RNA–Protein interactions for RNA: ENST00000584168.5

CDK5RAP3-232, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 2,684 nt, Biotype retained intron.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-232ENST00000584168 SF3B2Q13435 895 aaKnown RBP13.3□□□□□ -0.28
CDK5RAP3-232ENST00000584168 NFIXQ14938 502 aa13.3□□□□□ -0.28
CDK5RAP3-232ENST00000584168 CYB5D1Q6P9G0 228 aa13.3□□□□□ -0.28
CDK5RAP3-232ENST00000584168 RUFY2Q8WXA3 655 aa13.3□□□□□ -0.28
CDK5RAP3-232ENST00000584168 A0A1B0GVG6 124 aa13.29□□□□□ -0.28
CDK5RAP3-232ENST00000584168 EIF3HO15372 352 aaKnown RBP eCLIP13.29□□□□□ -0.282e-7■■□□□ 11.6
CDK5RAP3-232ENST00000584168 E2F6O75461 281 aa13.29□□□□□ -0.28
CDK5RAP3-232ENST00000584168 CSF1RP07333 972 aa13.29□□□□□ -0.28
CDK5RAP3-232ENST00000584168 MYBPC3Q14896 1274 aa13.29□□□□□ -0.28
CDK5RAP3-232ENST00000584168 KIF4BQ2VIQ3 1234 aa13.29□□□□□ -0.28
CDK5RAP3-232ENST00000584168 GNPTABQ3T906 1256 aa13.29□□□□□ -0.28
CDK5RAP3-232ENST00000584168 ACCSLQ4AC99 568 aa13.29□□□□□ -0.28
CDK5RAP3-232ENST00000584168 PI16Q6UXB8 463 aa13.29□□□□□ -0.28
CDK5RAP3-232ENST00000584168 CDC37L1Q7L3B6 337 aa13.29□□□□□ -0.28
CDK5RAP3-232ENST00000584168 YTHDF3Q7Z739 585 aaKnown RBP13.29□□□□□ -0.28
CDK5RAP3-232ENST00000584168 TMEM110Q86TL2 294 aa13.29□□□□□ -0.28
CDK5RAP3-232ENST00000584168 CCDC170Q8IYT3 715 aa13.29□□□□□ -0.28
CDK5RAP3-232ENST00000584168 HDAC6Q9UBN7 1215 aa13.29□□□□□ -0.28
CDK5RAP3-232ENST00000584168 ZNF652Q9Y2D9 606 aa13.29□□□□□ -0.28
CDK5RAP3-232ENST00000584168 CYP46A1Q9Y6A2 500 aa13.29□□□□□ -0.28
CDK5RAP3-232ENST00000584168 ABCC12Q96J65 1359 aa13.29□□□□□ -0.28
CDK5RAP3-232ENST00000584168 PDLIM1O00151 329 aa13.29□□□□□ -0.28
CDK5RAP3-232ENST00000584168 SFPQP23246 707 aaKnown RBP eCLIP13.29□□□□□ -0.28
CDK5RAP3-232ENST00000584168 SYCP3Q8IZU3 236 aa13.29□□□□□ -0.28
CDK5RAP3-232ENST00000584168 GALNT15Q8N3T1 639 aa13.29□□□□□ -0.28
CDK5RAP3-232ENST00000584168 NSMCE1Q8WV22 266 aa13.29□□□□□ -0.28
CDK5RAP3-232ENST00000584168 TEKT1Q969V4 418 aa13.29□□□□□ -0.28
CDK5RAP3-232ENST00000584168 FAM81BQ96LP2 452 aa13.29□□□□□ -0.28
CDK5RAP3-232ENST00000584168 PNKPQ96T60 521 aa13.29□□□□□ -0.28
CDK5RAP3-232ENST00000584168 EHD4Q9H223 541 aa13.29□□□□□ -0.28
CDK5RAP3-232ENST00000584168 LRRIQ3A6PVS8 624 aaPredicted RBP13.28□□□□□ -0.28
CDK5RAP3-232ENST00000584168 B4DLN1 442 aa13.28□□□□□ -0.28
CDK5RAP3-232ENST00000584168 F8VZ95 297 aa13.28□□□□□ -0.28
CDK5RAP3-232ENST00000584168 LINGO3P0C6S8 592 aa13.28□□□□□ -0.28
CDK5RAP3-232ENST00000584168 METTL24Q5JXM2 366 aa13.28□□□□□ -0.28
CDK5RAP3-232ENST00000584168 RBM43Q6ZSC3 357 aaKnown RBP13.28□□□□□ -0.28
CDK5RAP3-232ENST00000584168 NECAB1Q8N987 351 aa13.28□□□□□ -0.28
CDK5RAP3-232ENST00000584168 NACA2Q9H009 215 aa13.28□□□□□ -0.28
CDK5RAP3-232ENST00000584168 ZSWIM6Q9HCJ5 1215 aa13.28□□□□□ -0.28
CDK5RAP3-232ENST00000584168 ECHDC1Q9NTX5 307 aa13.28□□□□□ -0.28
CDK5RAP3-232ENST00000584168 TBC1D7Q9P0N9 293 aa13.28□□□□□ -0.28
CDK5RAP3-232ENST00000584168 USP42Q9H9J4 1324 aaKnown RBP13.28□□□□□ -0.28
CDK5RAP3-232ENST00000584168 SYNRGQ9UMZ2 1314 aa13.28□□□□□ -0.28
CDK5RAP3-232ENST00000584168 BCORQ6W2J9 1755 aa13.28□□□□□ -0.28
CDK5RAP3-232ENST00000584168 PPFIA3O75145 1194 aa13.28□□□□□ -0.28
CDK5RAP3-232ENST00000584168 SSBP05455 408 aaKnown RBP eCLIP13.28□□□□□ -0.28
CDK5RAP3-232ENST00000584168 ME3Q16798 604 aa13.28□□□□□ -0.28
CDK5RAP3-232ENST00000584168 Q4G0T1 1027 aa13.28□□□□□ -0.28
CDK5RAP3-232ENST00000584168 MSANTD4Q8NCY6 345 aa13.28□□□□□ -0.28
CDK5RAP3-232ENST00000584168 FAM76AQ8TAV0 307 aa13.28□□□□□ -0.28
CDK5RAP3-232ENST00000584168 DTNBP1Q96EV8 351 aa13.28□□□□□ -0.28
CDK5RAP3-232ENST00000584168 ZSCAN31Q96LW9 406 aaPredicted RBP13.28□□□□□ -0.28
CDK5RAP3-232ENST00000584168 MTA3Q9BTC8 594 aa13.28□□□□□ -0.28
CDK5RAP3-232ENST00000584168 HOOK1Q9UJC3 728 aaKnown RBP13.28□□□□□ -0.28
CDK5RAP3-232ENST00000584168 FRMD4BQ9Y2L6 1034 aa13.28□□□□□ -0.28
CDK5RAP3-232ENST00000584168 COL4A1P02462 1669 aa13.28□□□□□ -0.28
CDK5RAP3-232ENST00000584168 BECN2A8MW95 431 aa13.27□□□□□ -0.28
CDK5RAP3-232ENST00000584168 PPFIA1Q13136 1202 aa13.27□□□□□ -0.28
CDK5RAP3-232ENST00000584168 ARMCX5Q6P1M9 558 aa13.27□□□□□ -0.28
CDK5RAP3-232ENST00000584168 DHRS1Q96LJ7 313 aa13.27□□□□□ -0.28
CDK5RAP3-232ENST00000584168 SH2B1Q9NRF2 756 aaPredicted RBP13.27□□□□□ -0.28
CDK5RAP3-232ENST00000584168 MYO1AQ9UBC5 1043 aa13.27□□□□□ -0.28
CDK5RAP3-232ENST00000584168 IQSEC3Q9UPP2 1182 aaPredicted RBP13.27□□□□□ -0.28
CDK5RAP3-232ENST00000584168 LIN7AO14910 233 aaPredicted RBP13.27□□□□□ -0.29
CDK5RAP3-232ENST00000584168 GYS1P13807 737 aa13.27□□□□□ -0.29
CDK5RAP3-232ENST00000584168 CHMP4BP1P59074 171 aa13.27□□□□□ -0.29
CDK5RAP3-232ENST00000584168 ST3GAL1Q11201 340 aa13.27□□□□□ -0.29
CDK5RAP3-232ENST00000584168 CCDC80Q76M96 950 aa13.27□□□□□ -0.29
CDK5RAP3-232ENST00000584168 COL23A1Q86Y22 540 aaPredicted RBP13.27□□□□□ -0.29
CDK5RAP3-232ENST00000584168 CCDC125Q86Z20 511 aa13.27□□□□□ -0.29
CDK5RAP3-232ENST00000584168 IQCF2Q8IXL9 164 aa13.27□□□□□ -0.29
CDK5RAP3-232ENST00000584168 KCNN1Q92952 543 aa13.27□□□□□ -0.29
CDK5RAP3-232ENST00000584168 CAPS2Q9BXY5 557 aa13.27□□□□□ -0.29
CDK5RAP3-232ENST00000584168 ZNF510Q9Y2H8 683 aa13.27□□□□□ -0.29
CDK5RAP3-232ENST00000584168 TAF1P21675 1872 aa13.27□□□□□ -0.29
CDK5RAP3-232ENST00000584168 ANKRD36CQ5JPF3 1778 aa13.27□□□□□ -0.29
CDK5RAP3-232ENST00000584168 RGL2O15211 777 aa13.26□□□□□ -0.29
CDK5RAP3-232ENST00000584168 ZKSCAN1P17029 563 aaPredicted RBP13.26□□□□□ -0.29
CDK5RAP3-232ENST00000584168 ADRA2BP18089 450 aa13.26□□□□□ -0.29
CDK5RAP3-232ENST00000584168 BAG6P46379 1132 aa13.26□□□□□ -0.29
CDK5RAP3-232ENST00000584168 TMED1Q13445 227 aa13.26□□□□□ -0.29
CDK5RAP3-232ENST00000584168 NECTIN1Q15223 517 aa13.26□□□□□ -0.29
CDK5RAP3-232ENST00000584168 LARP1BQ659C4 914 aaKnown RBP13.26□□□□□ -0.29
CDK5RAP3-232ENST00000584168 FUKQ8N0W3 1084 aa13.26□□□□□ -0.29
CDK5RAP3-232ENST00000584168 CELF1Q92879 486 aaKnown RBP13.26□□□□□ -0.29
CDK5RAP3-232ENST00000584168 TM6SF1Q9BZW5 370 aa13.26□□□□□ -0.29
CDK5RAP3-232ENST00000584168 VIPAS39Q9H9C1 493 aa13.26□□□□□ -0.29
CDK5RAP3-232ENST00000584168 DACT1Q9NYF0 836 aa13.26□□□□□ -0.29
CDK5RAP3-232ENST00000584168 SCN7AQ01118 1682 aa13.26□□□□□ -0.29
CDK5RAP3-232ENST00000584168 GRIN2DO15399 1336 aa13.26□□□□□ -0.29
CDK5RAP3-232ENST00000584168 GOLGA6L7A0A1B0GV03 622 aa13.26□□□□□ -0.29
CDK5RAP3-232ENST00000584168 NDUFAB1O14561 156 aa13.26□□□□□ -0.29
CDK5RAP3-232ENST00000584168 SMIM24O75264 130 aa13.26□□□□□ -0.29
CDK5RAP3-232ENST00000584168 ATP5JP18859 108 aa13.26□□□□□ -0.29
CDK5RAP3-232ENST00000584168 RPL13P26373 211 aaKnown RBP13.26□□□□□ -0.29
CDK5RAP3-232ENST00000584168 SCARF1Q14162 830 aa13.26□□□□□ -0.29
CDK5RAP3-232ENST00000584168 RNF187Q5TA31 235 aaPredicted RBP13.26□□□□□ -0.29
CDK5RAP3-232ENST00000584168 FERMT3Q86UX7 667 aa13.26□□□□□ -0.29
CDK5RAP3-232ENST00000584168 RASSF8Q8NHQ8 419 aa13.26□□□□□ -0.29
CDK5RAP3-232ENST00000584168 RMDN2Q96LZ7 410 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 138.8 ms