RNA–Protein interactions for RNA: YOR005C

DNL4, Transcript of DNA ligase required for nonhomologous end-joining (NHEJ), yeastyeast

Gene DNL4, Length 2,835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DNL4YOR005C YCR051WP25631 222 aa2.68□□□□□ -1.98
DNL4YOR005C MSS1P32559 526 aaPredicted RBP2.68□□□□□ -1.98
DNL4YOR005C RPN2P32565 945 aaKnown RBP2.68□□□□□ -1.98
DNL4YOR005C BCS1P32839 456 aa2.68□□□□□ -1.98
DNL4YOR005C KES1P35844 434 aaKnown RBP2.68□□□□□ -1.98
DNL4YOR005C UBP11P36026 717 aa2.68□□□□□ -1.98
DNL4YOR005C AUR1P36107 401 aaPredicted RBP2.68□□□□□ -1.98
DNL4YOR005C VID24P38263 362 aa2.68□□□□□ -1.98
DNL4YOR005C VPS41P38959 992 aa2.68□□□□□ -1.98
DNL4YOR005C CCT6P39079 546 aa2.68□□□□□ -1.98
DNL4YOR005C THI6P41835 540 aa2.68□□□□□ -1.98
DNL4YOR005C SKP2P42843 763 aa2.68□□□□□ -1.98
DNL4YOR005C LSB3P43603 459 aaKnown RBP2.68□□□□□ -1.98
DNL4YOR005C YGR054WP53235 642 aaKnown RBP2.68□□□□□ -1.98
DNL4YOR005C VPS62P53285 467 aa2.68□□□□□ -1.98
DNL4YOR005C RIA1P53893 1110 aa2.68□□□□□ -1.98
DNL4YOR005C VTI1Q04338 217 aa2.68□□□□□ -1.98
DNL4YOR005C ESC8Q08119 714 aa2.68□□□□□ -1.98
DNL4YOR005C BMS1Q08965 1183 aaKnown RBP2.68□□□□□ -1.98
DNL4YOR005C YPL150WQ12152 901 aa2.68□□□□□ -1.98
DNL4YOR005C NCB2Q92317 146 aa2.68□□□□□ -1.98
DNL4YOR005C FRS2P15625 503 aaKnown RBP2.67□□□□□ -1.98
DNL4YOR005C PET123P17558 318 aa2.67□□□□□ -1.98
DNL4YOR005C CLB3P24870 427 aa2.67□□□□□ -1.98
DNL4YOR005C MGM1P32266 881 aa2.67□□□□□ -1.98
DNL4YOR005C MAL33P38157 468 aa2.67□□□□□ -1.98
DNL4YOR005C REG2P38232 338 aa2.67□□□□□ -1.98
DNL4YOR005C YJL206CP39529 758 aa2.67□□□□□ -1.98
DNL4YOR005C YIL161WP40449 235 aaKnown RBP2.67□□□□□ -1.98
DNL4YOR005C IME4P41833 600 aa2.67□□□□□ -1.98
DNL4YOR005C SSU1P41930 458 aa2.67□□□□□ -1.98
DNL4YOR005C ZIM17P42844 174 aa2.67□□□□□ -1.98
DNL4YOR005C LYS4P49367 693 aaPredicted RBP2.67□□□□□ -1.98
DNL4YOR005C YGR066CP53242 292 aa2.67□□□□□ -1.98
DNL4YOR005C MAL13P53338 473 aa2.67□□□□□ -1.98
DNL4YOR005C OGG1P53397 376 aaPredicted RBP2.67□□□□□ -1.98
DNL4YOR005C ERG5P54781 538 aa2.67□□□□□ -1.98
DNL4YOR005C HOF1Q05080 669 aa2.67□□□□□ -1.98
DNL4YOR005C SWT1Q12104 458 aa2.67□□□□□ -1.98
DNL4YOR005C LYS21Q12122 440 aaKnown RBP2.67□□□□□ -1.98
DNL4YOR005C YDR215CQ12240 137 aa2.67□□□□□ -1.98
DNL4YOR005C NPC2Q12408 173 aa2.67□□□□□ -1.98
DNL4YOR005C YPT6Q99260 215 aa2.67□□□□□ -1.98
DNL4YOR005C STE12P13574 688 aa2.67□□□□□ -1.98
DNL4YOR005C THR1P17423 357 aaKnown RBP2.67□□□□□ -1.98
DNL4YOR005C MDH1P17505 334 aaKnown RBP RIP-Chip data2.67□□□□□ -1.98not detected
DNL4YOR005C TRX1P22217 103 aaKnown RBP2.67□□□□□ -1.98
DNL4YOR005C EMC1P25574 760 aa2.67□□□□□ -1.98
DNL4YOR005C POT1P27796 417 aaKnown RBP RIP-Chip data2.67□□□□□ -1.98not detected
DNL4YOR005C HSP104P31539 908 aaKnown RBP2.67□□□□□ -1.98
DNL4YOR005C SRB5P32585 307 aa2.67□□□□□ -1.98
DNL4YOR005C YEL043WP32618 956 aa2.67□□□□□ -1.98
DNL4YOR005C RAD24P32641 659 aa2.67□□□□□ -1.98
DNL4YOR005C UIP5P36137 443 aa2.67□□□□□ -1.98
DNL4YOR005C KTR3P38130 404 aaPredicted RBP2.67□□□□□ -1.98
DNL4YOR005C RFT1P38206 574 aaPredicted RBP2.67□□□□□ -1.98
DNL4YOR005C YHL017WP38745 532 aa2.67□□□□□ -1.98
DNL4YOR005C NUP60P39705 539 aa2.67□□□□□ -1.98
DNL4YOR005C VMA13P41807 478 aaKnown RBP2.67□□□□□ -1.98
DNL4YOR005C FYV8P46949 817 aaKnown RBP2.67□□□□□ -1.98
DNL4YOR005C YPT11P48559 417 aa2.67□□□□□ -1.98
DNL4YOR005C RFX1P48743 811 aa2.67□□□□□ -1.98
DNL4YOR005C GTB1Q04924 702 aa2.67□□□□□ -1.98
DNL4YOR005C TDA6Q06466 467 aa2.67□□□□□ -1.98
DNL4YOR005C ATG23Q06671 453 aa2.67□□□□□ -1.98
DNL4YOR005C KEL3Q08979 651 aaPredicted RBP2.67□□□□□ -1.98
DNL4YOR005C REX3Q12090 404 aa2.67□□□□□ -1.98
DNL4YOR005C PRS5Q12265 496 aaKnown RBP2.67□□□□□ -1.98
DNL4YOR005C YLR122CQ12312 125 aa2.67□□□□□ -1.98
DNL4YOR005C FRE6Q12473 712 aa2.67□□□□□ -1.98
DNL4YOR005C YOR019WQ99248 730 aa2.67□□□□□ -1.98
DNL4YOR005C CPR2P23285 205 aa2.66□□□□□ -1.98
DNL4YOR005C LRE1P25579 583 aaKnown RBP2.66□□□□□ -1.98
DNL4YOR005C YKT6P36015 200 aaKnown RBP2.66□□□□□ -1.98
DNL4YOR005C APE3P37302 537 aaKnown RBP2.66□□□□□ -1.98
DNL4YOR005C AAP1P37898 856 aaKnown RBP2.66□□□□□ -1.98
DNL4YOR005C FMO1P38866 432 aa2.66□□□□□ -1.98
DNL4YOR005C SGN1P40561 250 aaKnown RBP RIP-Chip data2.66□□□□□ -1.98not detected
DNL4YOR005C YJL055WP47044 245 aa2.66□□□□□ -1.98
DNL4YOR005C CTH1P47976 325 aa2.66□□□□□ -1.98
DNL4YOR005C OCA1P50946 238 aaPredicted RBP2.66□□□□□ -1.98
DNL4YOR005C YGL036WP53185 909 aaPredicted RBP2.66□□□□□ -1.98
DNL4YOR005C INA17Q02888 182 aa2.66□□□□□ -1.98
DNL4YOR005C ROT1Q03691 256 aa2.66□□□□□ -1.98
DNL4YOR005C GYL1Q04322 720 aa2.66□□□□□ -1.98
DNL4YOR005C CRF1Q04930 467 aa2.66□□□□□ -1.98
DNL4YOR005C DUS4Q06063 367 aa2.66□□□□□ -1.98
DNL4YOR005C MRD1Q06106 887 aaKnown RBP2.66□□□□□ -1.98
DNL4YOR005C FMP45Q07651 309 aa2.66□□□□□ -1.98
DNL4YOR005C TCO89Q08921 799 aa2.66□□□□□ -1.98
DNL4YOR005C YBR255C-AQ3E776 120 aa2.66□□□□□ -1.98
DNL4YOR005C SWI1P09547 1314 aa2.66□□□□□ -1.98
DNL4YOR005C URB1P34241 1764 aaKnown RBP2.66□□□□□ -1.98
DNL4YOR005C RPL22AP05749 121 aaKnown RBP2.66□□□□□ -1.98
DNL4YOR005C RPS24AP0CX31 135 aaKnown RBP2.66□□□□□ -1.98
DNL4YOR005C RPS24BP0CX32 135 aaKnown RBP2.66□□□□□ -1.98
DNL4YOR005C LAT1P12695 482 aaKnown RBP2.66□□□□□ -1.98
DNL4YOR005C GLK1P17709 500 aaKnown RBP2.66□□□□□ -1.98
DNL4YOR005C PRP28P23394 588 aa2.66□□□□□ -1.98
DNL4YOR005C SYN8P31377 255 aa2.66□□□□□ -1.98
Retrieved 100 of 5,963 RNA–protein pairs in 24.1 ms