□□□□□ -1.03
LSR1LSR1 FAD1P38913 306 aa8.61□□□□□ -1.03
LSR1LSR1 ARH1P48360 493 aa8.61□□□□□ -1.03
LSR1LSR1 SFB2P53953 876 aa8.61□□□□□ -1.03
LSR1LSR1 YNL018CP53976 612 aa8.61□□□□□ -1.03
LSR1LSR1 PIR3Q03180 325 aa8.61□□□□□ -1.03
LSR1LSR1 GOT1Q03554 138 aa8.61□□□□□ -1.03
LSR1LSR1 TAF12Q03761 539 aa8.61□□□□□ -1.03
LSR1LSR1 YDR239CQ03780 787 aa8.61□□□□□ -1.03
LSR1LSR1 RPN9Q04062 393 aaKnown RBP8.61□□□□□ -1.03
LSR1LSR1 FMP42Q04991 504 aa8.61□□□□□ -1.03
LSR1LSR1 YCS4Q06156 1176 aa8.61□□□□□ -1.03
LSR1LSR1 ULA1Q12059 462 aa8.61□□□□□ -1.03
LSR1LSR1 YCK2P23292 546 aaKnown RBP8.6□□□□□ -1.03
LSR1LSR1 FUB1P25659 250 aa8.6□□□□□ -1.03
LSR1LSR1 RPN2P32565 945 aaKnown RBP8.6□□□□□ -1.03
LSR1LSR1 RIB7P33312 244 aa8.6□□□□□ -1.03
LSR1LSR1 NUF2P33895 451 aa8.6□□□□□ -1.03
LSR1LSR1 SKT5P34226 696 aa8.6□□□□□ -1.03
LSR1LSR1 TFA2P36145 328 aa8.6□□□□□ -1.03
LSR1LSR1 POL12P38121 705 aaPredicted RBP8.6□□□□□ -1.03
LSR1LSR1 SRP72P38688 640 aaKnown RBP8.6□□□□□ -1.03
LSR1LSR1 GOS1P38736 223 aa8.6□□□□□ -1.03
LSR1LSR1 STB1P42845 420 aa8.6□□□□□ -1.03
LSR1LSR1 PTR3P43606 678 aa8.6□□□□□ -1.03
LSR1LSR1 BUD13P46947 266 aaPredicted RBP8.6□□□□□ -1.03
LSR1LSR1 MPS3P47069 682 aa8.6□□□□□ -1.03
LSR1LSR1 RPL34AP87262 121 aaPredicted RBP8.6□□□□□ -1.03
LSR1LSR1 PRP38Q00723 242 aaPredicted RBP8.6□□□□□ -1.03
LSR1LSR1 MTD1Q02046 320 aaKnown RBP8.6□□□□□ -1.03
LSR1LSR1 RIF2Q06208 395 aa8.6□□□□□ -1.03
LSR1LSR1 LDB18Q07887 179 aa8.6□□□□□ -1.03
LSR1LSR1 LOT6Q07923 191 aa8.6□□□□□ -1.03
LSR1LSR1 YLR049CQ12110 428 aa8.6□□□□□ -1.03
LSR1LSR1 HUA2Q12134 243 aa8.6□□□□□ -1.03
LSR1LSR1 UPC2Q12151 913 aa8.6□□□□□ -1.03
LSR1LSR1 SVS1Q12254 260 aa8.6□□□□□ -1.03
LSR1LSR1 YLR422WQ06409 1932 aa8.59□□□□□ -1.03
LSR1LSR1 HEM2P05373 342 aa8.59□□□□□ -1.03
LSR1LSR1 RPB4P20433 221 aaPredicted RBP8.59□□□□□ -1.03
LSR1LSR1 CTR86P25355 563 aa8.59□□□□□ -1.03
LSR1LSR1 CIN8P27895 1000 aa8.59□□□□□ -1.03
LSR1LSR1 BRF1P29056 596 aa8.59□□□□□ -1.03
LSR1LSR1 FUN30P31380 1131 aa8.59□□□□□ -1.03
LSR1LSR1 RPT5P33297 434 aaKnown RBP8.59□□□□□ -1.03
LSR1LSR1 WHI3P34761 661 aaKnown RBP8.59□□□□□ -1.03
LSR1LSR1 LRG1P35688 1017 aa8.59□□□□□ -1.03
LSR1LSR1 CAF4P36130 643 aa8.59□□□□□ -1.03
LSR1LSR1 ECM13P38195 257 aa8.59□□□□□ -1.03
LSR1LSR1 YBR138CP38277 524 aa8.59□□□□□ -1.03
LSR1LSR1 GND1P38720 489 aaKnown RBP8.59□□□□□ -1.03
LSR1LSR1 YHL041WP38730 149 aa8.59□□□□□ -1.03
LSR1LSR1 ETP1P38748 585 aaKnown RBP8.59□□□□□ -1.03
LSR1LSR1 DMA1P38823 416 aa8.59□□□□□ -1.03
LSR1LSR1 YHR218WP38899 603 aa8.59□□□□□ -1.03
Retrieved 100 of 5,963 RNA–protein pairs in 19.3 ms