RNA–Protein interactions for RNA: ENST00000469739.6

TOP3A-203, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,196 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-203ENST00000469739 RTFDC1Q9BY42 306 aaPredicted RBP10.69□□□□□ -0.7
TOP3A-203ENST00000469739 CALCOCO1Q9P1Z2 691 aa10.69□□□□□ -0.7
TOP3A-203ENST00000469739 CTNND2Q9UQB3 1225 aa10.69□□□□□ -0.7
TOP3A-203ENST00000469739 USP17L5A8MUK1 530 aa10.69□□□□□ -0.7
TOP3A-203ENST00000469739 CDC25BP30305 580 aa10.69□□□□□ -0.7
TOP3A-203ENST00000469739 NAPAP54920 295 aa10.69□□□□□ -0.7
TOP3A-203ENST00000469739 DPYDQ12882 1025 aa10.69□□□□□ -0.7
TOP3A-203ENST00000469739 PFKFB3Q16875 520 aaPredicted RBP10.69□□□□□ -0.7
TOP3A-203ENST00000469739 KIAA0825Q8IV33 1275 aa10.69□□□□□ -0.7
TOP3A-203ENST00000469739 PROM2Q8N271 834 aa10.69□□□□□ -0.7
TOP3A-203ENST00000469739 COA7Q96BR5 231 aa10.69□□□□□ -0.7
TOP3A-203ENST00000469739 TMEM260Q9NX78 707 aa10.69□□□□□ -0.7
TOP3A-203ENST00000469739 TTF2Q9UNY4 1162 aaKnown RBP10.69□□□□□ -0.7
TOP3A-203ENST00000469739 GDAQ9Y2T3 454 aa10.69□□□□□ -0.7
TOP3A-203ENST00000469739 BRWD3Q6RI45 1802 aa10.68□□□□□ -0.7
TOP3A-203ENST00000469739 TXNRD1Q16881 649 aa10.68□□□□□ -0.7
TOP3A-203ENST00000469739 RRAGBQ5VZM2 374 aa10.68□□□□□ -0.7
TOP3A-203ENST00000469739 RBM17Q96I25 401 aaKnown RBP10.68□□□□□ -0.7
TOP3A-203ENST00000469739 PIGSQ96S52 555 aa10.68□□□□□ -0.7
TOP3A-203ENST00000469739 MAD2L2Q9UI95 211 aa10.68□□□□□ -0.7
TOP3A-203ENST00000469739 MORC2Q9Y6X9 1032 aaPredicted RBP10.68□□□□□ -0.7
TOP3A-203ENST00000469739 MTF1Q14872 753 aa10.68□□□□□ -0.7
TOP3A-203ENST00000469739 SYCP1Q15431 976 aa10.68□□□□□ -0.7
TOP3A-203ENST00000469739 LRRN4CLQ8ND94 238 aa10.68□□□□□ -0.7
TOP3A-203ENST00000469739 ZC3H12CQ9C0D7 883 aaKnown RBP10.68□□□□□ -0.7
TOP3A-203ENST00000469739 VPS16Q9H269 839 aa10.68□□□□□ -0.7
TOP3A-203ENST00000469739 TRPC5Q9UL62 973 aaPredicted RBP10.68□□□□□ -0.7
TOP3A-203ENST00000469739 FLT1P17948 1338 aa10.68□□□□□ -0.7
TOP3A-203ENST00000469739 MAST2Q6P0Q8 1798 aa10.68□□□□□ -0.7
TOP3A-203ENST00000469739 TULP2O00295 520 aa10.67□□□□□ -0.7
TOP3A-203ENST00000469739 CAPN2P17655 700 aa10.67□□□□□ -0.7
TOP3A-203ENST00000469739 DPP8Q6V1X1 898 aaPredicted RBP10.67□□□□□ -0.7
TOP3A-203ENST00000469739 ZSCAN29Q8IWY8 852 aaPredicted RBP10.67□□□□□ -0.7
TOP3A-203ENST00000469739 HPS3Q969F9 1004 aa10.67□□□□□ -0.7
TOP3A-203ENST00000469739 DNAI1Q9UI46 699 aa10.67□□□□□ -0.7
TOP3A-203ENST00000469739 ZNF215Q9UL58 517 aaPredicted RBP10.67□□□□□ -0.7
TOP3A-203ENST00000469739 TRIM49BA6NDI0 452 aa10.67□□□□□ -0.7
TOP3A-203ENST00000469739 ERICH4A6NGS2 130 aa10.67□□□□□ -0.7
TOP3A-203ENST00000469739 CCNT1O60563 726 aaKnown RBP10.67□□□□□ -0.7
TOP3A-203ENST00000469739 LDHCP07864 332 aa10.67□□□□□ -0.7
TOP3A-203ENST00000469739 TAL1P17542 331 aaPredicted RBP10.67□□□□□ -0.7
TOP3A-203ENST00000469739 SNAP25P60880 206 aa10.67□□□□□ -0.7
TOP3A-203ENST00000469739 KRT27Q7Z3Y8 459 aa10.67□□□□□ -0.7
TOP3A-203ENST00000469739 PPP1R13BQ96KQ4 1090 aa10.67□□□□□ -0.7
TOP3A-203ENST00000469739 MTRQ99707 1265 aa10.67□□□□□ -0.7
TOP3A-203ENST00000469739 MKRN1Q9UHC7 482 aaKnown RBP10.67□□□□□ -0.7
TOP3A-203ENST00000469739 DUOX1Q9NRD9 1551 aa10.67□□□□□ -0.7
TOP3A-203ENST00000469739 A0A0U1RQJ8 604 aa10.67□□□□□ -0.7
TOP3A-203ENST00000469739 APBA3O96018 575 aa10.67□□□□□ -0.7
TOP3A-203ENST00000469739 GSDMDP57764 484 aa10.67□□□□□ -0.7
TOP3A-203ENST00000469739 NFIAQ12857 509 aa10.67□□□□□ -0.7
TOP3A-203ENST00000469739 MORC3Q14149 939 aa10.67□□□□□ -0.7
TOP3A-203ENST00000469739 ZFPM1Q8IX07 1006 aa10.67□□□□□ -0.7
TOP3A-203ENST00000469739 KRT222Q8N1A0 295 aa10.67□□□□□ -0.7
TOP3A-203ENST00000469739 CERS5Q8N5B7 392 aa10.67□□□□□ -0.7
TOP3A-203ENST00000469739 ATRIPQ8WXE1 791 aa10.67□□□□□ -0.7
TOP3A-203ENST00000469739 TNFRSF25Q93038 417 aa10.67□□□□□ -0.7
TOP3A-203ENST00000469739 TRIM34Q9BYJ4 488 aa10.67□□□□□ -0.7
TOP3A-203ENST00000469739 DDX4Q9NQI0 724 aaKnown RBP10.67□□□□□ -0.7
TOP3A-203ENST00000469739 IKBKBO14920 756 aa10.66□□□□□ -0.7
TOP3A-203ENST00000469739 FGRP09769 529 aa10.66□□□□□ -0.7
TOP3A-203ENST00000469739 AKR1B1P15121 316 aa10.66□□□□□ -0.7
TOP3A-203ENST00000469739 STAT6P42226 847 aa10.66□□□□□ -0.7
TOP3A-203ENST00000469739 GSTO1P78417 241 aa10.66□□□□□ -0.7
TOP3A-203ENST00000469739 SBK1Q52WX2 424 aa10.66□□□□□ -0.7
TOP3A-203ENST00000469739 TTBK2Q6IQ55 1244 aa10.66□□□□□ -0.7
TOP3A-203ENST00000469739 IRX2Q9BZI1 471 aaPredicted RBP10.66□□□□□ -0.7
TOP3A-203ENST00000469739 SCAF8Q9UPN6 1271 aaKnown RBP10.66□□□□□ -0.7
TOP3A-203ENST00000469739 DAGLAQ9Y4D2 1042 aa10.66□□□□□ -0.7
TOP3A-203ENST00000469739 IRS2Q9Y4H2 1338 aa10.66□□□□□ -0.7
TOP3A-203ENST00000469739 SMCO2A6NFE2 343 aa10.66□□□□□ -0.7
TOP3A-203ENST00000469739 PPEF1O14829 653 aaPredicted RBP10.66□□□□□ -0.7
TOP3A-203ENST00000469739 ONECUT3O60422 494 aaPredicted RBP10.66□□□□□ -0.7
TOP3A-203ENST00000469739 MMP10P09238 476 aa10.66□□□□□ -0.7
TOP3A-203ENST00000469739 PARP1P09874 1014 aaKnown RBP10.66□□□□□ -0.7
TOP3A-203ENST00000469739 TECP42680 631 aa10.66□□□□□ -0.7
TOP3A-203ENST00000469739 KCTD1Q719H9 257 aa10.66□□□□□ -0.7
TOP3A-203ENST00000469739 KIF18AQ8NI77 898 aa10.66□□□□□ -0.7
TOP3A-203ENST00000469739 USP40Q9NVE5 1235 aa10.66□□□□□ -0.7
TOP3A-203ENST00000469739 POLRMTO00411 1230 aaKnown RBP10.65□□□□□ -0.7
TOP3A-203ENST00000469739 UBA7P41226 1012 aa10.65□□□□□ -0.7
TOP3A-203ENST00000469739 TXKP42681 527 aa10.65□□□□□ -0.7
TOP3A-203ENST00000469739 COL23A1Q86Y22 540 aaPredicted RBP10.65□□□□□ -0.7
TOP3A-203ENST00000469739 BPIFA3Q9BQP9 254 aa10.65□□□□□ -0.7
TOP3A-203ENST00000469739 TSPYL1Q9H0U9 437 aa10.65□□□□□ -0.7
TOP3A-203ENST00000469739 OSBPL5Q9H0X9 879 aaPredicted RBP10.65□□□□□ -0.7
TOP3A-203ENST00000469739 ZSWIM4Q9H7M6 989 aa10.65□□□□□ -0.7
TOP3A-203ENST00000469739 TAB2Q9NYJ8 693 aa10.65□□□□□ -0.7
TOP3A-203ENST00000469739 PCDHA6Q9UN73 950 aa10.65□□□□□ -0.7
TOP3A-203ENST00000469739 PCDHA8Q9Y5H6 950 aa10.65□□□□□ -0.7
TOP3A-203ENST00000469739 CCDC88AQ3V6T2 1871 aa10.65□□□□□ -0.7
TOP3A-203ENST00000469739 ATP2B4P23634 1241 aa10.65□□□□□ -0.7
TOP3A-203ENST00000469739 RHBDL3P58872 404 aa10.65□□□□□ -0.7
TOP3A-203ENST00000469739 ATP2C1P98194 919 aaPredicted RBP10.65□□□□□ -0.7
TOP3A-203ENST00000469739 DGKHQ86XP1 1220 aa10.65□□□□□ -0.7
TOP3A-203ENST00000469739 VSTM4Q8IW00 320 aa10.65□□□□□ -0.7
TOP3A-203ENST00000469739 EPC1Q9H2F5 836 aa10.65□□□□□ -0.7
TOP3A-203ENST00000469739 SYNRGQ9UMZ2 1314 aa10.65□□□□□ -0.7
TOP3A-203ENST00000469739 PCDHA4Q9UN74 947 aa10.65□□□□□ -0.7
TOP3A-203ENST00000469739 LAMB1P07942 1786 aa10.65□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms