RNA–Protein interactions for RNA: ENSMUST00000111051.9

Bdnf-210, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 4,125 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-210ENSMUST00000111051 SfpqQ8VIJ6 699 aaKnown RBP9.32□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Vnn1Q9Z0K8 512 aa9.32□□□□□ -0.92
Bdnf-210ENSMUST00000111051 SufuQ9Z0P7 484 aa9.32□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Gm5935Q497S0 212 aa9.32□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Ccdc189Q6NZQ0 333 aa9.32□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Osbpl1aQ91XL9 950 aa9.32□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Fnbp4Q6ZQ03 1031 aa9.32□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Armcx3Q8BHS6 379 aa9.32□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Rapgef3Q8VCC8 918 aa9.32□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Zkscan3Q91VW9 553 aa9.32□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Calr3Q9D9Q6 380 aa9.32□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Prr5lA2AVJ5 370 aa9.31□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Apol7aB2RT54 418 aa9.31□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Tex13cD3YU32 604 aa9.31□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Sema3fO88632 785 aa9.31□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Ddb1Q3U1J4 1140 aaKnown RBP9.31□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Edrf1Q6GQV7 1239 aa9.31□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Q8K2W9 541 aa9.31□□□□□ -0.92
Bdnf-210ENSMUST00000111051 E2f4Q8R0K9 410 aa9.31□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Synpo2Q91YE8 1087 aaKnown RBP9.31□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Shank2Q80Z38 1476 aa9.31□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Krt78E9Q0F0 1068 aa9.31□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Snx12O70493 165 aa9.31□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Tpp1O89023 562 aa9.31□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Parp1P11103 1013 aaKnown RBP9.31□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Vsnl1P62761 191 aa9.31□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Znf667Q2TL60 609 aa9.31□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Skap1Q3UUV5 355 aa9.31□□□□□ -0.92
Bdnf-210ENSMUST00000111051 EsrrbQ61539 433 aa9.31□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Ddx3yQ62095 658 aaKnown RBP9.31□□□□□ -0.92
Bdnf-210ENSMUST00000111051 KaznQ69ZS8 779 aa9.31□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Usp49Q6P9L4 685 aa9.31□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Q8C5C9 218 aa9.31□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Lrrc59Q922Q8 307 aaKnown RBP9.31□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Arpp21Q9DCB4 807 aa9.31□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Itga2bQ9QUM0 1033 aa9.31□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Prpf40aQ9R1C7 953 aaKnown RBP9.31□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Col20a1Q923P0 1320 aa9.31□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Itsn1Q9Z0R4 1714 aa9.31□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Spocd1B1ASB6 936 aa9.31□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Rfc1P35601 1131 aa9.31□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Stim2P83093 746 aa9.31□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Armc2Q3URY6 854 aa9.31□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Lrrc43Q3V0L5 667 aa9.31□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Olfr121Q5CZY0 321 aa9.31□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Igf2bp2Q5SF07 592 aaKnown RBP9.31□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Sik1Q60670 779 aa9.31□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Rhpn1Q61085 643 aa9.31□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Recql4Q75NR7 1216 aaKnown RBP9.31□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Adcy2Q80TL1 1090 aa9.31□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Slc51bQ80WK2 128 aa9.31□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Slitrk3Q810B9 980 aa9.31□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Ift74Q8BKE9 600 aa9.31□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Iffo1Q8BXL9 562 aa9.31□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Atp6v0a4Q920R6 833 aa9.31□□□□□ -0.92
Bdnf-210ENSMUST00000111051 LrmpQ60664 539 aa9.3□□□□□ -0.92
Bdnf-210ENSMUST00000111051 GypcQ78HU7 95 aa9.3□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Nop53Q8BK35 484 aaKnown RBP9.3□□□□□ -0.92
Bdnf-210ENSMUST00000111051 HdlbpQ8VDJ3 1268 aaKnown RBP9.3□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Rsrc2A2RTL5 376 aaKnown RBP9.3□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Stox1B2RQL2 990 aa9.3□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Il7P10168 154 aa9.3□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Gm5169Q5M8P2 212 aa9.3□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Gbp4Q61107 620 aa9.3□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Nap1l4Q78ZA7 375 aaKnown RBP9.3□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Galnt17Q7TT15 598 aa9.3□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Rexo1Q7TT28 1213 aa9.3□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Rcor2Q8C796 523 aa9.3□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Zranb2Q9R020 330 aaKnown RBP9.3□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Trpm3Q5F4S9 1721 aa9.3□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Cetn3O35648 167 aa9.3□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Dynll1P63168 89 aa9.3□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Eif3j1Q3UGC7 261 aaKnown RBP9.3□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Npdc1Q64322 332 aa9.3□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Eif3j2Q66JS6 263 aa9.3□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Ttll4Q80UG8 1193 aa9.3□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Prkag3Q8BGM7 489 aa9.3□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Vipas39Q8BGQ1 491 aa9.3□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Asic2Q925H0 512 aa9.3□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Glrx3Q9CQM9 337 aa9.3□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Q9D5Q8 446 aa9.3□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Tube1Q9D6T1 475 aa9.3□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Arl6ip4Q9JM93 229 aa9.3□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Otud7bB2RUR8 840 aa9.29□□□□□ -0.92
Bdnf-210ENSMUST00000111051 E9QMW4 1145 aa9.29□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Kifc2O08672 792 aa9.29□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Rps6ka1P18653 724 aa9.29□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Ca8P28651 291 aa9.29□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Map2k1P31938 393 aa9.29□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Grin1P35438 938 aa9.29□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Cacna2d4Q5RJF7 1116 aa9.29□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Tmem63cQ8CBX0 802 aa9.29□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Stn1Q8K2X3 378 aa9.29□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Dbndd2Q9CRD4 158 aa9.29□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Rgs22G3UYX5 1258 aa9.29□□□□□ -0.92
Bdnf-210ENSMUST00000111051 GpiP06745 558 aaKnown RBP9.29□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Krt86P97861 486 aa9.29□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Sox13Q04891 613 aa9.29□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Q3TYL0 343 aa9.29□□□□□ -0.92
Bdnf-210ENSMUST00000111051 Tbx2Q60707 711 aa9.29□□□□□ -0.92
Retrieved 100 of 22,080 RNA–protein pairs in 15.6 ms