RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 SLF1Q9BQI6 1058 aa15.92■□□□□ 0.14
CTDSP1-212ENST00000494067 SYNPO2Q9UMS6 1093 aa15.92■□□□□ 0.14
CTDSP1-212ENST00000494067 LAMA3Q16787 3333 aa15.92■□□□□ 0.14
CTDSP1-212ENST00000494067 LAMA4Q16363 1823 aa15.91■□□□□ 0.14
CTDSP1-212ENST00000494067 DNM1LO00429 736 aa15.91■□□□□ 0.14
CTDSP1-212ENST00000494067 SEPT4O43236 478 aa15.91■□□□□ 0.14
CTDSP1-212ENST00000494067 ZBED4O75132 1171 aa15.91■□□□□ 0.14
CTDSP1-212ENST00000494067 TTLL1O95922 423 aa15.91■□□□□ 0.14
CTDSP1-212ENST00000494067 SYN1P17600 705 aa15.91■□□□□ 0.14
CTDSP1-212ENST00000494067 BMP8BP34820 402 aa15.91■□□□□ 0.14
CTDSP1-212ENST00000494067 TFAP4Q01664 338 aa15.91■□□□□ 0.14
CTDSP1-212ENST00000494067 NMIQ13287 307 aaPredicted RBP15.91■□□□□ 0.14
CTDSP1-212ENST00000494067 PLEKHM2Q8IWE5 1019 aa15.91■□□□□ 0.14
CTDSP1-212ENST00000494067 DIS3Q9Y2L1 958 aaKnown RBP15.91■□□□□ 0.14
CTDSP1-212ENST00000494067 TRIOBPQ9H2D6 2365 aa15.91■□□□□ 0.14
CTDSP1-212ENST00000494067 LCTP09848 1927 aa15.9■□□□□ 0.14
CTDSP1-212ENST00000494067 LTBP2Q14767 1821 aa15.9■□□□□ 0.14
CTDSP1-212ENST00000494067 KBTBD13C9JR72 458 aa15.9■□□□□ 0.14
CTDSP1-212ENST00000494067 MYCNP04198 464 aaPredicted RBP15.9■□□□□ 0.14
CTDSP1-212ENST00000494067 TAL1P17542 331 aaPredicted RBP15.9■□□□□ 0.14
CTDSP1-212ENST00000494067 SLC4A3P48751 1232 aa15.9■□□□□ 0.14
CTDSP1-212ENST00000494067 ZNF792Q3KQV3 632 aa15.9■□□□□ 0.14
CTDSP1-212ENST00000494067 GMCL1P1Q8NEA9 526 aa15.9■□□□□ 0.14
CTDSP1-212ENST00000494067 DDX11Q96FC9 970 aa15.9■□□□□ 0.14
CTDSP1-212ENST00000494067 TEX13BQ9BXU2 312 aa15.9■□□□□ 0.14
CTDSP1-212ENST00000494067 PRKAG2Q9UGJ0 569 aa15.9■□□□□ 0.14
CTDSP1-212ENST00000494067 NRBP1Q9UHY1 535 aa15.9■□□□□ 0.14
CTDSP1-212ENST00000494067 ANAPC4Q9UJX5 808 aa15.9■□□□□ 0.14
CTDSP1-212ENST00000494067 ISY1Q9ULR0 285 aaKnown RBP15.9■□□□□ 0.14
CTDSP1-212ENST00000494067 SMCHD1A6NHR9 2005 aa15.89■□□□□ 0.13
CTDSP1-212ENST00000494067 LRRC37A2A6NM11 1700 aa15.89■□□□□ 0.13
CTDSP1-212ENST00000494067 NUCB1Q02818 461 aa15.89■□□□□ 0.13
CTDSP1-212ENST00000494067 SNRNP48Q6IEG0 339 aaKnown RBP15.89■□□□□ 0.13
CTDSP1-212ENST00000494067 CHD1LQ86WJ1 897 aa15.89■□□□□ 0.13
CTDSP1-212ENST00000494067 KIFC2Q96AC6 838 aa15.89■□□□□ 0.13
CTDSP1-212ENST00000494067 FGD4Q96M96 766 aa15.89■□□□□ 0.13
CTDSP1-212ENST00000494067 GDF15Q99988 308 aa15.89■□□□□ 0.13
CTDSP1-212ENST00000494067 RAVER2Q9HCJ3 691 aaKnown RBP15.89■□□□□ 0.13
CTDSP1-212ENST00000494067 HELLSQ9NRZ9 838 aa15.89■□□□□ 0.13
CTDSP1-212ENST00000494067 FEM1BQ9UK73 627 aa15.89■□□□□ 0.13
CTDSP1-212ENST00000494067 MCM3APO60318 1980 aa15.88■□□□□ 0.13
CTDSP1-212ENST00000494067 TSPY2A6NKD2 308 aa15.88■□□□□ 0.13
CTDSP1-212ENST00000494067 SOX1O00570 391 aaPredicted RBP15.88■□□□□ 0.13
CTDSP1-212ENST00000494067 FGAP02671 866 aa15.88■□□□□ 0.13
CTDSP1-212ENST00000494067 FGRP09769 529 aa15.88■□□□□ 0.13
CTDSP1-212ENST00000494067 FDX1P10109 184 aa15.88■□□□□ 0.13
CTDSP1-212ENST00000494067 HSPD1P10809 573 aaKnown RBP15.88■□□□□ 0.13
CTDSP1-212ENST00000494067 NOVP48745 357 aa15.88■□□□□ 0.13
CTDSP1-212ENST00000494067 ALX1Q15699 326 aa15.88■□□□□ 0.13
CTDSP1-212ENST00000494067 GJC2Q5T442 439 aaPredicted RBP15.88■□□□□ 0.13
CTDSP1-212ENST00000494067 SLFN13Q68D06 897 aa15.88■□□□□ 0.13
CTDSP1-212ENST00000494067 CPXCR1Q8N123 301 aa15.88■□□□□ 0.13
CTDSP1-212ENST00000494067 LENG1Q96BZ8 264 aaPredicted RBP15.88■□□□□ 0.13
CTDSP1-212ENST00000494067 LBHD1Q9BQE6 289 aaPredicted RBP15.88■□□□□ 0.13
CTDSP1-212ENST00000494067 UBE2OQ9C0C9 1292 aaKnown RBP15.88■□□□□ 0.13
CTDSP1-212ENST00000494067 RWDD1Q9H446 243 aaPredicted RBP15.88■□□□□ 0.13
CTDSP1-212ENST00000494067 SLC38A10Q9HBR0 1119 aa15.88■□□□□ 0.13
CTDSP1-212ENST00000494067 CNPY2Q9Y2B0 182 aa15.88■□□□□ 0.13
CTDSP1-212ENST00000494067 SUPT16HQ9Y5B9 1047 aaKnown RBP15.88■□□□□ 0.13
CTDSP1-212ENST00000494067 ZNF536O15090 1300 aa15.88■□□□□ 0.13
CTDSP1-212ENST00000494067 DNAJC25-GNG10A0A024R161 153 aa15.87■□□□□ 0.13
CTDSP1-212ENST00000494067 ATP2A1O14983 1001 aa15.87■□□□□ 0.13
CTDSP1-212ENST00000494067 RARBP10826 455 aa15.87■□□□□ 0.13
CTDSP1-212ENST00000494067 SNAP25P60880 206 aa15.87■□□□□ 0.13
CTDSP1-212ENST00000494067 IKQ13123 557 aaPredicted RBP15.87■□□□□ 0.13
CTDSP1-212ENST00000494067 MCMDC2Q4G0Z9 681 aa15.87■□□□□ 0.13
CTDSP1-212ENST00000494067 TICAM2Q86XR7 235 aa15.87■□□□□ 0.13
CTDSP1-212ENST00000494067 TINF2Q9BSI4 451 aa15.87■□□□□ 0.13
CTDSP1-212ENST00000494067 IL25Q9H293 177 aa15.87■□□□□ 0.13
CTDSP1-212ENST00000494067 OSBPL3Q9H4L5 887 aa15.87■□□□□ 0.13
CTDSP1-212ENST00000494067 FBXO40Q9UH90 709 aa15.87■□□□□ 0.13
CTDSP1-212ENST00000494067 TRIM6-TRIM34B2RNG4 842 aa15.86■□□□□ 0.13
CTDSP1-212ENST00000494067 ZNF865P0CJ78 1059 aaPredicted RBP15.86■□□□□ 0.13
CTDSP1-212ENST00000494067 BMP3P12645 472 aa15.86■□□□□ 0.13
CTDSP1-212ENST00000494067 PDE4AP27815 886 aa15.86■□□□□ 0.13
CTDSP1-212ENST00000494067 MAGEA10P43363 369 aaPredicted RBP15.86■□□□□ 0.13
CTDSP1-212ENST00000494067 ATN1P54259 1190 aaPredicted RBP15.86■□□□□ 0.13
CTDSP1-212ENST00000494067 HAND2P61296 217 aa15.86■□□□□ 0.13
CTDSP1-212ENST00000494067 TBC1D10CQ8IV04 446 aa15.86■□□□□ 0.13
CTDSP1-212ENST00000494067 MSL3Q8N5Y2 521 aaKnown RBP15.86■□□□□ 0.13
CTDSP1-212ENST00000494067 CHURC1Q8WUH1 139 aa15.86■□□□□ 0.13
CTDSP1-212ENST00000494067 RILPL2Q969X0 211 aa15.86■□□□□ 0.13
CTDSP1-212ENST00000494067 STX8Q9UNK0 236 aa15.86■□□□□ 0.13
CTDSP1-212ENST00000494067 CCDC171Q6TFL3 1326 aa15.86■□□□□ 0.13
CTDSP1-212ENST00000494067 TMEM232C9JQI7 657 aa15.85■□□□□ 0.13
CTDSP1-212ENST00000494067 ADCY6O43306 1168 aa15.85■□□□□ 0.13
CTDSP1-212ENST00000494067 ORC4O43929 436 aa15.85■□□□□ 0.13
CTDSP1-212ENST00000494067 AKR1A1P14550 325 aa15.85■□□□□ 0.13
CTDSP1-212ENST00000494067 SDSP20132 328 aa15.85■□□□□ 0.13
CTDSP1-212ENST00000494067 MCCP23508 829 aa15.85■□□□□ 0.13
CTDSP1-212ENST00000494067 SLC1A4P43007 532 aa15.85■□□□□ 0.13
CTDSP1-212ENST00000494067 STAT2P52630 851 aa15.85■□□□□ 0.13
CTDSP1-212ENST00000494067 OAZ1P54368 228 aa15.85■□□□□ 0.13
CTDSP1-212ENST00000494067 IRX5P78411 483 aaPredicted RBP15.85■□□□□ 0.13
CTDSP1-212ENST00000494067 IRX6P78412 446 aaPredicted RBP15.85■□□□□ 0.13
CTDSP1-212ENST00000494067 KCTD1Q719H9 257 aa15.85■□□□□ 0.13
CTDSP1-212ENST00000494067 RNF180Q86T96 592 aa15.85■□□□□ 0.13
CTDSP1-212ENST00000494067 FAM160B2Q86V87 743 aa15.85■□□□□ 0.13
CTDSP1-212ENST00000494067 TDHQ8IZJ6 230 aa15.85■□□□□ 0.13
CTDSP1-212ENST00000494067 ANKRD35Q8N283 1001 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms