RNA–Protein interactions for RNA: YOR075W

UFE1, Transcript of t-SNARE protein required for retrograde vesicular traffic, yeast

Gene UFE1, Length 1,041 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UFE1	YOR075W	YLR112W	Q12130	139 aa		4.14	□□□□□ -1.75
UFE1	YOR075W	YOL087C	Q99247	1116 aa		4.14	□□□□□ -1.75
UFE1	YOR075W	SLZ1	P40167	298 aa		4.13	□□□□□ -1.75
UFE1	YOR075W	SEC24	P40482	926 aa	Known RBP	4.13	□□□□□ -1.75
UFE1	YOR075W	INA17	Q02888	182 aa		4.13	□□□□□ -1.75
UFE1	YOR075W	IZH1	Q03419	316 aa		4.13	□□□□□ -1.75
UFE1	YOR075W	NUP53	Q03790	475 aa		4.13	□□□□□ -1.75
UFE1	YOR075W	UTP21	Q06078	939 aa	Predicted RBP	4.13	□□□□□ -1.75
UFE1	YOR075W	MCP2	Q06567	569 aa		4.13	□□□□□ -1.75
UFE1	YOR075W	OPY2	Q06810	360 aa		4.13	□□□□□ -1.75
UFE1	YOR075W	SNA4	Q07549	140 aa		4.13	□□□□□ -1.75
UFE1	YOR075W	SSH4	P32343	579 aa		4.12	□□□□□ -1.75
UFE1	YOR075W	ALY1	P36117	915 aa		4.12	□□□□□ -1.75
UFE1	YOR075W	MNN2	P38069	597 aa		4.12	□□□□□ -1.75
UFE1	YOR075W	KTR3	P38130	404 aa	Predicted RBP	4.12	□□□□□ -1.75
UFE1	YOR075W	FMP10	P40098	244 aa		4.12	□□□□□ -1.75
UFE1	YOR075W	VRG4	P40107	337 aa		4.12	□□□□□ -1.75
UFE1	YOR075W	DPB11	P47027	764 aa	Predicted RBP	4.12	□□□□□ -1.75
UFE1	YOR075W	SMC3	P47037	1230 aa		4.12	□□□□□ -1.75
UFE1	YOR075W	AAD10	P47182	288 aa		4.12	□□□□□ -1.75
UFE1	YOR075W	PIL1	P53252	339 aa	Known RBP	4.12	□□□□□ -1.75
UFE1	YOR075W	YTP1	P53584	459 aa		4.12	□□□□□ -1.75
UFE1	YOR075W	YMR178W	Q03219	274 aa	Known RBP	4.12	□□□□□ -1.75
UFE1	YOR075W	CTL1	Q03220	320 aa	Known RBP	4.12	□□□□□ -1.75
UFE1	YOR075W	ARP10	Q04549	284 aa		4.12	□□□□□ -1.75
UFE1	YOR075W	ARP9	Q05123	467 aa		4.12	□□□□□ -1.75
UFE1	YOR075W	YLR281C	Q05863	155 aa		4.12	□□□□□ -1.75
UFE1	YOR075W	SKG3	Q06315	1026 aa		4.12	□□□□□ -1.75
UFE1	YOR075W	SRL1	Q08673	210 aa		4.12	□□□□□ -1.75
UFE1	YOR075W	BUD7	Q08754	746 aa		4.12	□□□□□ -1.75
UFE1	YOR075W	FUM1	P08417	488 aa	Known RBP	4.11	□□□□□ -1.75
UFE1	YOR075W	RPL42A	P0CX27	106 aa	Known RBP	4.11	□□□□□ -1.75
UFE1	YOR075W	RPL42B	P0CX28	106 aa	Known RBP	4.11	□□□□□ -1.75
UFE1	YOR075W	ARC40	P38328	384 aa	Known RBP	4.11	□□□□□ -1.75
UFE1	YOR075W	RFC1	P38630	861 aa	Known RBP	4.11	□□□□□ -1.75
UFE1	YOR075W	LEU5	P38702	357 aa		4.11	□□□□□ -1.75
UFE1	YOR075W	DIA4	P38705	446 aa	Predicted RBP	4.11	□□□□□ -1.75
UFE1	YOR075W	YNG2	P38806	282 aa	Known RBP	4.11	□□□□□ -1.75
UFE1	YOR075W	UIP3	P39547	235 aa		4.11	□□□□□ -1.75
UFE1	YOR075W	YJR061W	P40355	935 aa		4.11	□□□□□ -1.75
UFE1	YOR075W	NNF2	P53253	936 aa		4.11	□□□□□ -1.75
UFE1	YOR075W	LSC1	P53598	329 aa	Known RBP	4.11	□□□□□ -1.75
UFE1	YOR075W	YNL181W	P53878	407 aa		4.11	□□□□□ -1.75
UFE1	YOR075W	CBK1	P53894	756 aa		4.11	□□□□□ -1.75
UFE1	YOR075W	YMR018W	Q04364	514 aa		4.11	□□□□□ -1.75
UFE1	YOR075W	YMR034C	Q05131	434 aa	Predicted RBP	4.11	□□□□□ -1.75
UFE1	YOR075W	ATG9	Q12142	997 aa		4.11	□□□□□ -1.75
UFE1	YOR075W	INP53	Q12271	1107 aa		4.11	□□□□□ -1.75
UFE1	YOR075W	YFL068W	P0CX99	160 aa		4.1	□□□□□ -1.75
UFE1	YOR075W	YLL066W-A	P0CY00	160 aa		4.1	□□□□□ -1.75
UFE1	YOR075W	YLL067W-A	P0CY01	160 aa		4.1	□□□□□ -1.75
UFE1	YOR075W	PDB1	P32473	366 aa	Known RBP	4.1	□□□□□ -1.75
UFE1	YOR075W	YKL050C	P35736	922 aa		4.1	□□□□□ -1.75
UFE1	YOR075W	ARC1	P46672	376 aa	Known RBP	4.1	□□□□□ -1.75
UFE1	YOR075W	SGF73	P53165	657 aa		4.1	□□□□□ -1.75
UFE1	YOR075W	YNL234W	P53857	426 aa		4.1	□□□□□ -1.75
UFE1	YOR075W	INN1	P53901	409 aa		4.1	□□□□□ -1.75
UFE1	YOR075W	APL4	Q12028	832 aa		4.1	□□□□□ -1.75
UFE1	YOR075W	CBP1	P07252	654 aa		4.09	□□□□□ -1.75
UFE1	YOR075W	YCR043C	P25361	127 aa		4.09	□□□□□ -1.75
UFE1	YOR075W	GAC1	P28006	793 aa		4.09	□□□□□ -1.75
UFE1	YOR075W	MIA40	P36046	403 aa		4.09	□□□□□ -1.75
UFE1	YOR075W	SNU114	P36048	1008 aa	Known RBP	4.09	□□□□□ -1.75
UFE1	YOR075W	STV1	P37296	890 aa		4.09	□□□□□ -1.75
UFE1	YOR075W	SIP4	P46954	829 aa		4.09	□□□□□ -1.75
UFE1	YOR075W	BSC5	P53755	489 aa		4.09	□□□□□ -1.75
UFE1	YOR075W	ESBP6	P53918	673 aa		4.09	□□□□□ -1.75
UFE1	YOR075W	PSR1	Q07800	427 aa		4.09	□□□□□ -1.75
UFE1	YOR075W	CDC24	P11433	854 aa	Predicted RBP	4.08	□□□□□ -1.76
UFE1	YOR075W	RPB8	P20436	146 aa		4.08	□□□□□ -1.76
UFE1	YOR075W	SPE2	P21182	396 aa		4.08	□□□□□ -1.76
UFE1	YOR075W	PRE8	P23639	250 aa		4.08	□□□□□ -1.76
UFE1	YOR075W	EDE1	P34216	1381 aa		4.08	□□□□□ -1.76
UFE1	YOR075W	DPH1	P40487	425 aa	Known RBP	4.08	□□□□□ -1.76
UFE1	YOR075W	TES1	P41903	349 aa	Known RBP	4.08	□□□□□ -1.76
UFE1	YOR075W	BET4	Q00618	327 aa		4.08	□□□□□ -1.76
UFE1	YOR075W	MAK10	Q02197	733 aa		4.08	□□□□□ -1.76
UFE1	YOR075W	RIX7	Q07844	837 aa	Known RBP	4.08	□□□□□ -1.76
UFE1	YOR075W	SKM1	Q12469	655 aa		4.08	□□□□□ -1.76
UFE1	YOR075W	NKP1	Q12493	238 aa		4.08	□□□□□ -1.76
UFE1	YOR075W	YPK3	P38070	525 aa		4.07	□□□□□ -1.76
UFE1	YOR075W	RKM3	P38222	552 aa		4.07	□□□□□ -1.76
UFE1	YOR075W	YIL169C	P40442	995 aa		4.07	□□□□□ -1.76
UFE1	YOR075W	HXT9	P40885	567 aa		4.07	□□□□□ -1.76
UFE1	YOR075W	IAH1	P41734	238 aa		4.07	□□□□□ -1.76
UFE1	YOR075W	MEP3	P53390	489 aa		4.07	□□□□□ -1.76
UFE1	YOR075W	ZDS2	P54786	942 aa		4.07	□□□□□ -1.76
UFE1	YOR075W	ENT4	Q07872	247 aa		4.07	□□□□□ -1.76
UFE1	YOR075W	YOL159C	Q08300	171 aa		4.07	□□□□□ -1.76
UFE1	YOR075W	LCB1	P25045	558 aa	Known RBP	4.06	□□□□□ -1.76
UFE1	YOR075W	MCM10	P32354	571 aa		4.06	□□□□□ -1.76
UFE1	YOR075W	AGP2	P38090	596 aa		4.06	□□□□□ -1.76
UFE1	YOR075W	EFM2	P38347	419 aa		4.06	□□□□□ -1.76
UFE1	YOR075W	MET30	P39014	640 aa		4.06	□□□□□ -1.76
UFE1	YOR075W	BUR6	P40096	142 aa		4.06	□□□□□ -1.76
UFE1	YOR075W	RPS7B	P48164	190 aa	Known RBP	4.06	□□□□□ -1.76
UFE1	YOR075W	TDA9	Q04545	1251 aa		4.06	□□□□□ -1.76
UFE1	YOR075W	YMR254C	Q04838	102 aa		4.06	□□□□□ -1.76
UFE1	YOR075W	YDL218W	Q07629	317 aa		4.06	□□□□□ -1.76
UFE1	YOR075W	PWP1	P21304	576 aa	Known RBP	4.05	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms