RNA–Protein interactions for RNA: ENST00000341360.6

ATP2B4-201, Transcript of ATPase plasma membrane Ca2+ transporting 4, humanhuman

TSL 1 (best) BASIC

Gene ATP2B4, Length 4,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B4-201ENST00000341360 BCL2L12Q9HB09 334 aa8.53□□□□□ -1.04
ATP2B4-201ENST00000341360 PNMA3Q9UL41 463 aa8.53□□□□□ -1.04
ATP2B4-201ENST00000341360 CTNND2Q9UQB3 1225 aa8.53□□□□□ -1.04
ATP2B4-201ENST00000341360 ZCCHC11Q5TAX3 1644 aaKnown RBP8.53□□□□□ -1.04
ATP2B4-201ENST00000341360 HEG1Q9ULI3 1381 aa8.53□□□□□ -1.04
ATP2B4-201ENST00000341360 PNMA6EA0A0J9YXQ4 647 aa8.52□□□□□ -1.05
ATP2B4-201ENST00000341360 BTDP43251 543 aa8.52□□□□□ -1.05
ATP2B4-201ENST00000341360 SEPT2Q15019 361 aa8.52□□□□□ -1.05
ATP2B4-201ENST00000341360 ZNF569Q5MCW4 686 aa8.52□□□□□ -1.05
ATP2B4-201ENST00000341360 FOXP4Q8IVH2 680 aaPredicted RBP8.52□□□□□ -1.05
ATP2B4-201ENST00000341360 PCDHA12Q9UN75 941 aa8.52□□□□□ -1.05
ATP2B4-201ENST00000341360 GOLGA8CPA6NN73 597 aa8.52□□□□□ -1.05
ATP2B4-201ENST00000341360 SERPINB2P05120 415 aa8.52□□□□□ -1.05
ATP2B4-201ENST00000341360 CFAP157Q5JU67 520 aa8.52□□□□□ -1.05
ATP2B4-201ENST00000341360 FAM227BQ96M60 508 aa8.52□□□□□ -1.05
ATP2B4-201ENST00000341360 RUNDC3BQ96NL0 473 aa8.52□□□□□ -1.05
ATP2B4-201ENST00000341360 COA1Q9GZY4 146 aa8.52□□□□□ -1.05
ATP2B4-201ENST00000341360 NACA2Q9H009 215 aa8.52□□□□□ -1.05
ATP2B4-201ENST00000341360 MKRN1Q9UHC7 482 aaKnown RBP8.52□□□□□ -1.05
ATP2B4-201ENST00000341360 KLRF2D3W0D1 207 aa8.52□□□□□ -1.05
ATP2B4-201ENST00000341360 PRDM1O75626 825 aa8.52□□□□□ -1.05
ATP2B4-201ENST00000341360 GCNT3O95395 438 aa8.52□□□□□ -1.05
ATP2B4-201ENST00000341360 FDX1P10109 184 aa8.52□□□□□ -1.05
ATP2B4-201ENST00000341360 XRCC5P13010 732 aaKnown RBP8.52□□□□□ -1.05
ATP2B4-201ENST00000341360 RFX1P22670 979 aa8.52□□□□□ -1.05
ATP2B4-201ENST00000341360 COPB2P35606 906 aa8.52□□□□□ -1.05
ATP2B4-201ENST00000341360 GJC1P36383 396 aa8.52□□□□□ -1.05
ATP2B4-201ENST00000341360 STAT1P42224 750 aa8.52□□□□□ -1.05
ATP2B4-201ENST00000341360 SFMBT2Q5VUG0 894 aa8.52□□□□□ -1.05
ATP2B4-201ENST00000341360 IFT20Q8IY31 132 aa8.52□□□□□ -1.05
ATP2B4-201ENST00000341360 ANKRD35Q8N283 1001 aa8.52□□□□□ -1.05
ATP2B4-201ENST00000341360 SAMD15Q9P1V8 674 aa8.52□□□□□ -1.05
ATP2B4-201ENST00000341360 HESX1Q9UBX0 185 aa8.52□□□□□ -1.05
ATP2B4-201ENST00000341360 UTP11Q9Y3A2 253 aaKnown RBP8.52□□□□□ -1.05
ATP2B4-201ENST00000341360 NOC2LQ9Y3T9 749 aaKnown RBP8.52□□□□□ -1.05
ATP2B4-201ENST00000341360 GTPBP6O43824 516 aaPredicted RBP8.51□□□□□ -1.05
ATP2B4-201ENST00000341360 GADD45BO75293 160 aaPredicted RBP8.51□□□□□ -1.05
ATP2B4-201ENST00000341360 MAGEA1P43355 309 aa8.51□□□□□ -1.05
ATP2B4-201ENST00000341360 SURF1Q15526 300 aa8.51□□□□□ -1.05
ATP2B4-201ENST00000341360 HADHQ16836 314 aaKnown RBP8.51□□□□□ -1.05
ATP2B4-201ENST00000341360 DPH6Q7L8W6 267 aa8.51□□□□□ -1.05
ATP2B4-201ENST00000341360 SECISBP2LQ93073 1101 aaKnown RBP8.51□□□□□ -1.05
ATP2B4-201ENST00000341360 TRIM11Q96F44 468 aa8.51□□□□□ -1.05
ATP2B4-201ENST00000341360 BZW2Q9Y6E2 419 aaKnown RBP8.51□□□□□ -1.05
ATP2B4-201ENST00000341360 TNKSO95271 1327 aa8.51□□□□□ -1.05
ATP2B4-201ENST00000341360 RXRAP19793 462 aa8.51□□□□□ -1.05
ATP2B4-201ENST00000341360 MXRA7P84157 204 aa8.51□□□□□ -1.05
ATP2B4-201ENST00000341360 KLHL30Q0D2K2 578 aa8.51□□□□□ -1.05
ATP2B4-201ENST00000341360 CUL4BQ13620 913 aa8.51□□□□□ -1.05
ATP2B4-201ENST00000341360 USPL1Q5W0Q7 1092 aa8.51□□□□□ -1.05
ATP2B4-201ENST00000341360 HDXQ7Z353 690 aa8.51□□□□□ -1.05
ATP2B4-201ENST00000341360 P3H4Q92791 437 aa8.51□□□□□ -1.05
ATP2B4-201ENST00000341360 OVOS2A0A0G2JMS6 1433 aa8.51□□□□□ -1.05
ATP2B4-201ENST00000341360 OVOS2A0A0J9YW53 1432 aa8.51□□□□□ -1.05
ATP2B4-201ENST00000341360 OVOS2Q6IE36 1432 aa8.51□□□□□ -1.05
ATP2B4-201ENST00000341360 CDC42BPGQ6DT37 1551 aa8.51□□□□□ -1.05
ATP2B4-201ENST00000341360 MYO3AQ8NEV4 1616 aa8.51□□□□□ -1.05
ATP2B4-201ENST00000341360 TMEM110-MUSTN1A8MSY1 372 aa8.51□□□□□ -1.05
ATP2B4-201ENST00000341360 TTLL1O95922 423 aa8.51□□□□□ -1.05
ATP2B4-201ENST00000341360 HARSP12081 509 aaKnown RBP8.51□□□□□ -1.05
ATP2B4-201ENST00000341360 FANCCQ00597 558 aa8.51□□□□□ -1.05
ATP2B4-201ENST00000341360 RETREG2Q8NC44 543 aa8.51□□□□□ -1.05
ATP2B4-201ENST00000341360 RAB17Q9H0T7 212 aa8.51□□□□□ -1.05
ATP2B4-201ENST00000341360 ZSWIM6Q9HCJ5 1215 aa8.51□□□□□ -1.05
ATP2B4-201ENST00000341360 C1orf112Q9NSG2 853 aa8.51□□□□□ -1.05
ATP2B4-201ENST00000341360 CTTNBP2NLQ9P2B4 639 aa8.51□□□□□ -1.05
ATP2B4-201ENST00000341360 METP08581 1390 aa8.51□□□□□ -1.05
ATP2B4-201ENST00000341360 GLI2P10070 1586 aa8.51□□□□□ -1.05
ATP2B4-201ENST00000341360 PPFIA3O75145 1194 aa8.51□□□□□ -1.05
ATP2B4-201ENST00000341360 CD19P15391 556 aa8.51□□□□□ -1.05
ATP2B4-201ENST00000341360 CMA1P23946 247 aa8.51□□□□□ -1.05
ATP2B4-201ENST00000341360 GTF2F1P35269 517 aaKnown RBP eCLIP8.51□□□□□ -1.05
ATP2B4-201ENST00000341360 KRT9P35527 623 aa8.51□□□□□ -1.05
ATP2B4-201ENST00000341360 IREB2P48200 963 aaKnown RBP8.51□□□□□ -1.05
ATP2B4-201ENST00000341360 KMT5BQ4FZB7 885 aa8.51□□□□□ -1.05
ATP2B4-201ENST00000341360 ZMYM1Q5SVZ6 1142 aa8.51□□□□□ -1.05
ATP2B4-201ENST00000341360 C8orf74Q6P047 294 aa8.51□□□□□ -1.05
ATP2B4-201ENST00000341360 SND1Q7KZF4 910 aaKnown RBP eCLIP8.51□□□□□ -1.052e-7■■■■□ 23.5
ATP2B4-201ENST00000341360 GRK7Q8WTQ7 553 aa8.51□□□□□ -1.05
ATP2B4-201ENST00000341360 CFAP57Q96MR6 1250 aa8.51□□□□□ -1.05
ATP2B4-201ENST00000341360 ARMCX3Q9UH62 379 aaPredicted RBP8.51□□□□□ -1.05
ATP2B4-201ENST00000341360 JAG2Q9Y219 1238 aa8.51□□□□□ -1.05
ATP2B4-201ENST00000341360 A0A1W2PQ27 194 aa8.5□□□□□ -1.05
ATP2B4-201ENST00000341360 A0A1W2PQ64 194 aa8.5□□□□□ -1.05
ATP2B4-201ENST00000341360 A0A1W2PQD8 194 aa8.5□□□□□ -1.05
ATP2B4-201ENST00000341360 EIF3CLB5ME19 914 aaKnown RBP8.5□□□□□ -1.05
ATP2B4-201ENST00000341360 LIG4P49917 911 aa8.5□□□□□ -1.05
ATP2B4-201ENST00000341360 ZNF75DP51815 510 aa8.5□□□□□ -1.05
ATP2B4-201ENST00000341360 TCP10Q12799 353 aa8.5□□□□□ -1.05
ATP2B4-201ENST00000341360 CCDC6Q16204 474 aa8.5□□□□□ -1.05
ATP2B4-201ENST00000341360 SLC27A3Q5K4L6 730 aa8.5□□□□□ -1.05
ATP2B4-201ENST00000341360 ARHGAP27Q6ZUM4 889 aa8.5□□□□□ -1.05
ATP2B4-201ENST00000341360 BBOF1Q8ND07 529 aa8.5□□□□□ -1.05
ATP2B4-201ENST00000341360 GSDMBQ8TAX9 411 aa8.5□□□□□ -1.05
ATP2B4-201ENST00000341360 CSRNP1Q96S65 589 aa8.5□□□□□ -1.05
ATP2B4-201ENST00000341360 EIF3CQ99613 913 aaKnown RBP8.5□□□□□ -1.05
ATP2B4-201ENST00000341360 FOXP1Q9H334 677 aaPredicted RBP8.5□□□□□ -1.05
ATP2B4-201ENST00000341360 PLCB1Q9NQ66 1216 aa8.5□□□□□ -1.05
ATP2B4-201ENST00000341360 SPTLC3Q9NUV7 552 aa8.5□□□□□ -1.05
ATP2B4-201ENST00000341360 STK17AQ9UEE5 414 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms