RNA–Protein interactions for RNA: ENST00000558026.1

IGKV2D-28-202, Transcript of immunoglobulin kappa variable 2D-28, humanhuman

BASIC

Gene IGKV2D-28, Length 306 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2D-28-202ENST00000558026 FAM184BQ9ULE4 1060 aa11.94□□□□□ -0.5
IGKV2D-28-202ENST00000558026 TRPC6Q9Y210 931 aa11.94□□□□□ -0.5
IGKV2D-28-202ENST00000558026 CNPY2Q9Y2B0 182 aa11.94□□□□□ -0.5
IGKV2D-28-202ENST00000558026 MCM3APO60318 1980 aa11.93□□□□□ -0.5
IGKV2D-28-202ENST00000558026 TMEM221A6NGB7 291 aa11.93□□□□□ -0.5
IGKV2D-28-202ENST00000558026 H0Y858 1186 aa11.93□□□□□ -0.5
IGKV2D-28-202ENST00000558026 M0R296 226 aa11.93□□□□□ -0.5
IGKV2D-28-202ENST00000558026 B4GALT4O60513 344 aa11.93□□□□□ -0.5
IGKV2D-28-202ENST00000558026 DUSP11O75319 330 aaKnown RBP11.93□□□□□ -0.5
IGKV2D-28-202ENST00000558026 USP14P54578 494 aa11.93□□□□□ -0.5
IGKV2D-28-202ENST00000558026 VCPP55072 806 aaKnown RBP11.93□□□□□ -0.5
IGKV2D-28-202ENST00000558026 ZNF792Q3KQV3 632 aa11.93□□□□□ -0.5
IGKV2D-28-202ENST00000558026 TMCO2Q7Z6W1 182 aaPredicted RBP11.93□□□□□ -0.5
IGKV2D-28-202ENST00000558026 FOXP4Q8IVH2 680 aaPredicted RBP11.93□□□□□ -0.5
IGKV2D-28-202ENST00000558026 ADHFE1Q8IWW8 467 aa11.93□□□□□ -0.5
IGKV2D-28-202ENST00000558026 SUGP1Q8IWZ8 645 aaKnown RBP11.93□□□□□ -0.5
IGKV2D-28-202ENST00000558026 TGFBRAP1Q8WUH2 860 aa11.93□□□□□ -0.5
IGKV2D-28-202ENST00000558026 EDAQ92838 391 aa11.93□□□□□ -0.5
IGKV2D-28-202ENST00000558026 SLC9A7Q96T83 725 aa11.93□□□□□ -0.5
IGKV2D-28-202ENST00000558026 MMP19Q99542 508 aa11.93□□□□□ -0.5
IGKV2D-28-202ENST00000558026 TANGO6Q9C0B7 1094 aa11.93□□□□□ -0.5
IGKV2D-28-202ENST00000558026 TLR9Q9NR96 1032 aa11.93□□□□□ -0.5
IGKV2D-28-202ENST00000558026 ZHX1Q9UKY1 873 aaPredicted RBP11.93□□□□□ -0.5
IGKV2D-28-202ENST00000558026 GVINP1Q7Z2Y8 2422 aa11.93□□□□□ -0.5
IGKV2D-28-202ENST00000558026 ZFHX4Q86UP3 3567 aa11.93□□□□□ -0.5
IGKV2D-28-202ENST00000558026 COL11A1P12107 1806 aaPredicted RBP11.93□□□□□ -0.5
IGKV2D-28-202ENST00000558026 GRIN2DO15399 1336 aa11.92□□□□□ -0.5
IGKV2D-28-202ENST00000558026 TET1Q8NFU7 2136 aa11.92□□□□□ -0.5
IGKV2D-28-202ENST00000558026 PKD1L2Q7Z442 2459 aa11.92□□□□□ -0.5
IGKV2D-28-202ENST00000558026 PRR23AA6NEV1 266 aa11.92□□□□□ -0.5
IGKV2D-28-202ENST00000558026 CTAGE5O15320 804 aa11.92□□□□□ -0.5
IGKV2D-28-202ENST00000558026 MAP4K4O95819 1239 aaPredicted RBP11.92□□□□□ -0.5
IGKV2D-28-202ENST00000558026 SNAI1O95863 264 aaPredicted RBP11.92□□□□□ -0.5
IGKV2D-28-202ENST00000558026 RFX5P48382 616 aaPredicted RBP11.92□□□□□ -0.5
IGKV2D-28-202ENST00000558026 BEX3Q00994 111 aa11.92□□□□□ -0.5
IGKV2D-28-202ENST00000558026 PUS10Q3MIT2 529 aaKnown RBP11.92□□□□□ -0.5
IGKV2D-28-202ENST00000558026 CXCL17Q6UXB2 119 aa11.92□□□□□ -0.5
IGKV2D-28-202ENST00000558026 TBC1D9Q6ZT07 1266 aa11.92□□□□□ -0.5
IGKV2D-28-202ENST00000558026 RNF135Q8IUD6 432 aa11.92□□□□□ -0.5
IGKV2D-28-202ENST00000558026 SLC43A3Q8NBI5 491 aa11.92□□□□□ -0.5
IGKV2D-28-202ENST00000558026 NSUN4Q96CB9 384 aaKnown RBP11.92□□□□□ -0.5
IGKV2D-28-202ENST00000558026 ATG4CQ96DT6 458 aa11.92□□□□□ -0.5
IGKV2D-28-202ENST00000558026 UPF3BQ9BZI7 483 aaKnown RBP11.92□□□□□ -0.5
IGKV2D-28-202ENST00000558026 SIL1Q9H173 461 aa11.92□□□□□ -0.5
IGKV2D-28-202ENST00000558026 HOXC10Q9NYD6 342 aa11.92□□□□□ -0.5
IGKV2D-28-202ENST00000558026 PRKAG3Q9UGI9 489 aa11.92□□□□□ -0.5
IGKV2D-28-202ENST00000558026 FLT1P17948 1338 aa11.91□□□□□ -0.5
IGKV2D-28-202ENST00000558026 FOCADQ5VW36 1801 aa11.91□□□□□ -0.5
IGKV2D-28-202ENST00000558026 VPS13AQ96RL7 3174 aa11.91□□□□□ -0.5
IGKV2D-28-202ENST00000558026 KIF28PB7ZC32 967 aa11.91□□□□□ -0.5
IGKV2D-28-202ENST00000558026 KIAA1755Q5JYT7 1200 aa11.91□□□□□ -0.5
IGKV2D-28-202ENST00000558026 PI16Q6UXB8 463 aa11.91□□□□□ -0.5
IGKV2D-28-202ENST00000558026 TRIM67Q6ZTA4 783 aa11.91□□□□□ -0.5
IGKV2D-28-202ENST00000558026 EP400NLQ6ZTU2 488 aa11.91□□□□□ -0.5
IGKV2D-28-202ENST00000558026 FBXL6Q8N531 539 aa11.91□□□□□ -0.5
IGKV2D-28-202ENST00000558026 UPF3AQ9H1J1 476 aaKnown RBP11.91□□□□□ -0.5
IGKV2D-28-202ENST00000558026 CHD8Q9HCK8 2581 aa11.91□□□□□ -0.5
IGKV2D-28-202ENST00000558026 CFAP47Q6ZTR5 3102 aa11.91□□□□□ -0.5
IGKV2D-28-202ENST00000558026 SIP14410 1827 aa11.9□□□□□ -0.5
IGKV2D-28-202ENST00000558026 PROB1E7EW31 1015 aa11.9□□□□□ -0.5
IGKV2D-28-202ENST00000558026 RBAK-RBAKDNI3L0D1 243 aa11.9□□□□□ -0.5
IGKV2D-28-202ENST00000558026 LDHCP07864 332 aa11.9□□□□□ -0.5
IGKV2D-28-202ENST00000558026 GJA9P57773 515 aa11.9□□□□□ -0.5
IGKV2D-28-202ENST00000558026 GSTO1P78417 241 aa11.9□□□□□ -0.5
IGKV2D-28-202ENST00000558026 ITGA7Q13683 1181 aa11.9□□□□□ -0.5
IGKV2D-28-202ENST00000558026 PHOSPHO2Q8TCD6 241 aa11.9□□□□□ -0.5
IGKV2D-28-202ENST00000558026 FSD1Q9BTV5 496 aa11.9□□□□□ -0.5
IGKV2D-28-202ENST00000558026 AATFQ9NY61 560 aaKnown RBP eCLIP11.9□□□□□ -0.5
IGKV2D-28-202ENST00000558026 CEP126Q9P2H0 1117 aa11.9□□□□□ -0.5
IGKV2D-28-202ENST00000558026 DIS3Q9Y2L1 958 aaKnown RBP11.9□□□□□ -0.5
IGKV2D-28-202ENST00000558026 PARP14Q460N5 1801 aa11.9□□□□□ -0.5
IGKV2D-28-202ENST00000558026 DMXL1Q9Y485 3027 aa11.89□□□□□ -0.51
IGKV2D-28-202ENST00000558026 PDS5AQ29RF7 1337 aaKnown RBP11.89□□□□□ -0.51
IGKV2D-28-202ENST00000558026 VAMP4O75379 141 aa11.89□□□□□ -0.51
IGKV2D-28-202ENST00000558026 CYP2C9P11712 490 aa11.89□□□□□ -0.51
IGKV2D-28-202ENST00000558026 PTGS1P23219 599 aa11.89□□□□□ -0.51
IGKV2D-28-202ENST00000558026 DSG3P32926 999 aa11.89□□□□□ -0.51
IGKV2D-28-202ENST00000558026 TMEM132BQ14DG7 1078 aa11.89□□□□□ -0.51
IGKV2D-28-202ENST00000558026 MB21D1Q8N884 522 aa11.89□□□□□ -0.51
IGKV2D-28-202ENST00000558026 SPC25Q9HBM1 224 aa11.89□□□□□ -0.51
IGKV2D-28-202ENST00000558026 RAI14Q9P0K7 980 aa11.89□□□□□ -0.51
IGKV2D-28-202ENST00000558026 A0A1W2PRG0 241 aa11.88□□□□□ -0.51
IGKV2D-28-202ENST00000558026 PFKMP08237 780 aa11.88□□□□□ -0.51
IGKV2D-28-202ENST00000558026 ACTN1P12814 892 aa11.88□□□□□ -0.51
IGKV2D-28-202ENST00000558026 GUCY1A2P33402 732 aa11.88□□□□□ -0.51
IGKV2D-28-202ENST00000558026 PSMC6P62333 389 aa11.88□□□□□ -0.51
IGKV2D-28-202ENST00000558026 KCTD2Q14681 263 aa11.88□□□□□ -0.51
IGKV2D-28-202ENST00000558026 PKN1Q16512 942 aa11.88□□□□□ -0.51
IGKV2D-28-202ENST00000558026 CCDC144BQ3MJ40 725 aa11.88□□□□□ -0.51
IGKV2D-28-202ENST00000558026 ACACBO00763 2458 aa11.88□□□□□ -0.51
IGKV2D-28-202ENST00000558026 MYO7AQ13402 2215 aa11.88□□□□□ -0.51
IGKV2D-28-202ENST00000558026 MYH1P12882 1939 aa11.88□□□□□ -0.51
IGKV2D-28-202ENST00000558026 ASTN1O14525 1302 aa11.87□□□□□ -0.51
IGKV2D-28-202ENST00000558026 ATRXP46100 2492 aa11.87□□□□□ -0.51
IGKV2D-28-202ENST00000558026 CHD6Q8TD26 2715 aa11.87□□□□□ -0.51
IGKV2D-28-202ENST00000558026 ZBTB22O15209 634 aa11.87□□□□□ -0.51
IGKV2D-28-202ENST00000558026 FLOT1O75955 427 aa11.87□□□□□ -0.51
IGKV2D-28-202ENST00000558026 ERVK-21P61565 698 aa11.87□□□□□ -0.51
IGKV2D-28-202ENST00000558026 TIMM10P62072 90 aa11.87□□□□□ -0.51
IGKV2D-28-202ENST00000558026 ACVR2BQ13705 512 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms