RNA–Protein interactions for RNA: YPL065W

VPS28, Transcript of Component of the ESCRT-I complex, yeastyeast

Gene VPS28, Length 729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS28YPL065W YBR085C-AO43137 85 aa5.04□□□□□ -1.6
VPS28YPL065W RPL19AP0CX82 189 aaKnown RBP5.04□□□□□ -1.6
VPS28YPL065W RPL19BP0CX83 189 aaPredicted RBP5.04□□□□□ -1.6
VPS28YPL065W CDC15P27636 974 aa5.04□□□□□ -1.6
VPS28YPL065W AAP1P37898 856 aaKnown RBP5.04□□□□□ -1.6
VPS28YPL065W CCT4P39078 528 aaKnown RBP5.04□□□□□ -1.6
VPS28YPL065W AAD10P47182 288 aa5.04□□□□□ -1.6
VPS28YPL065W DUO1P53168 247 aaKnown RBP5.04□□□□□ -1.6
VPS28YPL065W RSM28Q03430 361 aa5.04□□□□□ -1.6
VPS28YPL065W RIX7Q07844 837 aaKnown RBP5.04□□□□□ -1.6
VPS28YPL065W ATX2Q12067 313 aa5.04□□□□□ -1.6
VPS28YPL065W PET111P08468 800 aa5.03□□□□□ -1.6
VPS28YPL065W RPN12P32496 274 aa5.03□□□□□ -1.6
VPS28YPL065W SOF1P33750 489 aaKnown RBP5.03□□□□□ -1.6
VPS28YPL065W LHS1P36016 881 aa5.03□□□□□ -1.6
VPS28YPL065W SCO2P38072 301 aa5.03□□□□□ -1.6
VPS28YPL065W SEC31P38968 1273 aaKnown RBP5.03□□□□□ -1.6
VPS28YPL065W LYS20P48570 428 aaKnown RBP5.03□□□□□ -1.6
VPS28YPL065W GET3Q12154 354 aaKnown RBP5.03□□□□□ -1.6
VPS28YPL065W UBX3Q12229 455 aa5.03□□□□□ -1.6
VPS28YPL065W YER145C-AA0A023PYF4 145 aa5.02□□□□□ -1.61
VPS28YPL065W SEM1O94742 89 aa5.02□□□□□ -1.61
VPS28YPL065W IMP2'P32351 346 aa5.02□□□□□ -1.61
VPS28YPL065W ECM10P39987 644 aa5.02□□□□□ -1.61
VPS28YPL065W MRX1P40050 688 aa5.02□□□□□ -1.61
VPS28YPL065W SKG3Q06315 1026 aa5.02□□□□□ -1.61
VPS28YPL065W MED1Q12321 566 aa5.02□□□□□ -1.61
VPS28YPL065W YBR126W-AQ8TGU7 68 aa5.02□□□□□ -1.61
VPS28YPL065W YCK1P23291 538 aa5.01□□□□□ -1.61
VPS28YPL065W RTS1P38903 757 aa5.01□□□□□ -1.61
VPS28YPL065W LYS4P49367 693 aaPredicted RBP5.01□□□□□ -1.61
VPS28YPL065W ORC5P50874 479 aa5.01□□□□□ -1.61
VPS28YPL065W PFA4Q12006 378 aa5.01□□□□□ -1.61
VPS28YPL065W PUF2Q12221 1075 aaKnown RBP RIP-Chip data5.01□□□□□ -1.61not detected
VPS28YPL065W CHO1P08456 276 aa5□□□□□ -1.61
VPS28YPL065W PRE8P23639 250 aa5□□□□□ -1.61
VPS28YPL065W YCR006CP25350 157 aa5□□□□□ -1.61
VPS28YPL065W MSS51P32335 436 aa5□□□□□ -1.61
VPS28YPL065W MAL33P38157 468 aa5□□□□□ -1.61
VPS28YPL065W MAF1P41910 395 aa5□□□□□ -1.61
VPS28YPL065W YFR020WP43600 232 aa5□□□□□ -1.61
VPS28YPL065W NGL3Q03210 505 aa5□□□□□ -1.61
VPS28YPL065W PDR8Q06149 701 aa5□□□□□ -1.61
VPS28YPL065W YOL159CQ08300 171 aa5□□□□□ -1.61
VPS28YPL065W YPT1P01123 206 aaKnown RBP4.99□□□□□ -1.61
VPS28YPL065W MRP2P10663 115 aaPredicted RBP4.99□□□□□ -1.61
VPS28YPL065W HSC82P15108 705 aaKnown RBP4.99□□□□□ -1.61
VPS28YPL065W KAR3P17119 729 aa4.99□□□□□ -1.61
VPS28YPL065W NDE1P40215 560 aa4.99□□□□□ -1.61
VPS28YPL065W CTK2P46962 323 aa4.99□□□□□ -1.61
VPS28YPL065W INA17Q02888 182 aa4.99□□□□□ -1.61
VPS28YPL065W PFA5Q03289 374 aa4.99□□□□□ -1.61
VPS28YPL065W IMH1Q06704 911 aaKnown RBP4.99□□□□□ -1.61
VPS28YPL065W GRS2Q06817 618 aa4.99□□□□□ -1.61
VPS28YPL065W TCO89Q08921 799 aa4.99□□□□□ -1.61
VPS28YPL065W HUA2Q12134 243 aa4.99□□□□□ -1.61
VPS28YPL065W GAL4P04386 881 aa4.98□□□□□ -1.61
VPS28YPL065W GPA1P08539 472 aa4.98□□□□□ -1.61
VPS28YPL065W MET8P15807 274 aa4.98□□□□□ -1.61
VPS28YPL065W YBL029WP38201 376 aa4.98□□□□□ -1.61
VPS28YPL065W BUR6P40096 142 aa4.98□□□□□ -1.61
VPS28YPL065W RPS7BP48164 190 aaKnown RBP4.98□□□□□ -1.61
VPS28YPL065W YLR455WQ06188 304 aa4.98□□□□□ -1.61
VPS28YPL065W DSE3Q08729 430 aa4.98□□□□□ -1.61
VPS28YPL065W HXK2P04807 486 aaKnown RBP4.97□□□□□ -1.61
VPS28YPL065W POL4P25615 582 aa4.97□□□□□ -1.61
VPS28YPL065W OCT1P35999 772 aa4.97□□□□□ -1.61
VPS28YPL065W MNN2P38069 597 aa4.97□□□□□ -1.61
VPS28YPL065W ARN1P38731 627 aa4.97□□□□□ -1.61
VPS28YPL065W YJL107CP42947 387 aa4.97□□□□□ -1.61
VPS28YPL065W DSD1P53095 428 aa4.97□□□□□ -1.61
VPS28YPL065W LCL3P53153 274 aa4.97□□□□□ -1.61
VPS28YPL065W PSR1Q07800 427 aa4.97□□□□□ -1.61
VPS28YPL065W MCH4Q08268 501 aa4.97□□□□□ -1.61
VPS28YPL065W YLR049CQ12110 428 aa4.97□□□□□ -1.61
VPS28YPL065W ATG9Q12142 997 aa4.97□□□□□ -1.61
VPS28YPL065W OLE1P21147 510 aaKnown RBP4.96□□□□□ -1.62
VPS28YPL065W PWP1P21304 576 aaKnown RBP4.96□□□□□ -1.62
VPS28YPL065W SGF29P25554 259 aa4.96□□□□□ -1.62
VPS28YPL065W PDB1P32473 366 aaKnown RBP4.96□□□□□ -1.62
VPS28YPL065W SAC6P32599 642 aaKnown RBP4.96□□□□□ -1.62
VPS28YPL065W AUR1P36107 401 aaPredicted RBP4.96□□□□□ -1.62
VPS28YPL065W GND1P38720 489 aaKnown RBP4.96□□□□□ -1.62
VPS28YPL065W RPN11P43588 306 aaKnown RBP4.96□□□□□ -1.62
VPS28YPL065W TIM10P87108 93 aa4.96□□□□□ -1.62
VPS28YPL065W SEC53P07283 254 aaKnown RBP4.95□□□□□ -1.62
VPS28YPL065W TKL1P23254 680 aaKnown RBP4.95□□□□□ -1.62
VPS28YPL065W CNA1P23287 553 aa4.95□□□□□ -1.62
VPS28YPL065W YIL152WP40455 235 aa4.95□□□□□ -1.62
VPS28YPL065W ESL1P40456 1118 aa4.95□□□□□ -1.62
VPS28YPL065W DPB11P47027 764 aaPredicted RBP4.95□□□□□ -1.62
VPS28YPL065W IST1P53843 298 aaPredicted RBP4.95□□□□□ -1.62
VPS28YPL065W MDM1Q01846 1127 aa4.95□□□□□ -1.62
VPS28YPL065W PIG1Q06216 648 aa4.95□□□□□ -1.62
VPS28YPL065W SDH5Q08230 162 aa4.95□□□□□ -1.62
VPS28YPL065W FRE3Q08905 711 aa4.95□□□□□ -1.62
VPS28YPL065W SPE4Q12455 300 aa4.95□□□□□ -1.62
VPS28YPL065W RRI1Q12468 440 aa4.95□□□□□ -1.62
VPS28YPL065W YBR225WP38321 900 aa4.94□□□□□ -1.62
VPS28YPL065W YNG2P38806 282 aaKnown RBP4.94□□□□□ -1.62
Retrieved 100 of 5,963 RNA–protein pairs in 11.7 ms