RNA–Protein interactions for RNA: ENST00000424751.2

LINC00839-201, long intergenic non-protein coding RNA 839, humanhuman

TSL 2

Gene LINC00839, Length 2,252 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00839-201ENST00000424751 A0A1W2PRG0 241 aa16.35■□□□□ 0.21
LINC00839-201ENST00000424751 PALM3A6NDB9 673 aaPredicted RBP16.35■□□□□ 0.21
LINC00839-201ENST00000424751 CTAGE5O15320 804 aa16.35■□□□□ 0.21
LINC00839-201ENST00000424751 PDHBP11177 359 aa16.35■□□□□ 0.21
LINC00839-201ENST00000424751 ATP2B1P20020 1258 aa16.35■□□□□ 0.21
LINC00839-201ENST00000424751 ECE1P42892 770 aa16.35■□□□□ 0.21
LINC00839-201ENST00000424751 TOB1P50616 345 aaPredicted RBP16.35■□□□□ 0.21
LINC00839-201ENST00000424751 DGKZQ13574 1117 aa16.35■□□□□ 0.21
LINC00839-201ENST00000424751 MYSM1Q5VVJ2 828 aa16.35■□□□□ 0.21
LINC00839-201ENST00000424751 TATDN1Q6P1N9 297 aa16.35■□□□□ 0.21
LINC00839-201ENST00000424751 ZNF771Q7L3S4 317 aaPredicted RBP16.35■□□□□ 0.21
LINC00839-201ENST00000424751 HOMER1Q86YM7 354 aa16.35■□□□□ 0.21
LINC00839-201ENST00000424751 LRRC8AQ8IWT6 810 aa16.35■□□□□ 0.21
LINC00839-201ENST00000424751 DIS3L2Q8IYB7 885 aaKnown RBP16.35■□□□□ 0.21
LINC00839-201ENST00000424751 GLIS2Q9BZE0 524 aaPredicted RBP16.35■□□□□ 0.21
LINC00839-201ENST00000424751 VPS33BQ9H267 617 aa16.35■□□□□ 0.21
LINC00839-201ENST00000424751 ZSCAN16Q9H4T2 348 aaPredicted RBP16.35■□□□□ 0.21
LINC00839-201ENST00000424751 MORC2Q9Y6X9 1032 aaPredicted RBP16.35■□□□□ 0.21
LINC00839-201ENST00000424751 LTBP3Q9NS15 1303 aa16.35■□□□□ 0.21
LINC00839-201ENST00000424751 ATRNL1Q5VV63 1379 aa16.34■□□□□ 0.21
LINC00839-201ENST00000424751 PLIN4Q96Q06 1357 aa16.34■□□□□ 0.21
LINC00839-201ENST00000424751 KLRF2D3W0D1 207 aa16.34■□□□□ 0.21
LINC00839-201ENST00000424751 PRPF3O43395 683 aaKnown RBP16.34■□□□□ 0.21
LINC00839-201ENST00000424751 DDNO94850 711 aaPredicted RBP16.34■□□□□ 0.21
LINC00839-201ENST00000424751 DEXIO95424 95 aa16.34■□□□□ 0.21
LINC00839-201ENST00000424751 MMP1P03956 469 aa16.34■□□□□ 0.21
LINC00839-201ENST00000424751 HIRAP54198 1017 aaPredicted RBP16.34■□□□□ 0.21
LINC00839-201ENST00000424751 RNF26Q9BY78 433 aaPredicted RBP16.34■□□□□ 0.21
LINC00839-201ENST00000424751 EHD4Q9H223 541 aa16.34■□□□□ 0.21
LINC00839-201ENST00000424751 ENTPD3O75355 529 aa16.34■□□□□ 0.21
LINC00839-201ENST00000424751 TOP1P11387 765 aaKnown RBP16.34■□□□□ 0.21
LINC00839-201ENST00000424751 TRIM22Q8IYM9 498 aa16.34■□□□□ 0.21
LINC00839-201ENST00000424751 ACER1Q8TDN7 264 aa16.34■□□□□ 0.21
LINC00839-201ENST00000424751 GOLPH3LQ9H4A5 285 aa16.34■□□□□ 0.21
LINC00839-201ENST00000424751 ZNF280AP59817 542 aaPredicted RBP16.33■□□□□ 0.2
LINC00839-201ENST00000424751 RASA3Q14644 834 aa16.33■□□□□ 0.2
LINC00839-201ENST00000424751 PTPN14Q15678 1187 aa16.33■□□□□ 0.2
LINC00839-201ENST00000424751 FAM151AQ8WW52 585 aa16.33■□□□□ 0.2
LINC00839-201ENST00000424751 DHX36Q9H2U1 1008 aaKnown RBP16.33■□□□□ 0.2
LINC00839-201ENST00000424751 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.33■□□□□ 0.2
LINC00839-201ENST00000424751 SWAP70Q9UH65 585 aa16.33■□□□□ 0.2
LINC00839-201ENST00000424751 CCDC196A0A1B0GTZ2 297 aa16.33■□□□□ 0.2
LINC00839-201ENST00000424751 MARCKSP29966 332 aaPredicted RBP16.33■□□□□ 0.2
LINC00839-201ENST00000424751 TNIP1Q15025 636 aa16.33■□□□□ 0.2
LINC00839-201ENST00000424751 STX1AQ16623 288 aa16.33■□□□□ 0.2
LINC00839-201ENST00000424751 CCDC144BQ3MJ40 725 aa16.33■□□□□ 0.2
LINC00839-201ENST00000424751 WWC2Q6AWC2 1192 aa16.33■□□□□ 0.2
LINC00839-201ENST00000424751 SPICE1Q8N0Z3 855 aa16.33■□□□□ 0.2
LINC00839-201ENST00000424751 KIF18AQ8NI77 898 aa16.33■□□□□ 0.2
LINC00839-201ENST00000424751 ZNF592Q92610 1267 aa16.33■□□□□ 0.2
LINC00839-201ENST00000424751 TEPSINQ96N21 525 aa16.33■□□□□ 0.2
LINC00839-201ENST00000424751 PIGSQ96S52 555 aa16.33■□□□□ 0.2
LINC00839-201ENST00000424751 RBM28Q9NW13 759 aaKnown RBP16.33■□□□□ 0.2
LINC00839-201ENST00000424751 HACL1Q9UJ83 578 aa16.33■□□□□ 0.2
LINC00839-201ENST00000424751 CALM1P0DP23 149 aa16.32■□□□□ 0.2
LINC00839-201ENST00000424751 CALM2P0DP24 149 aa16.32■□□□□ 0.2
LINC00839-201ENST00000424751 CALM3P0DP25 149 aa16.32■□□□□ 0.2
LINC00839-201ENST00000424751 RCAN1P53805 252 aa16.32■□□□□ 0.2
LINC00839-201ENST00000424751 GRIN1Q05586 938 aa16.32■□□□□ 0.2
LINC00839-201ENST00000424751 MTMR14Q8NCE2 650 aa16.32■□□□□ 0.2
LINC00839-201ENST00000424751 ZNF397Q8NF99 534 aaPredicted RBP16.32■□□□□ 0.2
LINC00839-201ENST00000424751 ZNF287Q9HBT7 754 aa16.32■□□□□ 0.2
LINC00839-201ENST00000424751 TTLL1O95922 423 aa16.31■□□□□ 0.2
LINC00839-201ENST00000424751 IQCB1Q15051 598 aa16.31■□□□□ 0.2
LINC00839-201ENST00000424751 ABCB5Q2M3G0 1257 aa16.31■□□□□ 0.2
LINC00839-201ENST00000424751 METTL16Q86W50 562 aaKnown RBP16.31■□□□□ 0.2
LINC00839-201ENST00000424751 PHF20Q9BVI0 1012 aa16.31■□□□□ 0.2
LINC00839-201ENST00000424751 KIF2AO00139 706 aaPredicted RBP16.31■□□□□ 0.2
LINC00839-201ENST00000424751 PARP1P09874 1014 aaKnown RBP16.31■□□□□ 0.2
LINC00839-201ENST00000424751 SCG2P13521 617 aa16.31■□□□□ 0.2
LINC00839-201ENST00000424751 ZYXQ15942 572 aaKnown RBP16.31■□□□□ 0.2
LINC00839-201ENST00000424751 KIF4BQ2VIQ3 1234 aa16.31■□□□□ 0.2
LINC00839-201ENST00000424751 KRT222Q8N1A0 295 aa16.31■□□□□ 0.2
LINC00839-201ENST00000424751 TMOD2Q9NZR1 351 aa16.31■□□□□ 0.2
LINC00839-201ENST00000424751 RNF181Q9P0P0 153 aa16.31■□□□□ 0.2
LINC00839-201ENST00000424751 A0A087WWV3 80 aa16.3■□□□□ 0.2
LINC00839-201ENST00000424751 BECN2A8MW95 431 aa16.3■□□□□ 0.2
LINC00839-201ENST00000424751 PPP1R11O60927 126 aaPredicted RBP16.3■□□□□ 0.2
LINC00839-201ENST00000424751 SKILP12757 684 aa16.3■□□□□ 0.2
LINC00839-201ENST00000424751 SF3A1Q15459 793 aaKnown RBP16.3■□□□□ 0.2
LINC00839-201ENST00000424751 PFKFB3Q16875 520 aaPredicted RBP16.3■□□□□ 0.2
LINC00839-201ENST00000424751 NBPF12Q5TAG4 269 aaPredicted RBP16.3■□□□□ 0.2
LINC00839-201ENST00000424751 NYAP1Q6ZVC0 841 aa16.3■□□□□ 0.2
LINC00839-201ENST00000424751 MAP3K14Q99558 947 aa16.3■□□□□ 0.2
LINC00839-201ENST00000424751 TRIM34Q9BYJ4 488 aa16.3■□□□□ 0.2
LINC00839-201ENST00000424751 CABP5Q9NP86 173 aa16.3■□□□□ 0.2
LINC00839-201ENST00000424751 PCDHB6Q9Y5E3 794 aa16.3■□□□□ 0.2
LINC00839-201ENST00000424751 NPM3O75607 178 aaKnown RBP16.3■□□□□ 0.2
LINC00839-201ENST00000424751 LMNB1P20700 586 aa16.3■□□□□ 0.2
LINC00839-201ENST00000424751 AKAP17AQ02040 695 aaKnown RBP16.3■□□□□ 0.2
LINC00839-201ENST00000424751 SPECC1Q5M775 1068 aa16.3■□□□□ 0.2
LINC00839-201ENST00000424751 ANGEL2Q5VTE6 544 aaKnown RBP16.3■□□□□ 0.2
LINC00839-201ENST00000424751 HEATR3Q7Z4Q2 680 aa16.3■□□□□ 0.2
LINC00839-201ENST00000424751 FOXP4Q8IVH2 680 aaPredicted RBP16.3■□□□□ 0.2
LINC00839-201ENST00000424751 ERCC4Q92889 916 aaPredicted RBP16.3■□□□□ 0.2
LINC00839-201ENST00000424751 COA7Q96BR5 231 aa16.3■□□□□ 0.2
LINC00839-201ENST00000424751 CLIC6Q96NY7 704 aa16.3■□□□□ 0.2
LINC00839-201ENST00000424751 RCOR1Q9UKL0 485 aa16.3■□□□□ 0.2
LINC00839-201ENST00000424751 PCDHA7Q9UN72 937 aa16.3■□□□□ 0.2
LINC00839-201ENST00000424751 ICA1Q05084 483 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms